RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 VGFO15240 615 aaPredicted RBP21.41■■□□□ 1.02
LINC01088-201ENST00000437737 HFM1A2PYH4 1435 aa21.4■■□□□ 1.02
LINC01088-201ENST00000437737 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
LINC01088-201ENST00000437737 BCL9LQ86UU0 1499 aa21.39■■□□□ 1.02
LINC01088-201ENST00000437737 ESCO1Q5FWF5 840 aa21.39■■□□□ 1.01
LINC01088-201ENST00000437737 PRAG1Q86YV5 1406 aa21.38■■□□□ 1.01
LINC01088-201ENST00000437737 CDC42BPGQ6DT37 1551 aa21.37■■□□□ 1.01
LINC01088-201ENST00000437737 GJD4Q96KN9 370 aaPredicted RBP21.37■■□□□ 1.01
LINC01088-201ENST00000437737 PXDNQ92626 1479 aa21.37■■□□□ 1.01
LINC01088-201ENST00000437737 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.36■■□□□ 1.01
LINC01088-201ENST00000437737 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
LINC01088-201ENST00000437737 EP400Q96L91 3159 aa21.36■■□□□ 1.01
LINC01088-201ENST00000437737 PPLO60437 1756 aa21.36■■□□□ 1.01
LINC01088-201ENST00000437737 FOXO3O43524 673 aa21.33■■□□□ 1.01
LINC01088-201ENST00000437737 RPGRIP1LQ68CZ1 1315 aa21.32■■□□□ 1
LINC01088-201ENST00000437737 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
LINC01088-201ENST00000437737 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
LINC01088-201ENST00000437737 GLI3P10071 1580 aa21.31■■□□□ 1
LINC01088-201ENST00000437737 BRWD3Q6RI45 1802 aa21.3■■□□□ 1
LINC01088-201ENST00000437737 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
LINC01088-201ENST00000437737 NUTM2FA1L443 756 aa21.29■■□□□ 1
LINC01088-201ENST00000437737 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
LINC01088-201ENST00000437737 UNC5CLQ8IV45 518 aa21.29■■□□□ 1
LINC01088-201ENST00000437737 NAIPQ13075 1403 aa21.29■■□□□ 1
LINC01088-201ENST00000437737 SF3B2Q13435 895 aaKnown RBP21.27■■□□□ 1
LINC01088-201ENST00000437737 SLIT2O94813 1529 aa21.27■■□□□ 1
LINC01088-201ENST00000437737 DEFB132Q7Z7B7 95 aa21.26■□□□□ 0.99
LINC01088-201ENST00000437737 USP32Q8NFA0 1604 aa21.26■□□□□ 0.99
LINC01088-201ENST00000437737 KIF1AQ12756 1690 aa21.24■□□□□ 0.99
LINC01088-201ENST00000437737 STK26Q9P289 416 aa21.24■□□□□ 0.99
LINC01088-201ENST00000437737 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
LINC01088-201ENST00000437737 FMN2Q9NZ56 1722 aa21.23■□□□□ 0.99
LINC01088-201ENST00000437737 SPATA31A3Q5VYP0 1347 aa21.23■□□□□ 0.99
LINC01088-201ENST00000437737 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
LINC01088-201ENST00000437737 LRP5O75197 1615 aa21.22■□□□□ 0.99
LINC01088-201ENST00000437737 CCDC144AA2RUR9 1427 aa21.21■□□□□ 0.99
LINC01088-201ENST00000437737 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
LINC01088-201ENST00000437737 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
LINC01088-201ENST00000437737 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
LINC01088-201ENST00000437737 PLCH1Q4KWH8 1693 aa21.21■□□□□ 0.99
LINC01088-201ENST00000437737 TECPR2O15040 1411 aa21.2■□□□□ 0.98
LINC01088-201ENST00000437737 RRBP1Q9P2E9 1410 aaKnown RBP21.2■□□□□ 0.98
LINC01088-201ENST00000437737 CCDC9Q9Y3X0 531 aaKnown RBP21.19■□□□□ 0.98
LINC01088-201ENST00000437737 ADGRF5Q8IZF2 1346 aa21.19■□□□□ 0.98
LINC01088-201ENST00000437737 NWD2Q9ULI1 1742 aa21.18■□□□□ 0.98
LINC01088-201ENST00000437737 PLEKHG5O94827 1062 aa21.18■□□□□ 0.98
LINC01088-201ENST00000437737 KRT28Q7Z3Y7 464 aa21.18■□□□□ 0.98
LINC01088-201ENST00000437737 PLEKHH1Q9ULM0 1364 aa21.18■□□□□ 0.98
LINC01088-201ENST00000437737 RGPD8O14715 1765 aaPredicted RBP21.17■□□□□ 0.98
LINC01088-201ENST00000437737 IFT172Q9UG01 1749 aa21.16■□□□□ 0.98
LINC01088-201ENST00000437737 VPS72Q15906 364 aa21.16■□□□□ 0.98
LINC01088-201ENST00000437737 TNS3Q68CZ2 1445 aa21.15■□□□□ 0.98
LINC01088-201ENST00000437737 KRT27Q7Z3Y8 459 aa21.15■□□□□ 0.98
LINC01088-201ENST00000437737 ABCC11Q96J66 1382 aa21.14■□□□□ 0.98
LINC01088-201ENST00000437737 A0A0G2JS52 829 aa21.14■□□□□ 0.97
LINC01088-201ENST00000437737 MYT1Q01538 1121 aa21.14■□□□□ 0.97
LINC01088-201ENST00000437737 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.97
LINC01088-201ENST00000437737 CABLES1Q8TDN4 633 aa21.14■□□□□ 0.97
LINC01088-201ENST00000437737 ABCA3Q99758 1704 aa21.14■□□□□ 0.97
LINC01088-201ENST00000437737 PSME1Q06323 249 aa21.13■□□□□ 0.97
LINC01088-201ENST00000437737 RGL3Q3MIN7 710 aa21.13■□□□□ 0.97
LINC01088-201ENST00000437737 PSDA5PKW4 1024 aaPredicted RBP21.12■□□□□ 0.97
LINC01088-201ENST00000437737 LMOD2Q6P5Q4 547 aa21.12■□□□□ 0.97
LINC01088-201ENST00000437737 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
LINC01088-201ENST00000437737 BAG6P46379 1132 aa21.11■□□□□ 0.97
LINC01088-201ENST00000437737 PHF8Q9UPP1 1060 aa21.11■□□□□ 0.97
LINC01088-201ENST00000437737 ONECUT3O60422 494 aaPredicted RBP21.1■□□□□ 0.97
LINC01088-201ENST00000437737 YTHDC2Q9H6S0 1430 aaKnown RBP21.1■□□□□ 0.97
LINC01088-201ENST00000437737 PIK3C2GO75747 1445 aa21.08■□□□□ 0.97
LINC01088-201ENST00000437737 ARHGEF10O15013 1369 aa21.08■□□□□ 0.96
LINC01088-201ENST00000437737 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
LINC01088-201ENST00000437737 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
LINC01088-201ENST00000437737 NRXN1Q9ULB1 1477 aa21.07■□□□□ 0.96
LINC01088-201ENST00000437737 RGPD1P0DJD0 1748 aa21.07■□□□□ 0.96
LINC01088-201ENST00000437737 HRCP23327 699 aa21.06■□□□□ 0.96
LINC01088-201ENST00000437737 NRAPQ86VF7 1730 aa21.06■□□□□ 0.96
LINC01088-201ENST00000437737 FAM83GA6ND36 823 aa21.04■□□□□ 0.96
LINC01088-201ENST00000437737 FAM98CQ17RN3 349 aaKnown RBP21.04■□□□□ 0.96
LINC01088-201ENST00000437737 SIRT1Q96EB6 747 aa21.02■□□□□ 0.96
LINC01088-201ENST00000437737 EN1Q05925 392 aaPredicted RBP21.01■□□□□ 0.95
LINC01088-201ENST00000437737 SAFB2Q14151 953 aaKnown RBP eCLIP21.01■□□□□ 0.95
LINC01088-201ENST00000437737 COL14A1Q05707 1796 aaKnown RBP21■□□□□ 0.95
LINC01088-201ENST00000437737 PMFBP1Q8TBY8 1022 aa21■□□□□ 0.95
LINC01088-201ENST00000437737 BTG4Q9NY30 223 aa21■□□□□ 0.95
LINC01088-201ENST00000437737 DHX57Q6P158 1386 aaKnown RBP20.99■□□□□ 0.95
LINC01088-201ENST00000437737 PRAM1Q96QH2 718 aa20.98■□□□□ 0.95
LINC01088-201ENST00000437737 TRPM3Q9HCF6 1732 aaPredicted RBP20.98■□□□□ 0.95
LINC01088-201ENST00000437737 R3HDM1Q15032 1099 aaKnown RBP20.97■□□□□ 0.95
LINC01088-201ENST00000437737 FAM182BQ5T319 152 aa20.97■□□□□ 0.95
LINC01088-201ENST00000437737 C14orf93Q9H972 538 aaKnown RBP20.97■□□□□ 0.95
LINC01088-201ENST00000437737 TNS1Q9HBL0 1735 aaKnown RBP20.97■□□□□ 0.95
LINC01088-201ENST00000437737 ANKARQ7Z5J8 1434 aa20.96■□□□□ 0.95
LINC01088-201ENST00000437737 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
LINC01088-201ENST00000437737 ADGRB2O60241 1585 aa20.95■□□□□ 0.94
LINC01088-201ENST00000437737 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.94
LINC01088-201ENST00000437737 MPHOSPH9Q99550 1183 aa20.95■□□□□ 0.94
LINC01088-201ENST00000437737 POGKQ9P215 609 aa20.95■□□□□ 0.94
LINC01088-201ENST00000437737 GPRASP1Q5JY77 1395 aa20.94■□□□□ 0.94
LINC01088-201ENST00000437737 THSD7AQ9UPZ6 1657 aa20.93■□□□□ 0.94
LINC01088-201ENST00000437737 SPATA31A5Q5VU36 1347 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms