RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 ABCC3O15438 1527 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 ARHGAP31Q2M1Z3 1444 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 EXOC5O00471 708 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 LTV1Q96GA3 475 aaPredicted RBP6.27□□□□□ -1.41
UBE4A-202ENST00000431736 GPR162Q16538 588 aa6.27□□□□□ -1.41
UBE4A-202ENST00000431736 FAM98CQ17RN3 349 aaKnown RBP6.26□□□□□ -1.41
UBE4A-202ENST00000431736 TCOF1Q13428 1488 aaKnown RBP6.26□□□□□ -1.41
UBE4A-202ENST00000431736 SEPT12Q8IYM1 358 aa6.26□□□□□ -1.41
UBE4A-202ENST00000431736 COG3Q96JB2 828 aa6.26□□□□□ -1.41
UBE4A-202ENST00000431736 BTG4Q9NY30 223 aa6.26□□□□□ -1.41
UBE4A-202ENST00000431736 EIF4G2P78344 907 aaKnown RBP eCLIP6.26□□□□□ -1.413e-10■■■■■ 43
UBE4A-202ENST00000431736 ZNF692Q9BU19 519 aaPredicted RBP6.26□□□□□ -1.41
UBE4A-202ENST00000431736 FRMPD1Q5SYB0 1578 aa6.26□□□□□ -1.41
UBE4A-202ENST00000431736 CNGB1Q14028 1251 aaPredicted RBP6.26□□□□□ -1.41
UBE4A-202ENST00000431736 DDB1Q16531 1140 aa6.26□□□□□ -1.41
UBE4A-202ENST00000431736 GJD4Q96KN9 370 aaPredicted RBP6.25□□□□□ -1.41
UBE4A-202ENST00000431736 CENPJQ9HC77 1338 aaPredicted RBP6.25□□□□□ -1.41
UBE4A-202ENST00000431736 MBD5Q9P267 1494 aa6.25□□□□□ -1.41
UBE4A-202ENST00000431736 WAPLQ7Z5K2 1190 aa6.25□□□□□ -1.41
UBE4A-202ENST00000431736 SPON1Q9HCB6 807 aa6.25□□□□□ -1.41
UBE4A-202ENST00000431736 MROH2AA6NES4 1674 aa6.25□□□□□ -1.41
UBE4A-202ENST00000431736 TMF1P82094 1093 aa6.25□□□□□ -1.41
UBE4A-202ENST00000431736 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
UBE4A-202ENST00000431736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.24□□□□□ -1.41
UBE4A-202ENST00000431736 ORAI2Q96SN7 254 aa6.24□□□□□ -1.41
UBE4A-202ENST00000431736 C3P01024 1663 aa6.24□□□□□ -1.41
UBE4A-202ENST00000431736 MYO3AQ8NEV4 1616 aa6.24□□□□□ -1.41
UBE4A-202ENST00000431736 CCDC61Q9Y6R9 512 aa6.24□□□□□ -1.41
UBE4A-202ENST00000431736 NOS1P29475 1434 aa6.24□□□□□ -1.41
UBE4A-202ENST00000431736 ROCK2O75116 1388 aaKnown RBP6.24□□□□□ -1.41
UBE4A-202ENST00000431736 CFAP70Q5T0N1 1121 aa6.24□□□□□ -1.41
UBE4A-202ENST00000431736 NUDT16Q96DE0 195 aaKnown RBP6.23□□□□□ -1.41
UBE4A-202ENST00000431736 ZC3H13Q5T200 1668 aaKnown RBP6.23□□□□□ -1.41
UBE4A-202ENST00000431736 CDC42BPAQ5VT25 1732 aa6.23□□□□□ -1.41
UBE4A-202ENST00000431736 POTEAQ6S8J7 498 aa6.23□□□□□ -1.41
UBE4A-202ENST00000431736 CDK19Q9BWU1 502 aa6.23□□□□□ -1.41
UBE4A-202ENST00000431736 TATP17735 454 aaPredicted RBP6.22□□□□□ -1.41
UBE4A-202ENST00000431736 CFAP65Q6ZU64 1925 aaKnown RBP6.22□□□□□ -1.41
UBE4A-202ENST00000431736 TCP11L2Q8N4U5 519 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 CFAP53Q96M91 514 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 CDC42BPBQ9Y5S2 1711 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 INO80Q9ULG1 1556 aaPredicted RBP6.22□□□□□ -1.41
UBE4A-202ENST00000431736 KIDINS220Q9ULH0 1771 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 WASLO00401 505 aaPredicted RBP6.22□□□□□ -1.41
UBE4A-202ENST00000431736 LRRC7Q96NW7 1537 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 EIF2AK4Q9P2K8 1649 aaKnown RBP6.22□□□□□ -1.41
UBE4A-202ENST00000431736 DDX17Q92841 729 aaKnown RBP6.22□□□□□ -1.41
UBE4A-202ENST00000431736 ADGRL3Q9HAR2 1447 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 ADGRB3O60242 1522 aa6.22□□□□□ -1.41
UBE4A-202ENST00000431736 RNF17Q9BXT8 1623 aaKnown RBP6.21□□□□□ -1.41
UBE4A-202ENST00000431736 IQGAP1P46940 1657 aa6.21□□□□□ -1.41
UBE4A-202ENST00000431736 CABLES1Q8TDN4 633 aa6.21□□□□□ -1.41
UBE4A-202ENST00000431736 C1orf141Q5JVX7 400 aa6.21□□□□□ -1.41
UBE4A-202ENST00000431736 UPF1Q92900 1129 aaKnown RBP eCLIP6.21□□□□□ -1.414e-6■■■□□ 17.1
UBE4A-202ENST00000431736 YY1P25490 414 aa6.21□□□□□ -1.42
UBE4A-202ENST00000431736 DDX54Q8TDD1 881 aaKnown RBP6.21□□□□□ -1.42
UBE4A-202ENST00000431736 MAST1Q9Y2H9 1570 aa6.21□□□□□ -1.42
UBE4A-202ENST00000431736 DCCP43146 1447 aa6.21□□□□□ -1.42
UBE4A-202ENST00000431736 PTCH1Q13635 1447 aa6.21□□□□□ -1.42
UBE4A-202ENST00000431736 DNMT1P26358 1616 aaKnown RBP6.21□□□□□ -1.42
UBE4A-202ENST00000431736 PSDA5PKW4 1024 aaPredicted RBP6.21□□□□□ -1.42
UBE4A-202ENST00000431736 CHRNA2Q15822 529 aa6.21□□□□□ -1.42
UBE4A-202ENST00000431736 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
UBE4A-202ENST00000431736 AK7Q96M32 723 aa6.2□□□□□ -1.42
UBE4A-202ENST00000431736 SYNMO15061 1565 aa6.2□□□□□ -1.42
UBE4A-202ENST00000431736 PRDM15P57071 1507 aaPredicted RBP6.2□□□□□ -1.42
UBE4A-202ENST00000431736 TFCP2L1Q9NZI6 479 aa6.2□□□□□ -1.42
UBE4A-202ENST00000431736 MED14O60244 1454 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 TRIM37O94972 964 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 TRIM26Q12899 539 aaPredicted RBP6.19□□□□□ -1.42
UBE4A-202ENST00000431736 VPS72Q15906 364 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 NUDCQ9Y266 331 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 KNSTRNQ9Y448 316 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 PLXNC1O60486 1568 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 NAIPQ13075 1403 aa6.19□□□□□ -1.42
UBE4A-202ENST00000431736 R3HDM1Q15032 1099 aaKnown RBP6.19□□□□□ -1.42
UBE4A-202ENST00000431736 ZNF330Q9Y3S2 320 aaPredicted RBP6.19□□□□□ -1.42
UBE4A-202ENST00000431736 MED1Q15648 1581 aaPredicted RBP6.19□□□□□ -1.42
UBE4A-202ENST00000431736 SIRT1Q96EB6 747 aa6.18□□□□□ -1.42
UBE4A-202ENST00000431736 C14orf93Q9H972 538 aaKnown RBP6.18□□□□□ -1.42
UBE4A-202ENST00000431736 SPG7Q9UQ90 795 aa6.18□□□□□ -1.42
UBE4A-202ENST00000431736 FLAD1Q8NFF5 587 aa6.18□□□□□ -1.42
UBE4A-202ENST00000431736 SMARCC1Q92922 1105 aaPredicted RBP6.18□□□□□ -1.42
UBE4A-202ENST00000431736 CABP2Q9NPB3 220 aa6.18□□□□□ -1.42
UBE4A-202ENST00000431736 ADGRL2O95490 1459 aa6.17□□□□□ -1.42
UBE4A-202ENST00000431736 EN1Q05925 392 aaPredicted RBP6.17□□□□□ -1.42
UBE4A-202ENST00000431736 THRAP3Q9Y2W1 955 aaKnown RBP6.17□□□□□ -1.42
UBE4A-202ENST00000431736 DIP2AQ14689 1571 aa6.17□□□□□ -1.42
UBE4A-202ENST00000431736 G3V3G9 751 aa6.17□□□□□ -1.42
UBE4A-202ENST00000431736 HSP90AB1P08238 724 aaKnown RBP6.17□□□□□ -1.42
UBE4A-202ENST00000431736 DCAF8Q5TAQ9 597 aa6.17□□□□□ -1.42
UBE4A-202ENST00000431736 ADGRF5Q8IZF2 1346 aa6.17□□□□□ -1.42
UBE4A-202ENST00000431736 SPATA31A3Q5VYP0 1347 aa6.16□□□□□ -1.42
UBE4A-202ENST00000431736 GRIN3BO60391 1043 aa6.16□□□□□ -1.42
UBE4A-202ENST00000431736 TTC5Q8N0Z6 440 aa6.16□□□□□ -1.42
UBE4A-202ENST00000431736 RTF1Q92541 710 aaKnown RBP6.16□□□□□ -1.42
UBE4A-202ENST00000431736 PNPLA6Q8IY17 1366 aa6.16□□□□□ -1.42
UBE4A-202ENST00000431736 PNNQ9H307 717 aaKnown RBP6.16□□□□□ -1.42
UBE4A-202ENST00000431736 CABP1Q9NZU7 370 aa6.15□□□□□ -1.42
UBE4A-202ENST00000431736 SLIT1O75093 1534 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms