RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 EN1Q05925 392 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-210ENST00000441703 XRN1Q8IZH2 1706 aaKnown RBP9.92□□□□□ -0.82
HDAC6-210ENST00000441703 LAMC1P11047 1609 aa9.92□□□□□ -0.82
HDAC6-210ENST00000441703 ORAI2Q96SN7 254 aa9.91□□□□□ -0.82
HDAC6-210ENST00000441703 NALCNQ8IZF0 1738 aa9.9□□□□□ -0.82
HDAC6-210ENST00000441703 PTPN23Q9H3S7 1636 aa9.9□□□□□ -0.82
HDAC6-210ENST00000441703 DAPK1P53355 1430 aa9.9□□□□□ -0.83
HDAC6-210ENST00000441703 NPHP3Q7Z494 1330 aa9.89□□□□□ -0.83
HDAC6-210ENST00000441703 PCGF6Q9BYE7 350 aa9.89□□□□□ -0.83
HDAC6-210ENST00000441703 SLIT2O94813 1529 aa9.88□□□□□ -0.83
HDAC6-210ENST00000441703 RGPD1P0DJD0 1748 aa9.88□□□□□ -0.83
HDAC6-210ENST00000441703 HAP1P54257 671 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-210ENST00000441703 C1QTNF8P60827 252 aa9.88□□□□□ -0.83
HDAC6-210ENST00000441703 PPARGC1BQ86YN6 1023 aaKnown RBP9.88□□□□□ -0.83
HDAC6-210ENST00000441703 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-210ENST00000441703 VPS8Q8N3P4 1428 aa9.88□□□□□ -0.83
HDAC6-210ENST00000441703 ANKRD30AQ9BXX3 1397 aa9.88□□□□□ -0.83
HDAC6-210ENST00000441703 NINLQ9Y2I6 1382 aa9.87□□□□□ -0.83
HDAC6-210ENST00000441703 VPS72Q15906 364 aa9.86□□□□□ -0.83
HDAC6-210ENST00000441703 EZH2Q15910 746 aaKnown RBP9.86□□□□□ -0.83
HDAC6-210ENST00000441703 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
HDAC6-210ENST00000441703 CHIC2Q9UKJ5 165 aa9.85□□□□□ -0.83
HDAC6-210ENST00000441703 METP08581 1390 aa9.85□□□□□ -0.83
HDAC6-210ENST00000441703 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
HDAC6-210ENST00000441703 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-210ENST00000441703 XPCQ01831 940 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-210ENST00000441703 SPON1Q9HCB6 807 aa9.84□□□□□ -0.83
HDAC6-210ENST00000441703 NRXN3Q9Y4C0 1643 aa9.84□□□□□ -0.83
HDAC6-210ENST00000441703 LRPPRCP42704 1394 aaKnown RBP9.84□□□□□ -0.83
HDAC6-210ENST00000441703 ADGRB2O60241 1585 aa9.84□□□□□ -0.83
HDAC6-210ENST00000441703 ZEB1P37275 1124 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-210ENST00000441703 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
HDAC6-210ENST00000441703 ZNF326Q5BKZ1 582 aaKnown RBP9.83□□□□□ -0.84
HDAC6-210ENST00000441703 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
HDAC6-210ENST00000441703 E9PCH4 1651 aa9.83□□□□□ -0.84
HDAC6-210ENST00000441703 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
HDAC6-210ENST00000441703 IQGAP3Q86VI3 1631 aa9.82□□□□□ -0.84
HDAC6-210ENST00000441703 USP32Q8NFA0 1604 aa9.82□□□□□ -0.84
HDAC6-210ENST00000441703 FOXO3O43524 673 aa9.82□□□□□ -0.84
HDAC6-210ENST00000441703 FAM98CQ17RN3 349 aaKnown RBP9.82□□□□□ -0.84
HDAC6-210ENST00000441703 KANK4Q5T7N3 995 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-210ENST00000441703 PXDNQ92626 1479 aa9.82□□□□□ -0.84
HDAC6-210ENST00000441703 CAMTA1Q9Y6Y1 1673 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 PARD3Q8TEW0 1356 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 NWD2Q9ULI1 1742 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 KCNQ2O43526 872 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 FAM182BQ5T319 152 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 ANKRD50Q9ULJ7 1429 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 PLCH1Q4KWH8 1693 aa9.8□□□□□ -0.84
HDAC6-210ENST00000441703 TNS1Q9HBL0 1735 aaKnown RBP9.79□□□□□ -0.84
HDAC6-210ENST00000441703 CAMKK2Q96RR4 588 aa9.79□□□□□ -0.84
HDAC6-210ENST00000441703 GIGYF1O75420 1035 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-210ENST00000441703 APBA3O96018 575 aa9.78□□□□□ -0.84
HDAC6-210ENST00000441703 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
HDAC6-210ENST00000441703 ROBO2Q9HCK4 1378 aa9.77□□□□□ -0.84
HDAC6-210ENST00000441703 TRIM37O94972 964 aa9.77□□□□□ -0.85
HDAC6-210ENST00000441703 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
HDAC6-210ENST00000441703 CCDC144AA2RUR9 1427 aa9.75□□□□□ -0.85
HDAC6-210ENST00000441703 NUTM2FA1L443 756 aa9.75□□□□□ -0.85
HDAC6-210ENST00000441703 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
HDAC6-210ENST00000441703 FAM196AQ6ZSG2 479 aa9.75□□□□□ -0.85
HDAC6-210ENST00000441703 CABLES1Q8TDN4 633 aa9.75□□□□□ -0.85
HDAC6-210ENST00000441703 CDC42BPGQ6DT37 1551 aa9.75□□□□□ -0.85
HDAC6-210ENST00000441703 KRT28Q7Z3Y7 464 aa9.74□□□□□ -0.85
HDAC6-210ENST00000441703 CHD4Q14839 1912 aa9.74□□□□□ -0.85
HDAC6-210ENST00000441703 RREB1Q92766 1687 aa9.74□□□□□ -0.85
HDAC6-210ENST00000441703 PRAG1Q86YV5 1406 aa9.73□□□□□ -0.85
HDAC6-210ENST00000441703 NUP188Q5SRE5 1749 aa9.73□□□□□ -0.85
HDAC6-210ENST00000441703 PSME1Q06323 249 aa9.73□□□□□ -0.85
HDAC6-210ENST00000441703 BTG4Q9NY30 223 aa9.73□□□□□ -0.85
HDAC6-210ENST00000441703 TNS3Q68CZ2 1445 aa9.73□□□□□ -0.85
HDAC6-210ENST00000441703 KIF1AQ12756 1690 aa9.72□□□□□ -0.85
HDAC6-210ENST00000441703 TRIM26Q12899 539 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-210ENST00000441703 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
HDAC6-210ENST00000441703 NRKQ7Z2Y5 1582 aa9.71□□□□□ -0.85
HDAC6-210ENST00000441703 NRAPQ86VF7 1730 aa9.71□□□□□ -0.85
HDAC6-210ENST00000441703 FAM83GA6ND36 823 aa9.71□□□□□ -0.86
HDAC6-210ENST00000441703 SPATA31A5Q5VU36 1347 aa9.7□□□□□ -0.86
HDAC6-210ENST00000441703 SPATA31A7Q8IWB4 1347 aa9.7□□□□□ -0.86
HDAC6-210ENST00000441703 ARHGEF10O15013 1369 aa9.7□□□□□ -0.86
HDAC6-210ENST00000441703 NAIPQ13075 1403 aa9.7□□□□□ -0.86
HDAC6-210ENST00000441703 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
HDAC6-210ENST00000441703 THSD7AQ9UPZ6 1657 aa9.69□□□□□ -0.86
HDAC6-210ENST00000441703 PDE3BQ13370 1112 aa9.68□□□□□ -0.86
HDAC6-210ENST00000441703 KIF1BO60333 1816 aa9.68□□□□□ -0.86
HDAC6-210ENST00000441703 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
HDAC6-210ENST00000441703 NUP155O75694 1391 aa9.67□□□□□ -0.86
HDAC6-210ENST00000441703 ROCK1Q13464 1354 aa9.67□□□□□ -0.86
HDAC6-210ENST00000441703 VGFO15240 615 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-210ENST00000441703 ZBTB7AO95365 584 aa9.67□□□□□ -0.86
HDAC6-210ENST00000441703 MYOM1P52179 1685 aa9.67□□□□□ -0.86
HDAC6-210ENST00000441703 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
HDAC6-210ENST00000441703 RRBP1Q9P2E9 1410 aaKnown RBP9.66□□□□□ -0.86
HDAC6-210ENST00000441703 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
HDAC6-210ENST00000441703 APLP2Q06481 763 aa9.66□□□□□ -0.86
HDAC6-210ENST00000441703 FAM50AQ14320 339 aaKnown RBP9.66□□□□□ -0.86
HDAC6-210ENST00000441703 SYT17Q9BSW7 474 aa9.66□□□□□ -0.86
HDAC6-210ENST00000441703 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-210ENST00000441703 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms