RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.54
RTN4-211ENST00000438462 RREB1Q92766 1687 aa18.39■□□□□ 0.53
RTN4-211ENST00000438462 NUP188Q5SRE5 1749 aa18.39■□□□□ 0.53
RTN4-211ENST00000438462 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
RTN4-211ENST00000438462 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
RTN4-211ENST00000438462 TMEM131LA2VDJ0 1609 aa18.37■□□□□ 0.53
RTN4-211ENST00000438462 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
RTN4-211ENST00000438462 KCNQ2O43526 872 aa18.35■□□□□ 0.53
RTN4-211ENST00000438462 PLCH1Q4KWH8 1693 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 LMTK2Q8IWU2 1503 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 CEP162Q5TB80 1403 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 A0A0G2JS52 829 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 CAPN15O75808 1086 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 MYT1Q01538 1121 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 USP32Q8NFA0 1604 aa18.34■□□□□ 0.53
RTN4-211ENST00000438462 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
RTN4-211ENST00000438462 HDGFP51858 240 aaKnown RBP18.33■□□□□ 0.52
RTN4-211ENST00000438462 SLC52A1Q9NWF4 448 aa18.32■□□□□ 0.52
RTN4-211ENST00000438462 MYOM1P52179 1685 aa18.31■□□□□ 0.52
RTN4-211ENST00000438462 VPS72Q15906 364 aa18.31■□□□□ 0.52
RTN4-211ENST00000438462 CAMKK2Q96RR4 588 aa18.31■□□□□ 0.52
RTN4-211ENST00000438462 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
RTN4-211ENST00000438462 CCDC9Q9Y3X0 531 aaKnown RBP18.31■□□□□ 0.52
RTN4-211ENST00000438462 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
RTN4-211ENST00000438462 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
RTN4-211ENST00000438462 KANK1Q14678 1352 aa18.3■□□□□ 0.52
RTN4-211ENST00000438462 PXDNQ92626 1479 aa18.28■□□□□ 0.52
RTN4-211ENST00000438462 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
RTN4-211ENST00000438462 PARD3Q8TEW0 1356 aa18.28■□□□□ 0.52
RTN4-211ENST00000438462 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
RTN4-211ENST00000438462 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.51
RTN4-211ENST00000438462 SHANK3Q9BYB0 1731 aa18.25■□□□□ 0.51
RTN4-211ENST00000438462 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
RTN4-211ENST00000438462 KIF15Q9NS87 1388 aa18.22■□□□□ 0.51
RTN4-211ENST00000438462 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
RTN4-211ENST00000438462 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
RTN4-211ENST00000438462 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
RTN4-211ENST00000438462 FAM98CQ17RN3 349 aaKnown RBP18.21■□□□□ 0.51
RTN4-211ENST00000438462 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
RTN4-211ENST00000438462 XPCQ01831 940 aaPredicted RBP18.19■□□□□ 0.5
RTN4-211ENST00000438462 NRAPQ86VF7 1730 aa18.19■□□□□ 0.5
RTN4-211ENST00000438462 TRIM37O94972 964 aa18.18■□□□□ 0.5
RTN4-211ENST00000438462 APBA3O96018 575 aa18.17■□□□□ 0.5
RTN4-211ENST00000438462 PCDH10Q9P2E7 1040 aa18.17■□□□□ 0.5
RTN4-211ENST00000438462 THSD7AQ9UPZ6 1657 aa18.17■□□□□ 0.5
RTN4-211ENST00000438462 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
RTN4-211ENST00000438462 HSPA6P17066 643 aa18.16■□□□□ 0.5
RTN4-211ENST00000438462 DLC1Q96QB1 1528 aa18.16■□□□□ 0.5
RTN4-211ENST00000438462 METP08581 1390 aa18.16■□□□□ 0.5
RTN4-211ENST00000438462 PRELPP51888 382 aa18.15■□□□□ 0.5
RTN4-211ENST00000438462 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
RTN4-211ENST00000438462 CROCC2H7BZ55 1655 aa18.13■□□□□ 0.49
RTN4-211ENST00000438462 FHDC1Q9C0D6 1143 aaPredicted RBP18.13■□□□□ 0.49
RTN4-211ENST00000438462 SYT17Q9BSW7 474 aa18.12■□□□□ 0.49
RTN4-211ENST00000438462 COL13A1Q5TAT6 717 aaPredicted RBP18.11■□□□□ 0.49
RTN4-211ENST00000438462 NEXMIFQ5QGS0 1516 aa18.09■□□□□ 0.49
RTN4-211ENST00000438462 FAM83GA6ND36 823 aa18.09■□□□□ 0.49
RTN4-211ENST00000438462 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
RTN4-211ENST00000438462 FOXO3O43524 673 aa18.08■□□□□ 0.48
RTN4-211ENST00000438462 PTGER2P43116 358 aa18.08■□□□□ 0.48
RTN4-211ENST00000438462 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.48
RTN4-211ENST00000438462 ESCO1Q5FWF5 840 aa18.07■□□□□ 0.48
RTN4-211ENST00000438462 ZBTB7AO95365 584 aa18.06■□□□□ 0.48
RTN4-211ENST00000438462 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
RTN4-211ENST00000438462 FAM196AQ6ZSG2 479 aa18.05■□□□□ 0.48
RTN4-211ENST00000438462 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
RTN4-211ENST00000438462 TNS4Q8IZW8 715 aa18.04■□□□□ 0.48
RTN4-211ENST00000438462 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
RTN4-211ENST00000438462 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
RTN4-211ENST00000438462 CDC42BPGQ6DT37 1551 aa18.03■□□□□ 0.48
RTN4-211ENST00000438462 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
RTN4-211ENST00000438462 CABLES1Q8TDN4 633 aa18.02■□□□□ 0.48
RTN4-211ENST00000438462 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
RTN4-211ENST00000438462 GPR162Q16538 588 aa18■□□□□ 0.47
RTN4-211ENST00000438462 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
RTN4-211ENST00000438462 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
RTN4-211ENST00000438462 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
RTN4-211ENST00000438462 RGPD3A6NKT7 1758 aaPredicted RBP17.99■□□□□ 0.47
RTN4-211ENST00000438462 RGPD4Q7Z3J3 1758 aa17.99■□□□□ 0.47
RTN4-211ENST00000438462 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
RTN4-211ENST00000438462 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
RTN4-211ENST00000438462 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
RTN4-211ENST00000438462 ABCC5O15440 1437 aa17.97■□□□□ 0.47
RTN4-211ENST00000438462 TNS3Q68CZ2 1445 aa17.97■□□□□ 0.47
RTN4-211ENST00000438462 ATP10DQ9P241 1426 aa17.97■□□□□ 0.47
RTN4-211ENST00000438462 COL14A1Q05707 1796 aaKnown RBP17.96■□□□□ 0.47
RTN4-211ENST00000438462 GOLGB1Q14789 3259 aaKnown RBP17.96■□□□□ 0.47
RTN4-211ENST00000438462 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
RTN4-211ENST00000438462 KIF1AQ12756 1690 aa17.96■□□□□ 0.47
RTN4-211ENST00000438462 E9PCH4 1651 aa17.93■□□□□ 0.46
RTN4-211ENST00000438462 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
RTN4-211ENST00000438462 RRBP1Q9P2E9 1410 aaKnown RBP17.91■□□□□ 0.46
RTN4-211ENST00000438462 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
RTN4-211ENST00000438462 GPBP1L1Q9HC44 474 aaPredicted RBP17.9■□□□□ 0.46
RTN4-211ENST00000438462 HFM1A2PYH4 1435 aa17.89■□□□□ 0.46
RTN4-211ENST00000438462 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.46
RTN4-211ENST00000438462 DNAJC5GQ8N7S2 189 aa17.89■□□□□ 0.45
RTN4-211ENST00000438462 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
RTN4-211ENST00000438462 NUTM2FA1L443 756 aa17.88■□□□□ 0.45
RTN4-211ENST00000438462 APLP1P51693 650 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms