RNA–Protein interactions for RNA: ENST00000430825.3

LMBR1-206, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-206ENST00000430825 HFM1A2PYH4 1435 aa25.63■■□□□ 1.69
LMBR1-206ENST00000430825 MYOM2P54296 1465 aa25.63■■□□□ 1.69
LMBR1-206ENST00000430825 BCL9LQ86UU0 1499 aa25.61■■□□□ 1.69
LMBR1-206ENST00000430825 KIF1BO60333 1816 aa25.61■■□□□ 1.69
LMBR1-206ENST00000430825 GJD4Q96KN9 370 aaPredicted RBP25.6■■□□□ 1.69
LMBR1-206ENST00000430825 EP400Q96L91 3159 aa25.6■■□□□ 1.69
LMBR1-206ENST00000430825 ESCO1Q5FWF5 840 aa25.59■■□□□ 1.69
LMBR1-206ENST00000430825 RPGRIP1LQ68CZ1 1315 aa25.59■■□□□ 1.69
LMBR1-206ENST00000430825 LRPPRCP42704 1394 aaKnown RBP25.56■■□□□ 1.68
LMBR1-206ENST00000430825 PXDNQ92626 1479 aa25.55■■□□□ 1.68
LMBR1-206ENST00000430825 CDC42BPGQ6DT37 1551 aa25.53■■□□□ 1.68
LMBR1-206ENST00000430825 MARF1Q9Y4F3 1742 aaKnown RBP25.53■■□□□ 1.68
LMBR1-206ENST00000430825 FOXO3O43524 673 aa25.52■■□□□ 1.68
LMBR1-206ENST00000430825 BLMP54132 1417 aaPredicted RBP25.52■■□□□ 1.68
LMBR1-206ENST00000430825 UNC5CLQ8IV45 518 aa25.51■■□□□ 1.67
LMBR1-206ENST00000430825 XPCQ01831 940 aaPredicted RBP25.49■■□□□ 1.67
LMBR1-206ENST00000430825 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.49■■□□□ 1.67
LMBR1-206ENST00000430825 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
LMBR1-206ENST00000430825 SLIT2O94813 1529 aa25.46■■□□□ 1.67
LMBR1-206ENST00000430825 NAIPQ13075 1403 aa25.46■■□□□ 1.67
LMBR1-206ENST00000430825 SF3B2Q13435 895 aaKnown RBP25.45■■□□□ 1.66
LMBR1-206ENST00000430825 PPLO60437 1756 aa25.43■■□□□ 1.66
LMBR1-206ENST00000430825 GLI3P10071 1580 aa25.43■■□□□ 1.66
LMBR1-206ENST00000430825 SPATA31A3Q5VYP0 1347 aa25.42■■□□□ 1.66
LMBR1-206ENST00000430825 TECPR2O15040 1411 aa25.4■■□□□ 1.66
LMBR1-206ENST00000430825 NUTM2FA1L443 756 aa25.4■■□□□ 1.66
LMBR1-206ENST00000430825 DEFB132Q7Z7B7 95 aa25.4■■□□□ 1.66
LMBR1-206ENST00000430825 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.66
LMBR1-206ENST00000430825 WAPLQ7Z5K2 1190 aa25.38■■□□□ 1.65
LMBR1-206ENST00000430825 SEPT12Q8IYM1 358 aa25.38■■□□□ 1.65
LMBR1-206ENST00000430825 SLC4A1APQ9BWU0 796 aaKnown RBP25.38■■□□□ 1.65
LMBR1-206ENST00000430825 STK26Q9P289 416 aa25.37■■□□□ 1.65
LMBR1-206ENST00000430825 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
LMBR1-206ENST00000430825 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
LMBR1-206ENST00000430825 VPS72Q15906 364 aa25.36■■□□□ 1.65
LMBR1-206ENST00000430825 USP32Q8NFA0 1604 aa25.36■■□□□ 1.65
LMBR1-206ENST00000430825 KRT28Q7Z3Y7 464 aa25.35■■□□□ 1.65
LMBR1-206ENST00000430825 KIF1AQ12756 1690 aa25.35■■□□□ 1.65
LMBR1-206ENST00000430825 ONECUT3O60422 494 aaPredicted RBP25.34■■□□□ 1.65
LMBR1-206ENST00000430825 BRWD3Q6RI45 1802 aa25.34■■□□□ 1.65
LMBR1-206ENST00000430825 RRBP1Q9P2E9 1410 aaKnown RBP25.34■■□□□ 1.65
LMBR1-206ENST00000430825 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
LMBR1-206ENST00000430825 LRP5O75197 1615 aa25.34■■□□□ 1.65
LMBR1-206ENST00000430825 PPARGC1BQ86YN6 1023 aaKnown RBP25.33■■□□□ 1.65
LMBR1-206ENST00000430825 PSME1Q06323 249 aa25.32■■□□□ 1.64
LMBR1-206ENST00000430825 KRT27Q7Z3Y8 459 aa25.31■■□□□ 1.64
LMBR1-206ENST00000430825 CCDC9Q9Y3X0 531 aaKnown RBP25.31■■□□□ 1.64
LMBR1-206ENST00000430825 ANKRD30BQ9BXX2 1392 aa25.31■■□□□ 1.64
LMBR1-206ENST00000430825 TNS3Q68CZ2 1445 aa25.3■■□□□ 1.64
LMBR1-206ENST00000430825 FMN2Q9NZ56 1722 aa25.3■■□□□ 1.64
LMBR1-206ENST00000430825 PLEKHH1Q9ULM0 1364 aa25.3■■□□□ 1.64
LMBR1-206ENST00000430825 KNDC1Q76NI1 1749 aa25.28■■□□□ 1.64
LMBR1-206ENST00000430825 NWD2Q9ULI1 1742 aa25.27■■□□□ 1.64
LMBR1-206ENST00000430825 BAG6P46379 1132 aa25.27■■□□□ 1.64
LMBR1-206ENST00000430825 TMEM132EQ6IEE7 984 aa25.27■■□□□ 1.64
LMBR1-206ENST00000430825 SIRT1Q96EB6 747 aa25.27■■□□□ 1.64
LMBR1-206ENST00000430825 PHF8Q9UPP1 1060 aa25.27■■□□□ 1.64
LMBR1-206ENST00000430825 RGL3Q3MIN7 710 aa25.25■■□□□ 1.63
LMBR1-206ENST00000430825 CABLES1Q8TDN4 633 aa25.25■■□□□ 1.63
LMBR1-206ENST00000430825 SBNO1A3KN83 1393 aa25.25■■□□□ 1.63
LMBR1-206ENST00000430825 YTHDC2Q9H6S0 1430 aaKnown RBP25.24■■□□□ 1.63
LMBR1-206ENST00000430825 ARHGEF10O15013 1369 aa25.24■■□□□ 1.63
LMBR1-206ENST00000430825 PLCH1Q4KWH8 1693 aa25.23■■□□□ 1.63
LMBR1-206ENST00000430825 PIK3C2GO75747 1445 aa25.22■■□□□ 1.63
LMBR1-206ENST00000430825 SPATA31E1Q6ZUB1 1445 aa25.22■■□□□ 1.63
LMBR1-206ENST00000430825 HRCP23327 699 aa25.22■■□□□ 1.63
LMBR1-206ENST00000430825 A0A0G2JS52 829 aa25.21■■□□□ 1.63
LMBR1-206ENST00000430825 PSDA5PKW4 1024 aaPredicted RBP25.21■■□□□ 1.63
LMBR1-206ENST00000430825 MYT1Q01538 1121 aa25.21■■□□□ 1.63
LMBR1-206ENST00000430825 LMOD2Q6P5Q4 547 aa25.21■■□□□ 1.63
LMBR1-206ENST00000430825 FAM83GA6ND36 823 aa25.19■■□□□ 1.62
LMBR1-206ENST00000430825 PLEKHG5O94827 1062 aa25.19■■□□□ 1.62
LMBR1-206ENST00000430825 NRXN1Q9ULB1 1477 aa25.19■■□□□ 1.62
LMBR1-206ENST00000430825 IFT172Q9UG01 1749 aa25.18■■□□□ 1.62
LMBR1-206ENST00000430825 FAM98CQ17RN3 349 aaKnown RBP25.16■■□□□ 1.62
LMBR1-206ENST00000430825 ABCA3Q99758 1704 aa25.15■■□□□ 1.62
LMBR1-206ENST00000430825 RGPD8O14715 1765 aaPredicted RBP25.14■■□□□ 1.62
LMBR1-206ENST00000430825 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
LMBR1-206ENST00000430825 DHX57Q6P158 1386 aaKnown RBP25.13■■□□□ 1.61
LMBR1-206ENST00000430825 EN1Q05925 392 aaPredicted RBP25.12■■□□□ 1.61
LMBR1-206ENST00000430825 BTG4Q9NY30 223 aa25.12■■□□□ 1.61
LMBR1-206ENST00000430825 ANKARQ7Z5J8 1434 aa25.11■■□□□ 1.61
LMBR1-206ENST00000430825 RGPD1P0DJD0 1748 aa25.09■■□□□ 1.61
LMBR1-206ENST00000430825 NRAPQ86VF7 1730 aa25.09■■□□□ 1.61
LMBR1-206ENST00000430825 PRAM1Q96QH2 718 aa25.09■■□□□ 1.61
LMBR1-206ENST00000430825 PMFBP1Q8TBY8 1022 aa25.08■■□□□ 1.61
LMBR1-206ENST00000430825 DISP2A7MBM2 1401 aa25.08■■□□□ 1.61
LMBR1-206ENST00000430825 SAFB2Q14151 953 aaKnown RBP eCLIP25.07■■□□□ 1.6
LMBR1-206ENST00000430825 R3HDM1Q15032 1099 aaKnown RBP25.07■■□□□ 1.6
LMBR1-206ENST00000430825 MPHOSPH9Q99550 1183 aa25.07■■□□□ 1.6
LMBR1-206ENST00000430825 SPATA31A5Q5VU36 1347 aa25.07■■□□□ 1.6
LMBR1-206ENST00000430825 SPATA31A7Q8IWB4 1347 aa25.07■■□□□ 1.6
LMBR1-206ENST00000430825 COL14A1Q05707 1796 aaKnown RBP25.06■■□□□ 1.6
LMBR1-206ENST00000430825 POGKQ9P215 609 aa25.06■■□□□ 1.6
LMBR1-206ENST00000430825 GPRASP1Q5JY77 1395 aa25.05■■□□□ 1.6
LMBR1-206ENST00000430825 CFAP70Q5T0N1 1121 aa25.05■■□□□ 1.6
LMBR1-206ENST00000430825 FAM182BQ5T319 152 aa25.03■■□□□ 1.6
LMBR1-206ENST00000430825 DLC1Q96QB1 1528 aa25.02■■□□□ 1.6
LMBR1-206ENST00000430825 EIF3AQ14152 1382 aaKnown RBP25.01■■□□□ 1.59
LMBR1-206ENST00000430825 TRPM3Q9HCF6 1732 aaPredicted RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms