RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 TECPR2O15040 1411 aa17.24■□□□□ 0.35
UBE2D4-204ENST00000440899 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
UBE2D4-204ENST00000440899 TMEM132EQ6IEE7 984 aa17.24■□□□□ 0.35
UBE2D4-204ENST00000440899 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
UBE2D4-204ENST00000440899 LAMC1P11047 1609 aa17.24■□□□□ 0.35
UBE2D4-204ENST00000440899 NGLY1Q96IV0 654 aa17.23■□□□□ 0.35
UBE2D4-204ENST00000440899 QTRT2Q9H974 415 aaKnown RBP17.23■□□□□ 0.35
UBE2D4-204ENST00000440899 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
UBE2D4-204ENST00000440899 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
UBE2D4-204ENST00000440899 CDK12Q9NYV4 1490 aaPredicted RBP17.22■□□□□ 0.35
UBE2D4-204ENST00000440899 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
UBE2D4-204ENST00000440899 CDC42BPGQ6DT37 1551 aa17.21■□□□□ 0.35
UBE2D4-204ENST00000440899 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-204ENST00000440899 UPF1Q92900 1129 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBE2D4-204ENST00000440899 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-204ENST00000440899 IFT172Q9UG01 1749 aa17.19■□□□□ 0.34
UBE2D4-204ENST00000440899 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
UBE2D4-204ENST00000440899 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
UBE2D4-204ENST00000440899 FOXO3O43524 673 aa17.18■□□□□ 0.34
UBE2D4-204ENST00000440899 RAB3GAP2Q9H2M9 1393 aa17.17■□□□□ 0.34
UBE2D4-204ENST00000440899 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
UBE2D4-204ENST00000440899 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
UBE2D4-204ENST00000440899 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
UBE2D4-204ENST00000440899 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
UBE2D4-204ENST00000440899 FNBP4Q8N3X1 1017 aaPredicted RBP17.15■□□□□ 0.34
UBE2D4-204ENST00000440899 USP21Q9UK80 565 aa17.15■□□□□ 0.34
UBE2D4-204ENST00000440899 PXDNQ92626 1479 aa17.14■□□□□ 0.33
UBE2D4-204ENST00000440899 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
UBE2D4-204ENST00000440899 XPCQ01831 940 aaPredicted RBP17.14■□□□□ 0.33
UBE2D4-204ENST00000440899 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
UBE2D4-204ENST00000440899 MYOM2P54296 1465 aa17.13■□□□□ 0.33
UBE2D4-204ENST00000440899 TRPC5Q9UL62 973 aaPredicted RBP17.13■□□□□ 0.33
UBE2D4-204ENST00000440899 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
UBE2D4-204ENST00000440899 RGS12O14924 1447 aa17.11■□□□□ 0.33
UBE2D4-204ENST00000440899 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
UBE2D4-204ENST00000440899 PRAM1Q96QH2 718 aa17.1■□□□□ 0.33
UBE2D4-204ENST00000440899 HRCP23327 699 aa17.09■□□□□ 0.33
UBE2D4-204ENST00000440899 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
UBE2D4-204ENST00000440899 SPATA31A3Q5VYP0 1347 aa17.09■□□□□ 0.33
UBE2D4-204ENST00000440899 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.32
UBE2D4-204ENST00000440899 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBE2D4-204ENST00000440899 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
UBE2D4-204ENST00000440899 POGKQ9P215 609 aa17.08■□□□□ 0.32
UBE2D4-204ENST00000440899 PSME1Q06323 249 aa17.07■□□□□ 0.32
UBE2D4-204ENST00000440899 ATRNO75882 1429 aa17.06■□□□□ 0.32
UBE2D4-204ENST00000440899 KDM2AQ9Y2K7 1162 aa17.06■□□□□ 0.32
UBE2D4-204ENST00000440899 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
UBE2D4-204ENST00000440899 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
UBE2D4-204ENST00000440899 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
UBE2D4-204ENST00000440899 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
UBE2D4-204ENST00000440899 DLC1Q96QB1 1528 aa17.04■□□□□ 0.32
UBE2D4-204ENST00000440899 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
UBE2D4-204ENST00000440899 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.32
UBE2D4-204ENST00000440899 SBNO1A3KN83 1393 aa17.02■□□□□ 0.31
UBE2D4-204ENST00000440899 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
UBE2D4-204ENST00000440899 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
UBE2D4-204ENST00000440899 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
UBE2D4-204ENST00000440899 ANKARQ7Z5J8 1434 aa17.01■□□□□ 0.31
UBE2D4-204ENST00000440899 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
UBE2D4-204ENST00000440899 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
UBE2D4-204ENST00000440899 PMFBP1Q8TBY8 1022 aa17■□□□□ 0.31
UBE2D4-204ENST00000440899 HIRIP3Q9BW71 556 aaPredicted RBP16.99■□□□□ 0.31
UBE2D4-204ENST00000440899 SLIT2O94813 1529 aa16.99■□□□□ 0.31
UBE2D4-204ENST00000440899 ARHGEF10O15013 1369 aa16.99■□□□□ 0.31
UBE2D4-204ENST00000440899 MARF1Q9Y4F3 1742 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-204ENST00000440899 MINK1Q8N4C8 1332 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-204ENST00000440899 EP400Q96L91 3159 aa16.98■□□□□ 0.31
UBE2D4-204ENST00000440899 RGPD8O14715 1765 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-204ENST00000440899 CABLES1Q8TDN4 633 aa16.98■□□□□ 0.31
UBE2D4-204ENST00000440899 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-204ENST00000440899 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-204ENST00000440899 ADGRB2O60241 1585 aa16.97■□□□□ 0.31
UBE2D4-204ENST00000440899 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
UBE2D4-204ENST00000440899 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
UBE2D4-204ENST00000440899 USP32Q8NFA0 1604 aa16.95■□□□□ 0.3
UBE2D4-204ENST00000440899 CCDC125Q86Z20 511 aa16.94■□□□□ 0.3
UBE2D4-204ENST00000440899 PRR36Q9H6K5 1346 aa16.94■□□□□ 0.3
UBE2D4-204ENST00000440899 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
UBE2D4-204ENST00000440899 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-204ENST00000440899 SRCAPQ6ZRS2 3230 aa16.93■□□□□ 0.3
UBE2D4-204ENST00000440899 VPS72Q15906 364 aa16.93■□□□□ 0.3
UBE2D4-204ENST00000440899 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-204ENST00000440899 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
UBE2D4-204ENST00000440899 FAM83GA6ND36 823 aa16.91■□□□□ 0.3
UBE2D4-204ENST00000440899 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-204ENST00000440899 GLI3P10071 1580 aa16.89■□□□□ 0.3
UBE2D4-204ENST00000440899 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
UBE2D4-204ENST00000440899 SEPT12Q8IYM1 358 aa16.89■□□□□ 0.29
UBE2D4-204ENST00000440899 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
UBE2D4-204ENST00000440899 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
UBE2D4-204ENST00000440899 CDK19Q9BWU1 502 aa16.87■□□□□ 0.29
UBE2D4-204ENST00000440899 BTG4Q9NY30 223 aa16.86■□□□□ 0.29
UBE2D4-204ENST00000440899 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
UBE2D4-204ENST00000440899 TRPM3Q9HCF6 1732 aaPredicted RBP16.86■□□□□ 0.29
UBE2D4-204ENST00000440899 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
UBE2D4-204ENST00000440899 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
UBE2D4-204ENST00000440899 ABCA3Q99758 1704 aa16.84■□□□□ 0.29
UBE2D4-204ENST00000440899 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
UBE2D4-204ENST00000440899 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
UBE2D4-204ENST00000440899 ATP7BP35670 1465 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 353.5 ms