RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 ALKQ9UM73 1620 aa31.48■■■□□ 2.63
MBD3-202ENST00000434436 CABP2Q9NPB3 220 aa31.48■■■□□ 2.63
MBD3-202ENST00000434436 POLR3AO14802 1390 aaPredicted RBP31.48■■■□□ 2.63
MBD3-202ENST00000434436 MORC1Q86VD1 984 aa31.47■■■□□ 2.63
MBD3-202ENST00000434436 CCDC136Q96JN2 1154 aa31.47■■■□□ 2.63
MBD3-202ENST00000434436 YTHDC2Q9H6S0 1430 aaKnown RBP31.47■■■□□ 2.63
MBD3-202ENST00000434436 CCDC146Q8IYE0 955 aa31.47■■■□□ 2.63
MBD3-202ENST00000434436 STAG3Q9UJ98 1225 aa31.46■■■□□ 2.63
MBD3-202ENST00000434436 ANKRD36BQ8N2N9 1353 aa31.46■■■□□ 2.63
MBD3-202ENST00000434436 A2ML1A8K2U0 1454 aa31.45■■■□□ 2.63
MBD3-202ENST00000434436 CGNL1Q0VF96 1302 aa31.42■■■□□ 2.62
MBD3-202ENST00000434436 EXOC6Q8TAG9 804 aa31.41■■■□□ 2.62
MBD3-202ENST00000434436 SHPRHQ149N8 1683 aa31.41■■■□□ 2.62
MBD3-202ENST00000434436 DUSP27Q5VZP5 1158 aa31.41■■■□□ 2.62
MBD3-202ENST00000434436 PRAM1Q96QH2 718 aa31.4■■■□□ 2.62
MBD3-202ENST00000434436 APAF1O14727 1248 aa31.39■■■□□ 2.62
MBD3-202ENST00000434436 TNNT2P45379 298 aaPredicted RBP31.39■■■□□ 2.62
MBD3-202ENST00000434436 GOLGA2Q08379 1002 aa31.39■■■□□ 2.62
MBD3-202ENST00000434436 RIMS2Q9UQ26 1411 aa31.37■■■□□ 2.61
MBD3-202ENST00000434436 MINK1Q8N4C8 1332 aaPredicted RBP31.36■■■□□ 2.61
MBD3-202ENST00000434436 SRPK2P78362 688 aaKnown RBP31.36■■■□□ 2.61
MBD3-202ENST00000434436 POGKQ9P215 609 aa31.35■■■□□ 2.61
MBD3-202ENST00000434436 NINLQ9Y2I6 1382 aa31.35■■■□□ 2.61
MBD3-202ENST00000434436 SETD1AO15047 1707 aaKnown RBP31.35■■■□□ 2.61
MBD3-202ENST00000434436 NSD2O96028 1365 aa31.34■■■□□ 2.61
MBD3-202ENST00000434436 PLIN1O60240 522 aa31.34■■■□□ 2.61
MBD3-202ENST00000434436 SLFN5Q08AF3 891 aa31.34■■■□□ 2.61
MBD3-202ENST00000434436 A0A1W2PP64 1363 aa31.33■■■□□ 2.61
MBD3-202ENST00000434436 TRMT2AQ8IZ69 625 aaKnown RBP31.32■■■□□ 2.6
MBD3-202ENST00000434436 ZMYM3Q14202 1370 aa31.31■■■□□ 2.6
MBD3-202ENST00000434436 ATAD2Q6PL18 1390 aa31.31■■■□□ 2.6
MBD3-202ENST00000434436 MTHFSP49914 203 aa31.3■■■□□ 2.6
MBD3-202ENST00000434436 ABCC11Q96J66 1382 aa31.29■■■□□ 2.6
MBD3-202ENST00000434436 SPINK5Q9NQ38 1064 aaPredicted RBP31.28■■■□□ 2.6
MBD3-202ENST00000434436 CD163L1Q9NR16 1453 aa31.28■■■□□ 2.6
MBD3-202ENST00000434436 DLC1Q96QB1 1528 aa31.27■■■□□ 2.6
MBD3-202ENST00000434436 NGEFQ8N5V2 710 aa31.26■■■□□ 2.6
MBD3-202ENST00000434436 NRXN3Q9Y4C0 1643 aa31.26■■■□□ 2.59
MBD3-202ENST00000434436 ESF1Q9H501 851 aaKnown RBP31.25■■■□□ 2.59
MBD3-202ENST00000434436 CDK19Q9BWU1 502 aa31.24■■■□□ 2.59
MBD3-202ENST00000434436 DMRT2Q9Y5R5 561 aa31.23■■■□□ 2.59
MBD3-202ENST00000434436 CRBNQ96SW2 442 aa31.22■■■□□ 2.59
MBD3-202ENST00000434436 CFAP53Q96M91 514 aa31.2■■■□□ 2.59
MBD3-202ENST00000434436 TERF2IPQ9NYB0 399 aa31.2■■■□□ 2.59
MBD3-202ENST00000434436 ANKRD26Q9UPS8 1709 aa31.2■■■□□ 2.59
MBD3-202ENST00000434436 WAPLQ7Z5K2 1190 aa31.2■■■□□ 2.59
MBD3-202ENST00000434436 E9PSI1 815 aa31.19■■■□□ 2.58
MBD3-202ENST00000434436 C20orf194Q5TEA3 1177 aa31.19■■■□□ 2.58
MBD3-202ENST00000434436 RUNDC1Q96C34 613 aa31.19■■■□□ 2.58
MBD3-202ENST00000434436 IQSEC2Q5JU85 1478 aa31.19■■■□□ 2.58
MBD3-202ENST00000434436 NKTRP30414 1462 aaKnown RBP31.18■■■□□ 2.58
MBD3-202ENST00000434436 GGNBP2Q9H3C7 697 aa31.18■■■□□ 2.58
MBD3-202ENST00000434436 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.17■■■□□ 2.58
MBD3-202ENST00000434436 NLRP1Q9C000 1473 aa31.17■■■□□ 2.58
MBD3-202ENST00000434436 WWC1Q8IX03 1113 aa31.17■■■□□ 2.58
MBD3-202ENST00000434436 TNRQ92752 1358 aa31.16■■■□□ 2.58
MBD3-202ENST00000434436 FYB1O15117 783 aa31.16■■■□□ 2.58
MBD3-202ENST00000434436 FANCIQ9NVI1 1328 aa31.16■■■□□ 2.58
MBD3-202ENST00000434436 MED14O60244 1454 aa31.15■■■□□ 2.58
MBD3-202ENST00000434436 CABP1Q9NZU7 370 aa31.14■■■□□ 2.58
MBD3-202ENST00000434436 METP08581 1390 aa31.14■■■□□ 2.58
MBD3-202ENST00000434436 TCP11L2Q8N4U5 519 aa31.13■■■□□ 2.57
MBD3-202ENST00000434436 HDGFL2Q7Z4V5 671 aaPredicted RBP31.12■■■□□ 2.57
MBD3-202ENST00000434436 UBR1Q8IWV7 1749 aa31.1■■■□□ 2.57
MBD3-202ENST00000434436 RRP7AQ9Y3A4 280 aaKnown RBP31.1■■■□□ 2.57
MBD3-202ENST00000434436 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
MBD3-202ENST00000434436 KIF20BQ96Q89 1820 aa31.1■■■□□ 2.57
MBD3-202ENST00000434436 NEUROD2Q15784 382 aa31.08■■■□□ 2.57
MBD3-202ENST00000434436 COL3A1P02461 1466 aaPredicted RBP31.08■■■□□ 2.57
MBD3-202ENST00000434436 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.07■■■□□ 2.56
MBD3-202ENST00000434436 KNDC1Q76NI1 1749 aa31.07■■■□□ 2.56
MBD3-202ENST00000434436 U2AF1L5P0DN76 240 aaPredicted RBP31.06■■■□□ 2.56
MBD3-202ENST00000434436 U2AF1Q01081 240 aaKnown RBP eCLIP31.06■■■□□ 2.56
MBD3-202ENST00000434436 ATP7BP35670 1465 aa31.05■■■□□ 2.56
MBD3-202ENST00000434436 HDGFP51858 240 aaKnown RBP31.04■■■□□ 2.56
MBD3-202ENST00000434436 TMEM2Q9UHN6 1383 aa31.04■■■□□ 2.56
MBD3-202ENST00000434436 MSH5O43196 834 aa31.04■■■□□ 2.56
MBD3-202ENST00000434436 ADGRB2O60241 1585 aa31.03■■■□□ 2.56
MBD3-202ENST00000434436 TXNDC2Q86VQ3 553 aa31.03■■■□□ 2.56
MBD3-202ENST00000434436 BCAR3O75815 825 aa31.03■■■□□ 2.56
MBD3-202ENST00000434436 TECPR2O15040 1411 aa31.02■■■□□ 2.56
MBD3-202ENST00000434436 CCDC27Q2M243 656 aa31.02■■■□□ 2.56
MBD3-202ENST00000434436 WASLO00401 505 aaPredicted RBP31.01■■■□□ 2.55
MBD3-202ENST00000434436 WDR63Q8IWG1 891 aa31■■■□□ 2.55
MBD3-202ENST00000434436 FAM135BQ49AJ0 1406 aa31■■■□□ 2.55
MBD3-202ENST00000434436 NCBP3Q53F19 620 aaKnown RBP30.99■■■□□ 2.55
MBD3-202ENST00000434436 CPS1P31327 1500 aa30.99■■■□□ 2.55
MBD3-202ENST00000434436 SIRT1Q96EB6 747 aa30.98■■■□□ 2.55
MBD3-202ENST00000434436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.96■■■□□ 2.55
MBD3-202ENST00000434436 CPSF1Q10570 1443 aaKnown RBP30.95■■■□□ 2.55
MBD3-202ENST00000434436 PNPLA6Q8IY17 1366 aa30.95■■■□□ 2.55
MBD3-202ENST00000434436 PLEKHF1Q96S99 279 aa30.95■■■□□ 2.55
MBD3-202ENST00000434436 U2SURPO15042 1029 aaKnown RBP30.95■■■□□ 2.54
MBD3-202ENST00000434436 PPIP5K1Q6PFW1 1433 aa30.94■■■□□ 2.54
MBD3-202ENST00000434436 ADAMTS13Q76LX8 1427 aa30.94■■■□□ 2.54
MBD3-202ENST00000434436 TCERG1O14776 1098 aaKnown RBP30.94■■■□□ 2.54
MBD3-202ENST00000434436 CEBPAP49715 358 aaPredicted RBP30.93■■■□□ 2.54
MBD3-202ENST00000434436 KDM2BQ8NHM5 1336 aa30.92■■■□□ 2.54
MBD3-202ENST00000434436 LTKP29376 864 aa30.9■■■□□ 2.54
MBD3-202ENST00000434436 NUDT16Q96DE0 195 aaKnown RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms