RNA–Protein interactions for RNA: ENST00000441214.1

LINC01271-201, Transcript of long intergenic non-protein coding RNA 1271, humanhuman

TSL 1 (best) BASIC

Gene LINC01271, Length 2,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01271-201ENST00000441214 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
LINC01271-201ENST00000441214 TPM2P07951 284 aa18.07■□□□□ 0.48
LINC01271-201ENST00000441214 L1TD1Q5T7N2 865 aaKnown RBP18.07■□□□□ 0.48
LINC01271-201ENST00000441214 VGFO15240 615 aaPredicted RBP18.06■□□□□ 0.48
LINC01271-201ENST00000441214 MYOM2P54296 1465 aa18.06■□□□□ 0.48
LINC01271-201ENST00000441214 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
LINC01271-201ENST00000441214 RIMS2Q9UQ26 1411 aa18.05■□□□□ 0.48
LINC01271-201ENST00000441214 UBR1Q8IWV7 1749 aa18.05■□□□□ 0.48
LINC01271-201ENST00000441214 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
LINC01271-201ENST00000441214 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
LINC01271-201ENST00000441214 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
LINC01271-201ENST00000441214 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
LINC01271-201ENST00000441214 PTPRMP28827 1452 aa18.04■□□□□ 0.48
LINC01271-201ENST00000441214 RPGRIP1LQ68CZ1 1315 aa18.04■□□□□ 0.48
LINC01271-201ENST00000441214 MYO3AQ8NEV4 1616 aa18.03■□□□□ 0.48
LINC01271-201ENST00000441214 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
LINC01271-201ENST00000441214 STK26Q9P289 416 aa18.03■□□□□ 0.48
LINC01271-201ENST00000441214 KDM4FA0A1W2PPD8 638 aa18.02■□□□□ 0.48
LINC01271-201ENST00000441214 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.48
LINC01271-201ENST00000441214 LTKP29376 864 aa18.02■□□□□ 0.47
LINC01271-201ENST00000441214 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
LINC01271-201ENST00000441214 NRXN1Q9ULB1 1477 aa18■□□□□ 0.47
LINC01271-201ENST00000441214 MS4A1P11836 297 aa18■□□□□ 0.47
LINC01271-201ENST00000441214 CNGB1Q14028 1251 aaPredicted RBP18■□□□□ 0.47
LINC01271-201ENST00000441214 NLRP1Q9C000 1473 aa18■□□□□ 0.47
LINC01271-201ENST00000441214 SAFB2Q14151 953 aaKnown RBP eCLIP18■□□□□ 0.47
LINC01271-201ENST00000441214 TMEM2Q9UHN6 1383 aa17.99■□□□□ 0.47
LINC01271-201ENST00000441214 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
LINC01271-201ENST00000441214 STAC3Q96MF2 364 aa17.99■□□□□ 0.47
LINC01271-201ENST00000441214 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
LINC01271-201ENST00000441214 SMAP1Q8IYB5 467 aaPredicted RBP17.98■□□□□ 0.47
LINC01271-201ENST00000441214 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
LINC01271-201ENST00000441214 PAXIP1Q6ZW49 1069 aaPredicted RBP17.98■□□□□ 0.47
LINC01271-201ENST00000441214 GPRASP1Q5JY77 1395 aa17.98■□□□□ 0.47
LINC01271-201ENST00000441214 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
LINC01271-201ENST00000441214 MAP7D2Q96T17 732 aa17.97■□□□□ 0.47
LINC01271-201ENST00000441214 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
LINC01271-201ENST00000441214 BACH2Q9BYV9 841 aa17.96■□□□□ 0.47
LINC01271-201ENST00000441214 PDE4AP27815 886 aa17.96■□□□□ 0.47
LINC01271-201ENST00000441214 CHMP4BQ9H444 224 aaKnown RBP17.95■□□□□ 0.46
LINC01271-201ENST00000441214 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
LINC01271-201ENST00000441214 KIF7Q2M1P5 1343 aa17.94■□□□□ 0.46
LINC01271-201ENST00000441214 BRD2P25440 801 aaKnown RBP17.94■□□□□ 0.46
LINC01271-201ENST00000441214 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
LINC01271-201ENST00000441214 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
LINC01271-201ENST00000441214 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
LINC01271-201ENST00000441214 ALKQ9UM73 1620 aa17.93■□□□□ 0.46
LINC01271-201ENST00000441214 ASXL1Q8IXJ9 1541 aa17.93■□□□□ 0.46
LINC01271-201ENST00000441214 ADGRB1O14514 1584 aa17.93■□□□□ 0.46
LINC01271-201ENST00000441214 SCAF11Q99590 1463 aaKnown RBP17.92■□□□□ 0.46
LINC01271-201ENST00000441214 KIAA1210Q9ULL0 1709 aa17.92■□□□□ 0.46
LINC01271-201ENST00000441214 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
LINC01271-201ENST00000441214 HSPA2P54652 639 aa17.92■□□□□ 0.46
LINC01271-201ENST00000441214 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.92■□□□□ 0.46
LINC01271-201ENST00000441214 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
LINC01271-201ENST00000441214 TESK2Q96S53 571 aa17.91■□□□□ 0.46
LINC01271-201ENST00000441214 METP08581 1390 aa17.9■□□□□ 0.46
LINC01271-201ENST00000441214 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
LINC01271-201ENST00000441214 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
LINC01271-201ENST00000441214 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
LINC01271-201ENST00000441214 LAMC1P11047 1609 aa17.89■□□□□ 0.45
LINC01271-201ENST00000441214 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
LINC01271-201ENST00000441214 HDGFP51858 240 aaKnown RBP17.88■□□□□ 0.45
LINC01271-201ENST00000441214 KDM5AP29375 1690 aaKnown RBP17.88■□□□□ 0.45
LINC01271-201ENST00000441214 WAPLQ7Z5K2 1190 aa17.87■□□□□ 0.45
LINC01271-201ENST00000441214 NCKAP5LQ9HCH0 1330 aa17.86■□□□□ 0.45
LINC01271-201ENST00000441214 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
LINC01271-201ENST00000441214 PRAM1Q96QH2 718 aa17.86■□□□□ 0.45
LINC01271-201ENST00000441214 SLIT1O75093 1534 aa17.85■□□□□ 0.45
LINC01271-201ENST00000441214 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
LINC01271-201ENST00000441214 YTHDC2Q9H6S0 1430 aaKnown RBP17.85■□□□□ 0.45
LINC01271-201ENST00000441214 ZNF142P52746 1687 aaPredicted RBP17.84■□□□□ 0.45
LINC01271-201ENST00000441214 ADAMTS13Q76LX8 1427 aa17.84■□□□□ 0.45
LINC01271-201ENST00000441214 SETD1AO15047 1707 aaKnown RBP17.84■□□□□ 0.45
LINC01271-201ENST00000441214 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
LINC01271-201ENST00000441214 FRAT2O75474 233 aaPredicted RBP17.84■□□□□ 0.45
LINC01271-201ENST00000441214 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.45
LINC01271-201ENST00000441214 ANKLE2Q86XL3 938 aa17.83■□□□□ 0.45
LINC01271-201ENST00000441214 SMG6Q86US8 1419 aaKnown RBP17.83■□□□□ 0.45
LINC01271-201ENST00000441214 PLEKHG1Q9ULL1 1385 aa17.83■□□□□ 0.44
LINC01271-201ENST00000441214 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.44
LINC01271-201ENST00000441214 POGKQ9P215 609 aa17.83■□□□□ 0.44
LINC01271-201ENST00000441214 ARHGEF28Q8N1W1 1705 aaKnown RBP17.82■□□□□ 0.44
LINC01271-201ENST00000441214 TMF1P82094 1093 aa17.82■□□□□ 0.44
LINC01271-201ENST00000441214 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
LINC01271-201ENST00000441214 RBM33Q96EV2 1170 aaKnown RBP17.82■□□□□ 0.44
LINC01271-201ENST00000441214 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
LINC01271-201ENST00000441214 POLR1AO95602 1720 aaPredicted RBP17.8■□□□□ 0.44
LINC01271-201ENST00000441214 TERF1P54274 439 aa17.8■□□□□ 0.44
LINC01271-201ENST00000441214 MTERF4Q7Z6M4 381 aaKnown RBP17.79■□□□□ 0.44
LINC01271-201ENST00000441214 TEX2Q8IWB9 1127 aa17.78■□□□□ 0.44
LINC01271-201ENST00000441214 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
LINC01271-201ENST00000441214 CHRM1P11229 460 aaPredicted RBP17.76■□□□□ 0.43
LINC01271-201ENST00000441214 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
LINC01271-201ENST00000441214 AMOTL2Q9Y2J4 779 aa17.76■□□□□ 0.43
LINC01271-201ENST00000441214 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
LINC01271-201ENST00000441214 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
LINC01271-201ENST00000441214 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
LINC01271-201ENST00000441214 DMTNQ08495 405 aa17.74■□□□□ 0.43
LINC01271-201ENST00000441214 ESPNB1AK53 854 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms