RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 FAM135BQ49AJ0 1406 aa26.82■■□□□ 1.88
APTR-204ENST00000440088 CPS1P31327 1500 aa26.82■■□□□ 1.88
APTR-204ENST00000440088 DIP2AQ14689 1571 aa26.82■■□□□ 1.88
APTR-204ENST00000440088 WAPLQ7Z5K2 1190 aa26.81■■□□□ 1.88
APTR-204ENST00000440088 PARD3Q8TEW0 1356 aa26.79■■□□□ 1.88
APTR-204ENST00000440088 MRS2Q9HD23 443 aa26.79■■□□□ 1.88
APTR-204ENST00000440088 PLEKHH1Q9ULM0 1364 aa26.79■■□□□ 1.88
APTR-204ENST00000440088 ANKLE2Q86XL3 938 aa26.78■■□□□ 1.88
APTR-204ENST00000440088 TMC1Q8TDI8 760 aa26.78■■□□□ 1.88
APTR-204ENST00000440088 SRPK2P78362 688 aaKnown RBP26.78■■□□□ 1.88
APTR-204ENST00000440088 CCDC184Q52MB2 194 aa26.78■■□□□ 1.88
APTR-204ENST00000440088 CABP2Q9NPB3 220 aa26.78■■□□□ 1.88
APTR-204ENST00000440088 MYBBP1AQ9BQG0 1328 aaKnown RBP26.77■■□□□ 1.88
APTR-204ENST00000440088 CC2D1BQ5T0F9 858 aaKnown RBP26.77■■□□□ 1.88
APTR-204ENST00000440088 SLC12A5Q9H2X9 1139 aa26.75■■□□□ 1.87
APTR-204ENST00000440088 ATAD2Q6PL18 1390 aa26.75■■□□□ 1.87
APTR-204ENST00000440088 NINLQ9Y2I6 1382 aa26.75■■□□□ 1.87
APTR-204ENST00000440088 AMER1Q5JTC6 1135 aaPredicted RBP26.74■■□□□ 1.87
APTR-204ENST00000440088 NPC1L1Q9UHC9 1359 aa26.73■■□□□ 1.87
APTR-204ENST00000440088 CDK19Q9BWU1 502 aa26.73■■□□□ 1.87
APTR-204ENST00000440088 ROBO2Q9HCK4 1378 aa26.72■■□□□ 1.87
APTR-204ENST00000440088 PTPRUQ92729 1446 aa26.72■■□□□ 1.87
APTR-204ENST00000440088 CARD14Q9BXL6 1004 aa26.71■■□□□ 1.87
APTR-204ENST00000440088 AMOTL2Q9Y2J4 779 aa26.7■■□□□ 1.86
APTR-204ENST00000440088 BRD4O60885 1362 aaPredicted RBP26.69■■□□□ 1.86
APTR-204ENST00000440088 ANKRD36BQ8N2N9 1353 aa26.69■■□□□ 1.86
APTR-204ENST00000440088 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
APTR-204ENST00000440088 NLRP13Q86W25 1043 aa26.68■■□□□ 1.86
APTR-204ENST00000440088 PTCH1Q13635 1447 aa26.66■■□□□ 1.86
APTR-204ENST00000440088 WASLO00401 505 aaPredicted RBP26.66■■□□□ 1.86
APTR-204ENST00000440088 NSD3Q9BZ95 1437 aa26.66■■□□□ 1.86
APTR-204ENST00000440088 FAM9BQ8IZU0 186 aa26.64■■□□□ 1.86
APTR-204ENST00000440088 XRN1Q8IZH2 1706 aaKnown RBP26.63■■□□□ 1.85
APTR-204ENST00000440088 ADGRB2O60241 1585 aa26.62■■□□□ 1.85
APTR-204ENST00000440088 TERF2IPQ9NYB0 399 aa26.61■■□□□ 1.85
APTR-204ENST00000440088 USP32Q8NFA0 1604 aa26.61■■□□□ 1.85
APTR-204ENST00000440088 NPHP4O75161 1426 aaPredicted RBP26.61■■□□□ 1.85
APTR-204ENST00000440088 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.61■■□□□ 1.85
APTR-204ENST00000440088 A0A1W2PP64 1363 aa26.6■■□□□ 1.85
APTR-204ENST00000440088 CGNL1Q0VF96 1302 aa26.59■■□□□ 1.85
APTR-204ENST00000440088 CABP1Q9NZU7 370 aa26.58■■□□□ 1.85
APTR-204ENST00000440088 KDM4FA0A1W2PPD8 638 aa26.57■■□□□ 1.84
APTR-204ENST00000440088 CD163L1Q9NR16 1453 aa26.57■■□□□ 1.84
APTR-204ENST00000440088 PNISRQ8TF01 805 aaKnown RBP26.56■■□□□ 1.84
APTR-204ENST00000440088 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
APTR-204ENST00000440088 KCNA6P17658 529 aa26.56■■□□□ 1.84
APTR-204ENST00000440088 HDGFL2Q7Z4V5 671 aaPredicted RBP26.56■■□□□ 1.84
APTR-204ENST00000440088 PPP2R1AP30153 589 aa26.55■■□□□ 1.84
APTR-204ENST00000440088 ATP7BP35670 1465 aa26.54■■□□□ 1.84
APTR-204ENST00000440088 HNRNPUQ00839 825 aaKnown RBP eCLIP26.54■■□□□ 1.84
APTR-204ENST00000440088 NUDT16Q96DE0 195 aaKnown RBP26.54■■□□□ 1.84
APTR-204ENST00000440088 NCKAP5LQ9HCH0 1330 aa26.54■■□□□ 1.84
APTR-204ENST00000440088 NSD2O96028 1365 aa26.53■■□□□ 1.84
APTR-204ENST00000440088 CCDC61Q9Y6R9 512 aa26.53■■□□□ 1.84
APTR-204ENST00000440088 PPIP5K1Q6PFW1 1433 aa26.52■■□□□ 1.84
APTR-204ENST00000440088 MORC1Q86VD1 984 aa26.49■■□□□ 1.83
APTR-204ENST00000440088 PRR36Q9H6K5 1346 aa26.47■■□□□ 1.83
APTR-204ENST00000440088 CPSF1Q10570 1443 aaKnown RBP26.46■■□□□ 1.83
APTR-204ENST00000440088 CDC42BPGQ6DT37 1551 aa26.45■■□□□ 1.82
APTR-204ENST00000440088 TOPAZ1Q8N9V7 1692 aa26.43■■□□□ 1.82
APTR-204ENST00000440088 FYB1O15117 783 aa26.41■■□□□ 1.82
APTR-204ENST00000440088 EDC4Q6P2E9 1401 aaKnown RBP26.4■■□□□ 1.82
APTR-204ENST00000440088 ITSN1Q15811 1721 aa26.4■■□□□ 1.82
APTR-204ENST00000440088 ZNF692Q9BU19 519 aaPredicted RBP26.4■■□□□ 1.82
APTR-204ENST00000440088 NWD1Q149M9 1564 aa26.4■■□□□ 1.82
APTR-204ENST00000440088 NUTM2FA1L443 756 aa26.39■■□□□ 1.82
APTR-204ENST00000440088 HSPA2P54652 639 aa26.39■■□□□ 1.82
APTR-204ENST00000440088 ANKRD26Q9UPS8 1709 aa26.39■■□□□ 1.82
APTR-204ENST00000440088 AKAP12Q02952 1782 aa26.39■■□□□ 1.81
APTR-204ENST00000440088 KIF20BQ96Q89 1820 aa26.38■■□□□ 1.81
APTR-204ENST00000440088 PLEKHG3A1L390 1219 aa26.38■■□□□ 1.81
APTR-204ENST00000440088 GGNBP2Q9H3C7 697 aa26.38■■□□□ 1.81
APTR-204ENST00000440088 LMTK3Q96Q04 1460 aa26.38■■□□□ 1.81
APTR-204ENST00000440088 MON2Q7Z3U7 1717 aa26.38■■□□□ 1.81
APTR-204ENST00000440088 TNNT2P45379 298 aaPredicted RBP26.38■■□□□ 1.81
APTR-204ENST00000440088 ZBED9Q6R2W3 1325 aa26.37■■□□□ 1.81
APTR-204ENST00000440088 NALCNQ8IZF0 1738 aa26.36■■□□□ 1.81
APTR-204ENST00000440088 INSRP06213 1382 aa26.36■■□□□ 1.81
APTR-204ENST00000440088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.36■■□□□ 1.813e-8■■■□□ 17.7
APTR-204ENST00000440088 ANKARQ7Z5J8 1434 aa26.35■■□□□ 1.81
APTR-204ENST00000440088 FMN2Q9NZ56 1722 aa26.34■■□□□ 1.81
APTR-204ENST00000440088 POLR3AO14802 1390 aaPredicted RBP26.34■■□□□ 1.81
APTR-204ENST00000440088 ADGRL3Q9HAR2 1447 aa26.34■■□□□ 1.81
APTR-204ENST00000440088 ACEP12821 1306 aa26.33■■□□□ 1.81
APTR-204ENST00000440088 WDR43Q15061 677 aaKnown RBP eCLIP26.33■■□□□ 1.81
APTR-204ENST00000440088 NKTRP30414 1462 aaKnown RBP26.33■■□□□ 1.8
APTR-204ENST00000440088 RGPD8O14715 1765 aaPredicted RBP26.31■■□□□ 1.8
APTR-204ENST00000440088 RBM33Q96EV2 1170 aaKnown RBP26.3■■□□□ 1.8
APTR-204ENST00000440088 MTHFSP49914 203 aa26.29■■□□□ 1.8
APTR-204ENST00000440088 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
APTR-204ENST00000440088 BLMP54132 1417 aaPredicted RBP26.28■■□□□ 1.8
APTR-204ENST00000440088 USP6P35125 1406 aa26.27■■□□□ 1.8
APTR-204ENST00000440088 C14orf37Q86TY3 774 aa26.27■■□□□ 1.8
APTR-204ENST00000440088 PROSER2Q86WR7 435 aaPredicted RBP26.27■■□□□ 1.8
APTR-204ENST00000440088 NRKQ7Z2Y5 1582 aa26.26■■□□□ 1.8
APTR-204ENST00000440088 PMFBP1Q8TBY8 1022 aa26.26■■□□□ 1.79
APTR-204ENST00000440088 CFAP53Q96M91 514 aa26.26■■□□□ 1.79
APTR-204ENST00000440088 NME9Q86XW9 330 aa26.25■■□□□ 1.79
APTR-204ENST00000440088 NGDNQ8NEJ9 315 aaKnown RBP26.25■■□□□ 1.79
APTR-204ENST00000440088 STRCQ7RTU9 1775 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms