RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 TMEM2Q9UHN6 1383 aa17.82■□□□□ 0.44
ACTN4-204ENST00000440400 SHPRHQ149N8 1683 aa17.81■□□□□ 0.44
ACTN4-204ENST00000440400 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
ACTN4-204ENST00000440400 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
ACTN4-204ENST00000440400 TRAK1Q9UPV9 953 aa17.81■□□□□ 0.44
ACTN4-204ENST00000440400 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
ACTN4-204ENST00000440400 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
ACTN4-204ENST00000440400 ANKRD36BQ8N2N9 1353 aa17.8■□□□□ 0.44
ACTN4-204ENST00000440400 CARD14Q9BXL6 1004 aa17.8■□□□□ 0.44
ACTN4-204ENST00000440400 EVC2Q86UK5 1308 aa17.79■□□□□ 0.44
ACTN4-204ENST00000440400 PLEKHG1Q9ULL1 1385 aa17.79■□□□□ 0.44
ACTN4-204ENST00000440400 KNSTRNQ9Y448 316 aa17.79■□□□□ 0.44
ACTN4-204ENST00000440400 ADAMTS13Q76LX8 1427 aa17.79■□□□□ 0.44
ACTN4-204ENST00000440400 NSD2O96028 1365 aa17.78■□□□□ 0.44
ACTN4-204ENST00000440400 FAM9BQ8IZU0 186 aa17.78■□□□□ 0.44
ACTN4-204ENST00000440400 TMC1Q8TDI8 760 aa17.78■□□□□ 0.44
ACTN4-204ENST00000440400 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
ACTN4-204ENST00000440400 KIF20BQ96Q89 1820 aa17.78■□□□□ 0.44
ACTN4-204ENST00000440400 TOPAZ1Q8N9V7 1692 aa17.78■□□□□ 0.44
ACTN4-204ENST00000440400 RIMS1Q86UR5 1692 aaKnown RBP17.76■□□□□ 0.43
ACTN4-204ENST00000440400 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
ACTN4-204ENST00000440400 ATAD2Q6PL18 1390 aa17.75■□□□□ 0.43
ACTN4-204ENST00000440400 MLECQ14165 292 aa17.75■□□□□ 0.43
ACTN4-204ENST00000440400 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
ACTN4-204ENST00000440400 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
ACTN4-204ENST00000440400 NSD3Q9BZ95 1437 aa17.75■□□□□ 0.43
ACTN4-204ENST00000440400 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
ACTN4-204ENST00000440400 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
ACTN4-204ENST00000440400 ATP7BP35670 1465 aa17.74■□□□□ 0.43
ACTN4-204ENST00000440400 CC2D1BQ5T0F9 858 aaKnown RBP17.73■□□□□ 0.43
ACTN4-204ENST00000440400 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
ACTN4-204ENST00000440400 CEP170BQ9Y4F5 1589 aaPredicted RBP17.73■□□□□ 0.43
ACTN4-204ENST00000440400 METP08581 1390 aa17.72■□□□□ 0.43
ACTN4-204ENST00000440400 HDGFP51858 240 aaKnown RBP17.72■□□□□ 0.43
ACTN4-204ENST00000440400 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
ACTN4-204ENST00000440400 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
ACTN4-204ENST00000440400 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.7■□□□□ 0.42
ACTN4-204ENST00000440400 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
ACTN4-204ENST00000440400 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
ACTN4-204ENST00000440400 STAG3Q9UJ98 1225 aa17.7■□□□□ 0.42
ACTN4-204ENST00000440400 NRKQ7Z2Y5 1582 aa17.69■□□□□ 0.42
ACTN4-204ENST00000440400 CCDC136Q96JN2 1154 aa17.69■□□□□ 0.42
ACTN4-204ENST00000440400 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
ACTN4-204ENST00000440400 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
ACTN4-204ENST00000440400 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
ACTN4-204ENST00000440400 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
ACTN4-204ENST00000440400 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
ACTN4-204ENST00000440400 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
ACTN4-204ENST00000440400 SLC12A5Q9H2X9 1139 aa17.66■□□□□ 0.42
ACTN4-204ENST00000440400 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
ACTN4-204ENST00000440400 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
ACTN4-204ENST00000440400 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
ACTN4-204ENST00000440400 CGNL1Q0VF96 1302 aa17.65■□□□□ 0.42
ACTN4-204ENST00000440400 COL3A1P02461 1466 aaPredicted RBP17.64■□□□□ 0.42
ACTN4-204ENST00000440400 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
ACTN4-204ENST00000440400 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
ACTN4-204ENST00000440400 PTPRUQ92729 1446 aa17.63■□□□□ 0.41
ACTN4-204ENST00000440400 IQSEC2Q5JU85 1478 aa17.62■□□□□ 0.41
ACTN4-204ENST00000440400 CABP2Q9NPB3 220 aa17.61■□□□□ 0.41
ACTN4-204ENST00000440400 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
ACTN4-204ENST00000440400 LTKP29376 864 aa17.61■□□□□ 0.41
ACTN4-204ENST00000440400 STK26Q9P289 416 aa17.61■□□□□ 0.41
ACTN4-204ENST00000440400 USP54Q70EL1 1684 aa17.6■□□□□ 0.41
ACTN4-204ENST00000440400 CHD2O14647 1828 aaKnown RBP17.6■□□□□ 0.41
ACTN4-204ENST00000440400 PIK3R4Q99570 1358 aa17.6■□□□□ 0.41
ACTN4-204ENST00000440400 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
ACTN4-204ENST00000440400 CDK19Q9BWU1 502 aa17.59■□□□□ 0.41
ACTN4-204ENST00000440400 NALCNQ8IZF0 1738 aa17.59■□□□□ 0.41
ACTN4-204ENST00000440400 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-204ENST00000440400 POGKQ9P215 609 aa17.59■□□□□ 0.41
ACTN4-204ENST00000440400 NEFLP07196 543 aa17.58■□□□□ 0.4
ACTN4-204ENST00000440400 MINK1Q8N4C8 1332 aaPredicted RBP17.57■□□□□ 0.4
ACTN4-204ENST00000440400 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
ACTN4-204ENST00000440400 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
ACTN4-204ENST00000440400 TBX22Q9Y458 520 aa17.57■□□□□ 0.4
ACTN4-204ENST00000440400 CEBPAP49715 358 aaPredicted RBP17.56■□□□□ 0.4
ACTN4-204ENST00000440400 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
ACTN4-204ENST00000440400 WASLO00401 505 aaPredicted RBP17.56■□□□□ 0.4
ACTN4-204ENST00000440400 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
ACTN4-204ENST00000440400 FMN2Q9NZ56 1722 aa17.56■□□□□ 0.4
ACTN4-204ENST00000440400 NGEFQ8N5V2 710 aa17.55■□□□□ 0.4
ACTN4-204ENST00000440400 TERF2IPQ9NYB0 399 aa17.55■□□□□ 0.4
ACTN4-204ENST00000440400 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
ACTN4-204ENST00000440400 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
ACTN4-204ENST00000440400 THEMISQ8N1K5 641 aaPredicted RBP17.54■□□□□ 0.4
ACTN4-204ENST00000440400 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
ACTN4-204ENST00000440400 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
ACTN4-204ENST00000440400 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
ACTN4-204ENST00000440400 LRRC7Q96NW7 1537 aa17.53■□□□□ 0.4
ACTN4-204ENST00000440400 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
ACTN4-204ENST00000440400 SETD1BQ9UPS6 1966 aaKnown RBP17.52■□□□□ 0.4
ACTN4-204ENST00000440400 MORC1Q86VD1 984 aa17.52■□□□□ 0.4
ACTN4-204ENST00000440400 TXNDC2Q86VQ3 553 aa17.51■□□□□ 0.39
ACTN4-204ENST00000440400 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
ACTN4-204ENST00000440400 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
ACTN4-204ENST00000440400 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
ACTN4-204ENST00000440400 NBR1Q14596 966 aa17.5■□□□□ 0.39
ACTN4-204ENST00000440400 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
ACTN4-204ENST00000440400 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
ACTN4-204ENST00000440400 SSH2Q76I76 1423 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms