RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	ORAI2	Q96SN7	254 aa		26.39	■■□□□ 1.82
MRPL28-203	ENST00000429738	ROBO2	Q9HCK4	1378 aa		26.37	■■□□□ 1.81
MRPL28-203	ENST00000429738	RAB3GAP2	Q9H2M9	1393 aa		26.36	■■□□□ 1.81
MRPL28-203	ENST00000429738	LAMC1	P11047	1609 aa		26.36	■■□□□ 1.81
MRPL28-203	ENST00000429738	USP21	Q9UK80	565 aa		26.33	■■□□□ 1.81
MRPL28-203	ENST00000429738	ADGRF5	Q8IZF2	1346 aa		26.33	■■□□□ 1.81
MRPL28-203	ENST00000429738	ANKRD30B	Q9BXX2	1392 aa		26.33	■■□□□ 1.8
MRPL28-203	ENST00000429738	RGL3	Q3MIN7	710 aa		26.31	■■□□□ 1.8
MRPL28-203	ENST00000429738	FNBP4	Q8N3X1	1017 aa	Predicted RBP	26.31	■■□□□ 1.8
MRPL28-203	ENST00000429738	TRPC5	Q9UL62	973 aa	Predicted RBP	26.31	■■□□□ 1.8
MRPL28-203	ENST00000429738	ATAD2	Q6PL18	1390 aa		26.27	■■□□□ 1.8
MRPL28-203	ENST00000429738	PIK3C2G	O75747	1445 aa		26.27	■■□□□ 1.8
MRPL28-203	ENST00000429738	ESCO1	Q5FWF5	840 aa		26.24	■■□□□ 1.79
MRPL28-203	ENST00000429738	TECPR2	O15040	1411 aa		26.23	■■□□□ 1.79
MRPL28-203	ENST00000429738	NPHP3	Q7Z494	1330 aa		26.23	■■□□□ 1.79
MRPL28-203	ENST00000429738	HRC	P23327	699 aa		26.22	■■□□□ 1.79
MRPL28-203	ENST00000429738	NRXN1	Q9ULB1	1477 aa		26.22	■■□□□ 1.79
MRPL28-203	ENST00000429738	KNDC1	Q76NI1	1749 aa		26.22	■■□□□ 1.79
MRPL28-203	ENST00000429738	ATRN	O75882	1429 aa		26.22	■■□□□ 1.79
MRPL28-203	ENST00000429738	COL22A1	Q8NFW1	1626 aa	Predicted RBP	26.21	■■□□□ 1.79
MRPL28-203	ENST00000429738	MYOM2	P54296	1465 aa		26.2	■■□□□ 1.78
MRPL28-203	ENST00000429738	LRPPRC	P42704	1394 aa	Known RBP	26.2	■■□□□ 1.78
MRPL28-203	ENST00000429738	FOXO3	O43524	673 aa		26.19	■■□□□ 1.78
MRPL28-203	ENST00000429738	ABCC11	Q96J66	1382 aa		26.18	■■□□□ 1.78
MRPL28-203	ENST00000429738	SRCAP	Q6ZRS2	3230 aa		26.18	■■□□□ 1.78
MRPL28-203	ENST00000429738	CDC42BPG	Q6DT37	1551 aa		26.17	■■□□□ 1.78
MRPL28-203	ENST00000429738	XPC	Q01831	940 aa	Predicted RBP	26.15	■■□□□ 1.78
MRPL28-203	ENST00000429738	BCL9L	Q86UU0	1499 aa		26.15	■■□□□ 1.78
MRPL28-203	ENST00000429738	PXDN	Q92626	1479 aa		26.15	■■□□□ 1.78
MRPL28-203	ENST00000429738	TMEM132E	Q6IEE7	984 aa		26.14	■■□□□ 1.78
MRPL28-203	ENST00000429738	WAPL	Q7Z5K2	1190 aa		26.14	■■□□□ 1.78
MRPL28-203	ENST00000429738	C14orf93	Q9H972	538 aa	Known RBP	26.14	■■□□□ 1.78
MRPL28-203	ENST00000429738	STK26	Q9P289	416 aa		26.14	■■□□□ 1.78
MRPL28-203	ENST00000429738	YTHDC2	Q9H6S0	1430 aa	Known RBP	26.14	■■□□□ 1.77
MRPL28-203	ENST00000429738	CCDC125	Q86Z20	511 aa		26.13	■■□□□ 1.77
MRPL28-203	ENST00000429738	GJD4	Q96KN9	370 aa	Predicted RBP	26.12	■■□□□ 1.77
MRPL28-203	ENST00000429738	ZRANB1	Q9UGI0	708 aa		26.12	■■□□□ 1.77
MRPL28-203	ENST00000429738	NUTM2F	A1L443	756 aa		26.11	■■□□□ 1.77
MRPL28-203	ENST00000429738	PLEKHH1	Q9ULM0	1364 aa		26.09	■■□□□ 1.77
MRPL28-203	ENST00000429738	MARF1	Q9Y4F3	1742 aa	Known RBP	26.09	■■□□□ 1.77
MRPL28-203	ENST00000429738	SIRT1	Q96EB6	747 aa		26.08	■■□□□ 1.77
MRPL28-203	ENST00000429738	EP400	Q96L91	3159 aa		26.07	■■□□□ 1.76
MRPL28-203	ENST00000429738	CFAP70	Q5T0N1	1121 aa		26.07	■■□□□ 1.76
MRPL28-203	ENST00000429738	UNC5CL	Q8IV45	518 aa		26.05	■■□□□ 1.76
MRPL28-203	ENST00000429738	SPATA31A3	Q5VYP0	1347 aa		26.05	■■□□□ 1.76
MRPL28-203	ENST00000429738	DHX57	Q6P158	1386 aa	Known RBP	26.04	■■□□□ 1.76
MRPL28-203	ENST00000429738	FMN2	Q9NZ56	1722 aa		26.03	■■□□□ 1.76
MRPL28-203	ENST00000429738	ADGRB1	O14514	1584 aa		26.03	■■□□□ 1.76
MRPL28-203	ENST00000429738	KRT28	Q7Z3Y7	464 aa		26.02	■■□□□ 1.76
MRPL28-203	ENST00000429738	SLIT2	O94813	1529 aa		26	■■□□□ 1.75
MRPL28-203	ENST00000429738	DLC1	Q96QB1	1528 aa		26	■■□□□ 1.75
MRPL28-203	ENST00000429738	STAC3	Q96MF2	364 aa		25.99	■■□□□ 1.75
MRPL28-203	ENST00000429738	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	25.99	■■□□□ 1.75
MRPL28-203	ENST00000429738	RALGAPB	Q86X10	1494 aa		25.98	■■□□□ 1.75
MRPL28-203	ENST00000429738	PSME1	Q06323	249 aa		25.96	■■□□□ 1.75
MRPL28-203	ENST00000429738	DCAF11	Q8TEB1	546 aa		25.96	■■□□□ 1.75
MRPL28-203	ENST00000429738	KIF1A	Q12756	1690 aa		25.96	■■□□□ 1.75
MRPL28-203	ENST00000429738	PHF8	Q9UPP1	1060 aa		25.95	■■□□□ 1.74
MRPL28-203	ENST00000429738	GLI3	P10071	1580 aa		25.95	■■□□□ 1.74
MRPL28-203	ENST00000429738	RGPD8	O14715	1765 aa	Predicted RBP	25.93	■■□□□ 1.74
MRPL28-203	ENST00000429738	HAP1	P54257	671 aa	Predicted RBP	25.93	■■□□□ 1.74
MRPL28-203	ENST00000429738	PRAM1	Q96QH2	718 aa		25.93	■■□□□ 1.74
MRPL28-203	ENST00000429738	KDM2A	Q9Y2K7	1162 aa		25.93	■■□□□ 1.74
MRPL28-203	ENST00000429738	BLM	P54132	1417 aa	Predicted RBP	25.93	■■□□□ 1.74
MRPL28-203	ENST00000429738	VPS72	Q15906	364 aa		25.92	■■□□□ 1.74
MRPL28-203	ENST00000429738	SEPT12	Q8IYM1	358 aa		25.92	■■□□□ 1.74
MRPL28-203	ENST00000429738	ADGRB2	O60241	1585 aa		25.91	■■□□□ 1.74
MRPL28-203	ENST00000429738	CABLES1	Q8TDN4	633 aa		25.91	■■□□□ 1.74
MRPL28-203	ENST00000429738	USP32	Q8NFA0	1604 aa		25.91	■■□□□ 1.74
MRPL28-203	ENST00000429738	TNS3	Q68CZ2	1445 aa		25.89	■■□□□ 1.74
MRPL28-203	ENST00000429738	ONECUT3	O60422	494 aa	Predicted RBP	25.89	■■□□□ 1.74
MRPL28-203	ENST00000429738	SBNO1	A3KN83	1393 aa		25.88	■■□□□ 1.73
MRPL28-203	ENST00000429738	BRWD3	Q6RI45	1802 aa		25.88	■■□□□ 1.73
MRPL28-203	ENST00000429738	SF3B2	Q13435	895 aa	Known RBP	25.87	■■□□□ 1.73
MRPL28-203	ENST00000429738	DEFB132	Q7Z7B7	95 aa		25.87	■■□□□ 1.73
MRPL28-203	ENST00000429738	SAFB2	Q14151	953 aa	Known RBP eCLIP	25.86	■■□□□ 1.73
MRPL28-203	ENST00000429738	LMOD2	Q6P5Q4	547 aa		25.86	■■□□□ 1.73
MRPL28-203	ENST00000429738	TRAK1	Q9UPV9	953 aa		25.86	■■□□□ 1.73
MRPL28-203	ENST00000429738	PLEKHG5	O94827	1062 aa		25.85	■■□□□ 1.73
MRPL28-203	ENST00000429738	POGK	Q9P215	609 aa		25.85	■■□□□ 1.73
MRPL28-203	ENST00000429738	CCDC9	Q9Y3X0	531 aa	Known RBP	25.85	■■□□□ 1.73
MRPL28-203	ENST00000429738	ARHGEF10	O15013	1369 aa		25.84	■■□□□ 1.73
MRPL28-203	ENST00000429738	ANKAR	Q7Z5J8	1434 aa		25.83	■■□□□ 1.73
MRPL28-203	ENST00000429738	KRT27	Q7Z3Y8	459 aa		25.83	■■□□□ 1.73
MRPL28-203	ENST00000429738	ARHGEF28	Q8N1W1	1705 aa	Known RBP	25.83	■■□□□ 1.72
MRPL28-203	ENST00000429738	FAM83G	A6ND36	823 aa		25.82	■■□□□ 1.72
MRPL28-203	ENST00000429738	NWD2	Q9ULI1	1742 aa		25.82	■■□□□ 1.72
MRPL28-203	ENST00000429738	KIAA1210	Q9ULL0	1709 aa		25.82	■■□□□ 1.72
MRPL28-203	ENST00000429738	PMFBP1	Q8TBY8	1022 aa		25.8	■■□□□ 1.72
MRPL28-203	ENST00000429738	PLCH1	Q4KWH8	1693 aa		25.78	■■□□□ 1.72
MRPL28-203	ENST00000429738	HIRIP3	Q9BW71	556 aa	Predicted RBP	25.76	■■□□□ 1.71
MRPL28-203	ENST00000429738	TULP4	Q9NRJ4	1543 aa		25.76	■■□□□ 1.71
MRPL28-203	ENST00000429738	MINK1	Q8N4C8	1332 aa	Predicted RBP	25.75	■■□□□ 1.71
MRPL28-203	ENST00000429738	ABCA3	Q99758	1704 aa		25.74	■■□□□ 1.71
MRPL28-203	ENST00000429738	EIF3A	Q14152	1382 aa	Known RBP	25.74	■■□□□ 1.71
MRPL28-203	ENST00000429738	PRR36	Q9H6K5	1346 aa		25.73	■■□□□ 1.71
MRPL28-203	ENST00000429738	WASL	O00401	505 aa	Predicted RBP	25.73	■■□□□ 1.71
MRPL28-203	ENST00000429738	BTG4	Q9NY30	223 aa		25.73	■■□□□ 1.71
MRPL28-203	ENST00000429738		A0A0G2JS52	829 aa		25.72	■■□□□ 1.71
MRPL28-203	ENST00000429738	MYT1	Q01538	1121 aa		25.72	■■□□□ 1.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms