RNA–Protein interactions for RNA: ENST00000434503.5

LMBR1-210, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-210ENST00000434503 ESCO1Q5FWF5 840 aa30.91■■■□□ 2.54
LMBR1-210ENST00000434503 USP21Q9UK80 565 aa30.91■■■□□ 2.54
LMBR1-210ENST00000434503 CCDC144AA2RUR9 1427 aa30.9■■■□□ 2.54
LMBR1-210ENST00000434503 COL22A1Q8NFW1 1626 aaPredicted RBP30.9■■■□□ 2.54
LMBR1-210ENST00000434503 RGL3Q3MIN7 710 aa30.89■■■□□ 2.54
LMBR1-210ENST00000434503 NPHP3Q7Z494 1330 aa30.89■■■□□ 2.54
LMBR1-210ENST00000434503 FNBP4Q8N3X1 1017 aaPredicted RBP30.88■■■□□ 2.53
LMBR1-210ENST00000434503 SPATA31E1Q6ZUB1 1445 aa30.87■■■□□ 2.53
LMBR1-210ENST00000434503 STK26Q9P289 416 aa30.86■■■□□ 2.53
LMBR1-210ENST00000434503 TRPC5Q9UL62 973 aaPredicted RBP30.86■■■□□ 2.53
LMBR1-210ENST00000434503 PXDNQ92626 1479 aa30.85■■■□□ 2.53
LMBR1-210ENST00000434503 TECPR2O15040 1411 aa30.85■■■□□ 2.53
LMBR1-210ENST00000434503 ANKRD30BQ9BXX2 1392 aa30.85■■■□□ 2.53
LMBR1-210ENST00000434503 WAPLQ7Z5K2 1190 aa30.85■■■□□ 2.53
LMBR1-210ENST00000434503 LRPPRCP42704 1394 aaKnown RBP30.84■■■□□ 2.53
LMBR1-210ENST00000434503 FOXO3O43524 673 aa30.84■■■□□ 2.53
LMBR1-210ENST00000434503 MPHOSPH9Q99550 1183 aa30.84■■■□□ 2.53
LMBR1-210ENST00000434503 IFT172Q9UG01 1749 aa30.84■■■□□ 2.53
LMBR1-210ENST00000434503 MYOM2P54296 1465 aa30.83■■■□□ 2.53
LMBR1-210ENST00000434503 ABCC11Q96J66 1382 aa30.81■■■□□ 2.52
LMBR1-210ENST00000434503 XPCQ01831 940 aaPredicted RBP30.81■■■□□ 2.52
LMBR1-210ENST00000434503 TMEM132EQ6IEE7 984 aa30.81■■■□□ 2.52
LMBR1-210ENST00000434503 NUTM2FA1L443 756 aa30.8■■■□□ 2.52
LMBR1-210ENST00000434503 ATRNO75882 1429 aa30.8■■■□□ 2.52
LMBR1-210ENST00000434503 ATAD2Q6PL18 1390 aa30.79■■■□□ 2.52
LMBR1-210ENST00000434503 KNDC1Q76NI1 1749 aa30.78■■■□□ 2.52
LMBR1-210ENST00000434503 PLEKHH1Q9ULM0 1364 aa30.78■■■□□ 2.52
LMBR1-210ENST00000434503 PIK3C2GO75747 1445 aa30.77■■■□□ 2.52
LMBR1-210ENST00000434503 MARF1Q9Y4F3 1742 aaKnown RBP30.76■■■□□ 2.52
LMBR1-210ENST00000434503 BCL9LQ86UU0 1499 aa30.75■■■□□ 2.51
LMBR1-210ENST00000434503 YTHDC2Q9H6S0 1430 aaKnown RBP30.73■■■□□ 2.51
LMBR1-210ENST00000434503 FMN2Q9NZ56 1722 aa30.72■■■□□ 2.51
LMBR1-210ENST00000434503 SIRT1Q96EB6 747 aa30.7■■■□□ 2.51
LMBR1-210ENST00000434503 SPATA31A3Q5VYP0 1347 aa30.68■■■□□ 2.5
LMBR1-210ENST00000434503 KIF1AQ12756 1690 aa30.68■■■□□ 2.5
LMBR1-210ENST00000434503 C14orf93Q9H972 538 aaKnown RBP30.67■■■□□ 2.5
LMBR1-210ENST00000434503 GJD4Q96KN9 370 aaPredicted RBP30.66■■■□□ 2.5
LMBR1-210ENST00000434503 KRT28Q7Z3Y7 464 aa30.64■■■□□ 2.5
LMBR1-210ENST00000434503 ACIN1Q9UKV3 1341 aaKnown RBP30.63■■■□□ 2.49
LMBR1-210ENST00000434503 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.62■■■□□ 2.49
LMBR1-210ENST00000434503 NRXN1Q9ULB1 1477 aa30.62■■■□□ 2.49
LMBR1-210ENST00000434503 CFAP70Q5T0N1 1121 aa30.61■■■□□ 2.49
LMBR1-210ENST00000434503 UNC5CLQ8IV45 518 aa30.61■■■□□ 2.49
LMBR1-210ENST00000434503 DHX57Q6P158 1386 aaKnown RBP30.61■■■□□ 2.49
LMBR1-210ENST00000434503 RGPD8O14715 1765 aaPredicted RBP30.61■■■□□ 2.49
LMBR1-210ENST00000434503 SLIT2O94813 1529 aa30.6■■■□□ 2.49
LMBR1-210ENST00000434503 CCDC125Q86Z20 511 aa30.59■■■□□ 2.49
LMBR1-210ENST00000434503 PHF8Q9UPP1 1060 aa30.59■■■□□ 2.49
LMBR1-210ENST00000434503 RAB3GAP2Q9H2M9 1393 aa30.57■■■□□ 2.48
LMBR1-210ENST00000434503 USP32Q8NFA0 1604 aa30.56■■■□□ 2.48
LMBR1-210ENST00000434503 PSME1Q06323 249 aa30.56■■■□□ 2.48
LMBR1-210ENST00000434503 RALGAPBQ86X10 1494 aa30.56■■■□□ 2.48
LMBR1-210ENST00000434503 GLI3P10071 1580 aa30.55■■■□□ 2.48
LMBR1-210ENST00000434503 TNS3Q68CZ2 1445 aa30.55■■■□□ 2.48
LMBR1-210ENST00000434503 PRAM1Q96QH2 718 aa30.54■■■□□ 2.48
LMBR1-210ENST00000434503 SAFB2Q14151 953 aaKnown RBP eCLIP30.53■■■□□ 2.48
LMBR1-210ENST00000434503 ZRANB1Q9UGI0 708 aa30.53■■■□□ 2.48
LMBR1-210ENST00000434503 EP400Q96L91 3159 aa30.52■■■□□ 2.48
LMBR1-210ENST00000434503 CABLES1Q8TDN4 633 aa30.52■■■□□ 2.48
LMBR1-210ENST00000434503 HAP1P54257 671 aaPredicted RBP30.51■■■□□ 2.47
LMBR1-210ENST00000434503 SBNO1A3KN83 1393 aa30.5■■■□□ 2.47
LMBR1-210ENST00000434503 DLC1Q96QB1 1528 aa30.48■■■□□ 2.47
LMBR1-210ENST00000434503 POGKQ9P215 609 aa30.48■■■□□ 2.47
LMBR1-210ENST00000434503 PLEKHG5O94827 1062 aa30.46■■■□□ 2.47
LMBR1-210ENST00000434503 LMOD2Q6P5Q4 547 aa30.46■■■□□ 2.47
LMBR1-210ENST00000434503 BRWD3Q6RI45 1802 aa30.45■■■□□ 2.47
LMBR1-210ENST00000434503 ARHGEF10O15013 1369 aa30.45■■■□□ 2.47
LMBR1-210ENST00000434503 VPS72Q15906 364 aa30.45■■■□□ 2.47
LMBR1-210ENST00000434503 ANKARQ7Z5J8 1434 aa30.45■■■□□ 2.46
LMBR1-210ENST00000434503 PMFBP1Q8TBY8 1022 aa30.44■■■□□ 2.46
LMBR1-210ENST00000434503 ABCA3Q99758 1704 aa30.44■■■□□ 2.46
LMBR1-210ENST00000434503 NWD2Q9ULI1 1742 aa30.44■■■□□ 2.46
LMBR1-210ENST00000434503 PLCH1Q4KWH8 1693 aa30.43■■■□□ 2.46
LMBR1-210ENST00000434503 BLMP54132 1417 aaPredicted RBP30.43■■■□□ 2.46
LMBR1-210ENST00000434503 ADGRB1O14514 1584 aa30.42■■■□□ 2.46
LMBR1-210ENST00000434503 SEPT12Q8IYM1 358 aa30.42■■■□□ 2.46
LMBR1-210ENST00000434503 SRCAPQ6ZRS2 3230 aa30.42■■■□□ 2.46
LMBR1-210ENST00000434503 ADGRB2O60241 1585 aa30.41■■■□□ 2.46
LMBR1-210ENST00000434503 ONECUT3O60422 494 aaPredicted RBP30.4■■■□□ 2.46
LMBR1-210ENST00000434503 TRAK1Q9UPV9 953 aa30.4■■■□□ 2.46
LMBR1-210ENST00000434503 CCDC9Q9Y3X0 531 aaKnown RBP30.39■■■□□ 2.46
LMBR1-210ENST00000434503 FAM83GA6ND36 823 aa30.38■■■□□ 2.45
LMBR1-210ENST00000434503 HIRIP3Q9BW71 556 aaPredicted RBP30.38■■■□□ 2.45
LMBR1-210ENST00000434503 KDM2AQ9Y2K7 1162 aa30.35■■■□□ 2.45
LMBR1-210ENST00000434503 MINK1Q8N4C8 1332 aaPredicted RBP30.35■■■□□ 2.45
LMBR1-210ENST00000434503 TRPM3Q9HCF6 1732 aaPredicted RBP30.35■■■□□ 2.45
LMBR1-210ENST00000434503 DCAF11Q8TEB1 546 aa30.34■■■□□ 2.45
LMBR1-210ENST00000434503 HRCP23327 699 aa30.33■■■□□ 2.45
LMBR1-210ENST00000434503 DEFB132Q7Z7B7 95 aa30.33■■■□□ 2.45
LMBR1-210ENST00000434503 EIF3AQ14152 1382 aaKnown RBP30.32■■■□□ 2.44
LMBR1-210ENST00000434503 GPRASP1Q5JY77 1395 aa30.32■■■□□ 2.44
LMBR1-210ENST00000434503 PRR36Q9H6K5 1346 aa30.32■■■□□ 2.44
LMBR1-210ENST00000434503 KRT27Q7Z3Y8 459 aa30.32■■■□□ 2.44
LMBR1-210ENST00000434503 ALS2Q96Q42 1657 aa30.31■■■□□ 2.44
LMBR1-210ENST00000434503 SF3B2Q13435 895 aaKnown RBP30.31■■■□□ 2.44
LMBR1-210ENST00000434503 WASLO00401 505 aaPredicted RBP30.3■■■□□ 2.44
LMBR1-210ENST00000434503 TULP4Q9NRJ4 1543 aa30.3■■■□□ 2.44
LMBR1-210ENST00000434503 NRAPQ86VF7 1730 aa30.28■■■□□ 2.44
LMBR1-210ENST00000434503 STAC3Q96MF2 364 aa30.28■■■□□ 2.44
LMBR1-210ENST00000434503 BTG4Q9NY30 223 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms