RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 LRPPRCP42704 1394 aaKnown RBP25.38■■□□□ 1.65
CPSF4-203ENST00000430038 NRXN1Q9ULB1 1477 aa25.36■■□□□ 1.65
CPSF4-203ENST00000430038 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
CPSF4-203ENST00000430038 KNDC1Q76NI1 1749 aa25.36■■□□□ 1.65
CPSF4-203ENST00000430038 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
CPSF4-203ENST00000430038 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
CPSF4-203ENST00000430038 CDC42BPGQ6DT37 1551 aa25.35■■□□□ 1.65
CPSF4-203ENST00000430038 C14orf93Q9H972 538 aaKnown RBP25.34■■□□□ 1.65
CPSF4-203ENST00000430038 NUTM2FA1L443 756 aa25.33■■□□□ 1.65
CPSF4-203ENST00000430038 YTHDC2Q9H6S0 1430 aaKnown RBP25.33■■□□□ 1.65
CPSF4-203ENST00000430038 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
CPSF4-203ENST00000430038 ACIN1Q9UKV3 1341 aaKnown RBP25.31■■□□□ 1.64
CPSF4-203ENST00000430038 ESCO1Q5FWF5 840 aa25.3■■□□□ 1.64
CPSF4-203ENST00000430038 AFF2P51816 1311 aa25.3■■□□□ 1.64
CPSF4-203ENST00000430038 MYOM2P54296 1465 aa25.29■■□□□ 1.64
CPSF4-203ENST00000430038 RGPD8O14715 1765 aaPredicted RBP25.28■■□□□ 1.64
CPSF4-203ENST00000430038 FMN2Q9NZ56 1722 aa25.27■■□□□ 1.64
CPSF4-203ENST00000430038 XPCQ01831 940 aaPredicted RBP25.27■■□□□ 1.64
CPSF4-203ENST00000430038 FOXO3O43524 673 aa25.26■■□□□ 1.63
CPSF4-203ENST00000430038 C8orf37Q96NL8 207 aa25.26■■□□□ 1.63
CPSF4-203ENST00000430038 PXDNQ92626 1479 aa25.26■■□□□ 1.63
CPSF4-203ENST00000430038 ADAMTS2O95450 1211 aa25.25■■□□□ 1.63
CPSF4-203ENST00000430038 SIRT1Q96EB6 747 aa25.24■■□□□ 1.63
CPSF4-203ENST00000430038 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
CPSF4-203ENST00000430038 HRCP23327 699 aa25.21■■□□□ 1.63
CPSF4-203ENST00000430038 RXRBP28702 533 aa25.21■■□□□ 1.63
CPSF4-203ENST00000430038 DHX57Q6P158 1386 aaKnown RBP25.2■■□□□ 1.63
CPSF4-203ENST00000430038 ADGRB1O14514 1584 aa25.2■■□□□ 1.62
CPSF4-203ENST00000430038 SAFB2Q14151 953 aaKnown RBP eCLIP25.2■■□□□ 1.62
CPSF4-203ENST00000430038 KDM2AQ9Y2K7 1162 aa25.2■■□□□ 1.62
CPSF4-203ENST00000430038 NPHP3Q7Z494 1330 aa25.19■■□□□ 1.62
CPSF4-203ENST00000430038 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
CPSF4-203ENST00000430038 QTRT2Q9H974 415 aaKnown RBP25.18■■□□□ 1.62
CPSF4-203ENST00000430038 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
CPSF4-203ENST00000430038 NGLY1Q96IV0 654 aa25.17■■□□□ 1.62
CPSF4-203ENST00000430038 UPF1Q92900 1129 aaKnown RBP eCLIP25.14■■□□□ 1.62
CPSF4-203ENST00000430038 USP32Q8NFA0 1604 aa25.14■■□□□ 1.61
CPSF4-203ENST00000430038 DLC1Q96QB1 1528 aa25.13■■□□□ 1.61
CPSF4-203ENST00000430038 MARF1Q9Y4F3 1742 aaKnown RBP25.13■■□□□ 1.61
CPSF4-203ENST00000430038 TRAK1Q9UPV9 953 aa25.12■■□□□ 1.61
CPSF4-203ENST00000430038 CDK12Q9NYV4 1490 aaPredicted RBP25.12■■□□□ 1.61
CPSF4-203ENST00000430038 RGS12O14924 1447 aa25.12■■□□□ 1.61
CPSF4-203ENST00000430038 KIF1AQ12756 1690 aa25.11■■□□□ 1.61
CPSF4-203ENST00000430038 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
CPSF4-203ENST00000430038 RBM6P78332 1123 aaKnown RBP25.1■■□□□ 1.61
CPSF4-203ENST00000430038 KRT28Q7Z3Y7 464 aa25.1■■□□□ 1.61
CPSF4-203ENST00000430038 SPATA31A3Q5VYP0 1347 aa25.1■■□□□ 1.61
CPSF4-203ENST00000430038 USP21Q9UK80 565 aa25.09■■□□□ 1.61
CPSF4-203ENST00000430038 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
CPSF4-203ENST00000430038 POGKQ9P215 609 aa25.08■■□□□ 1.61
CPSF4-203ENST00000430038 PHF8Q9UPP1 1060 aa25.08■■□□□ 1.61
CPSF4-203ENST00000430038 BCL9LQ86UU0 1499 aa25.06■■□□□ 1.6
CPSF4-203ENST00000430038 ADGRB2O60241 1585 aa25.05■■□□□ 1.6
CPSF4-203ENST00000430038 MINK1Q8N4C8 1332 aaPredicted RBP25.05■■□□□ 1.6
CPSF4-203ENST00000430038 PMFBP1Q8TBY8 1022 aa25.04■■□□□ 1.6
CPSF4-203ENST00000430038 PRR36Q9H6K5 1346 aa25.04■■□□□ 1.6
CPSF4-203ENST00000430038 ATRNO75882 1429 aa25.03■■□□□ 1.6
CPSF4-203ENST00000430038 CABLES1Q8TDN4 633 aa25.02■■□□□ 1.6
CPSF4-203ENST00000430038 ARHGEF28Q8N1W1 1705 aaKnown RBP25.02■■□□□ 1.6
CPSF4-203ENST00000430038 TRPC5Q9UL62 973 aaPredicted RBP25.01■■□□□ 1.59
CPSF4-203ENST00000430038 ANKARQ7Z5J8 1434 aa24.99■■□□□ 1.59
CPSF4-203ENST00000430038 STAC3Q96MF2 364 aa24.99■■□□□ 1.59
CPSF4-203ENST00000430038 TNS3Q68CZ2 1445 aa24.98■■□□□ 1.59
CPSF4-203ENST00000430038 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
CPSF4-203ENST00000430038 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
CPSF4-203ENST00000430038 TRPM3Q9HCF6 1732 aaPredicted RBP24.98■■□□□ 1.59
CPSF4-203ENST00000430038 WASLO00401 505 aaPredicted RBP24.96■■□□□ 1.59
CPSF4-203ENST00000430038 PSME1Q06323 249 aa24.96■■□□□ 1.59
CPSF4-203ENST00000430038 SLIT2O94813 1529 aa24.96■■□□□ 1.59
CPSF4-203ENST00000430038 SBNO1A3KN83 1393 aa24.95■■□□□ 1.59
CPSF4-203ENST00000430038 NBPF1Q3BBV0 1214 aa24.95■■□□□ 1.58
CPSF4-203ENST00000430038 TULP4Q9NRJ4 1543 aa24.94■■□□□ 1.58
CPSF4-203ENST00000430038 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.94■■□□□ 1.58
CPSF4-203ENST00000430038 LMOD2Q6P5Q4 547 aa24.92■■□□□ 1.58
CPSF4-203ENST00000430038 GLI3P10071 1580 aa24.92■■□□□ 1.58
CPSF4-203ENST00000430038 ALS2Q96Q42 1657 aa24.91■■□□□ 1.58
CPSF4-203ENST00000430038 GJD4Q96KN9 370 aaPredicted RBP24.91■■□□□ 1.58
CPSF4-203ENST00000430038 KIAA1210Q9ULL0 1709 aa24.91■■□□□ 1.58
CPSF4-203ENST00000430038 EP400Q96L91 3159 aa24.9■■□□□ 1.58
CPSF4-203ENST00000430038 UNC5CLQ8IV45 518 aa24.9■■□□□ 1.58
CPSF4-203ENST00000430038 PLCH1Q4KWH8 1693 aa24.88■■□□□ 1.57
CPSF4-203ENST00000430038 FAM83GA6ND36 823 aa24.87■■□□□ 1.57
CPSF4-203ENST00000430038 SIN3AQ96ST3 1273 aa24.87■■□□□ 1.57
CPSF4-203ENST00000430038 ATP7BP35670 1465 aa24.87■■□□□ 1.57
CPSF4-203ENST00000430038 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
CPSF4-203ENST00000430038 BRWD3Q6RI45 1802 aa24.86■■□□□ 1.57
CPSF4-203ENST00000430038 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
CPSF4-203ENST00000430038 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
CPSF4-203ENST00000430038 ARHGEF10O15013 1369 aa24.85■■□□□ 1.57
CPSF4-203ENST00000430038 CDK19Q9BWU1 502 aa24.85■■□□□ 1.57
CPSF4-203ENST00000430038 HAP1P54257 671 aaPredicted RBP24.83■■□□□ 1.57
CPSF4-203ENST00000430038 L3MBTL2Q969R5 705 aa24.83■■□□□ 1.57
CPSF4-203ENST00000430038 NWD2Q9ULI1 1742 aa24.83■■□□□ 1.57
CPSF4-203ENST00000430038 NGDNQ8NEJ9 315 aaKnown RBP24.82■■□□□ 1.56
CPSF4-203ENST00000430038 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
CPSF4-203ENST00000430038 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
CPSF4-203ENST00000430038 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
CPSF4-203ENST00000430038 TOPAZ1Q8N9V7 1692 aa24.81■■□□□ 1.56
CPSF4-203ENST00000430038 ATAD2Q6PL18 1390 aa24.8■■□□□ 1.56
CPSF4-203ENST00000430038 NRAPQ86VF7 1730 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms