RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 ABCC11Q96J66 1382 aa27.63■■■□□ 2.01
LIN28AP1-201ENST00000429574 DHX57Q6P158 1386 aaKnown RBP27.62■■■□□ 2.01
LIN28AP1-201ENST00000429574 HRCP23327 699 aa27.62■■■□□ 2.01
LIN28AP1-201ENST00000429574 C14orf93Q9H972 538 aaKnown RBP27.62■■■□□ 2.01
LIN28AP1-201ENST00000429574 YTHDC2Q9H6S0 1430 aaKnown RBP27.6■■■□□ 2.01
LIN28AP1-201ENST00000429574 TECPR2O15040 1411 aa27.59■■■□□ 2.01
LIN28AP1-201ENST00000429574 NUTM2FA1L443 756 aa27.59■■■□□ 2.01
LIN28AP1-201ENST00000429574 CFAP70Q5T0N1 1121 aa27.59■■■□□ 2.01
LIN28AP1-201ENST00000429574 KNDC1Q76NI1 1749 aa27.58■■■□□ 2.01
LIN28AP1-201ENST00000429574 MYOM2P54296 1465 aa27.58■■■□□ 2.01
LIN28AP1-201ENST00000429574 CDC42BPGQ6DT37 1551 aa27.58■■■□□ 2.01
LIN28AP1-201ENST00000429574 KDM2AQ9Y2K7 1162 aa27.58■■■□□ 2.01
LIN28AP1-201ENST00000429574 LAMC1P11047 1609 aa27.58■■■□□ 2.01
LIN28AP1-201ENST00000429574 NPHP3Q7Z494 1330 aa27.57■■■□□ 2
LIN28AP1-201ENST00000429574 PNPLA6Q8IY17 1366 aa27.57■■■□□ 2
LIN28AP1-201ENST00000429574 SIRT1Q96EB6 747 aa27.56■■■□□ 2
LIN28AP1-201ENST00000429574 C8orf37Q96NL8 207 aa27.56■■■□□ 2
LIN28AP1-201ENST00000429574 DCAF11Q8TEB1 546 aa27.55■■■□□ 2
LIN28AP1-201ENST00000429574 SOS2Q07890 1332 aaPredicted RBP27.55■■■□□ 2
LIN28AP1-201ENST00000429574 AFF2P51816 1311 aa27.54■■■□□ 2
LIN28AP1-201ENST00000429574 POGKQ9P215 609 aa27.54■■■□□ 2
LIN28AP1-201ENST00000429574 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
LIN28AP1-201ENST00000429574 ADAMTS2O95450 1211 aa27.53■■■□□ 2
LIN28AP1-201ENST00000429574 RXRBP28702 533 aa27.53■■■□□ 2
LIN28AP1-201ENST00000429574 FOXO3O43524 673 aa27.52■■■□□ 2
LIN28AP1-201ENST00000429574 NGLY1Q96IV0 654 aa27.52■■■□□ 2
LIN28AP1-201ENST00000429574 NRXN1Q9ULB1 1477 aa27.51■■■□□ 2
LIN28AP1-201ENST00000429574 STAC3Q96MF2 364 aa27.51■■□□□ 1.99
LIN28AP1-201ENST00000429574 SAFB2Q14151 953 aaKnown RBP eCLIP27.5■■□□□ 1.99
LIN28AP1-201ENST00000429574 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
LIN28AP1-201ENST00000429574 XPCQ01831 940 aaPredicted RBP27.47■■□□□ 1.99
LIN28AP1-201ENST00000429574 FMN2Q9NZ56 1722 aa27.44■■□□□ 1.98
LIN28AP1-201ENST00000429574 QTRT2Q9H974 415 aaKnown RBP27.44■■□□□ 1.98
LIN28AP1-201ENST00000429574 TRAK1Q9UPV9 953 aa27.44■■□□□ 1.98
LIN28AP1-201ENST00000429574 KIF1AQ12756 1690 aa27.4■■□□□ 1.98
LIN28AP1-201ENST00000429574 PSME1Q06323 249 aa27.4■■□□□ 1.98
LIN28AP1-201ENST00000429574 PHF8Q9UPP1 1060 aa27.4■■□□□ 1.98
LIN28AP1-201ENST00000429574 KRT28Q7Z3Y7 464 aa27.39■■□□□ 1.98
LIN28AP1-201ENST00000429574 USP21Q9UK80 565 aa27.39■■□□□ 1.98
LIN28AP1-201ENST00000429574 DLC1Q96QB1 1528 aa27.38■■□□□ 1.97
LIN28AP1-201ENST00000429574 RBM6P78332 1123 aaKnown RBP27.38■■□□□ 1.97
LIN28AP1-201ENST00000429574 PXDNQ92626 1479 aa27.38■■□□□ 1.97
LIN28AP1-201ENST00000429574 HAP1P54257 671 aaPredicted RBP27.37■■□□□ 1.97
LIN28AP1-201ENST00000429574 RGPD8O14715 1765 aaPredicted RBP27.36■■□□□ 1.97
LIN28AP1-201ENST00000429574 COL22A1Q8NFW1 1626 aaPredicted RBP27.36■■□□□ 1.97
LIN28AP1-201ENST00000429574 LMOD2Q6P5Q4 547 aa27.34■■□□□ 1.97
LIN28AP1-201ENST00000429574 HIRIP3Q9BW71 556 aaPredicted RBP27.34■■□□□ 1.97
LIN28AP1-201ENST00000429574 MINK1Q8N4C8 1332 aaPredicted RBP27.34■■□□□ 1.97
LIN28AP1-201ENST00000429574 TRPC5Q9UL62 973 aaPredicted RBP27.33■■□□□ 1.97
LIN28AP1-201ENST00000429574 EIF3AQ14152 1382 aaKnown RBP27.33■■□□□ 1.97
LIN28AP1-201ENST00000429574 CDK12Q9NYV4 1490 aaPredicted RBP27.32■■□□□ 1.96
LIN28AP1-201ENST00000429574 ADGRB1O14514 1584 aa27.32■■□□□ 1.96
LIN28AP1-201ENST00000429574 SPATA31A3Q5VYP0 1347 aa27.32■■□□□ 1.96
LIN28AP1-201ENST00000429574 PMFBP1Q8TBY8 1022 aa27.3■■□□□ 1.96
LIN28AP1-201ENST00000429574 PLEKHG5O94827 1062 aa27.29■■□□□ 1.96
LIN28AP1-201ENST00000429574 FNBP4Q8N3X1 1017 aaPredicted RBP27.29■■□□□ 1.96
LIN28AP1-201ENST00000429574 ANKARQ7Z5J8 1434 aa27.28■■□□□ 1.96
LIN28AP1-201ENST00000429574 MARF1Q9Y4F3 1742 aaKnown RBP27.26■■□□□ 1.95
LIN28AP1-201ENST00000429574 WASLO00401 505 aaPredicted RBP27.25■■□□□ 1.95
LIN28AP1-201ENST00000429574 ADGRB2O60241 1585 aa27.25■■□□□ 1.95
LIN28AP1-201ENST00000429574 GPRASP1Q5JY77 1395 aa27.24■■□□□ 1.95
LIN28AP1-201ENST00000429574 UPF1Q92900 1129 aaKnown RBP eCLIP27.24■■□□□ 1.95
LIN28AP1-201ENST00000429574 TNS3Q68CZ2 1445 aa27.24■■□□□ 1.95
LIN28AP1-201ENST00000429574 SBNO1A3KN83 1393 aa27.22■■□□□ 1.95
LIN28AP1-201ENST00000429574 ARHGEF10O15013 1369 aa27.22■■□□□ 1.95
LIN28AP1-201ENST00000429574 NGDNQ8NEJ9 315 aaKnown RBP27.22■■□□□ 1.95
LIN28AP1-201ENST00000429574 RGS12O14924 1447 aa27.2■■□□□ 1.94
LIN28AP1-201ENST00000429574 TULP4Q9NRJ4 1543 aa27.18■■□□□ 1.94
LIN28AP1-201ENST00000429574 CABLES1Q8TDN4 633 aa27.18■■□□□ 1.94
LIN28AP1-201ENST00000429574 USP32Q8NFA0 1604 aa27.18■■□□□ 1.94
LIN28AP1-201ENST00000429574 ARHGEF28Q8N1W1 1705 aaKnown RBP27.18■■□□□ 1.94
LIN28AP1-201ENST00000429574 KIAA1210Q9ULL0 1709 aa27.17■■□□□ 1.94
LIN28AP1-201ENST00000429574 PAK3O75914 559 aaPredicted RBP27.17■■□□□ 1.94
LIN28AP1-201ENST00000429574 ATRNO75882 1429 aa27.16■■□□□ 1.94
LIN28AP1-201ENST00000429574 UNC5CLQ8IV45 518 aa27.16■■□□□ 1.94
LIN28AP1-201ENST00000429574 NUDT16Q96DE0 195 aaKnown RBP27.14■■□□□ 1.94
LIN28AP1-201ENST00000429574 GJD4Q96KN9 370 aaPredicted RBP27.14■■□□□ 1.94
LIN28AP1-201ENST00000429574 PRR36Q9H6K5 1346 aa27.14■■□□□ 1.93
LIN28AP1-201ENST00000429574 BCL9LQ86UU0 1499 aa27.13■■□□□ 1.93
LIN28AP1-201ENST00000429574 NEUROD1Q13562 356 aa27.13■■□□□ 1.93
LIN28AP1-201ENST00000429574 CDK19Q9BWU1 502 aa27.13■■□□□ 1.93
LIN28AP1-201ENST00000429574 ATAD2Q6PL18 1390 aa27.12■■□□□ 1.93
LIN28AP1-201ENST00000429574 CCDC9Q9Y3X0 531 aaKnown RBP27.12■■□□□ 1.93
LIN28AP1-201ENST00000429574 ITSN1Q15811 1721 aa27.12■■□□□ 1.93
LIN28AP1-201ENST00000429574 NBPF1Q3BBV0 1214 aa27.11■■□□□ 1.93
LIN28AP1-201ENST00000429574 L3MBTL2Q969R5 705 aa27.08■■□□□ 1.93
LIN28AP1-201ENST00000429574 SIN3AQ96ST3 1273 aa27.08■■□□□ 1.93
LIN28AP1-201ENST00000429574 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.07■■□□□ 1.92
LIN28AP1-201ENST00000429574 SLIT2O94813 1529 aa27.06■■□□□ 1.92
LIN28AP1-201ENST00000429574 SRPK2P78362 688 aaKnown RBP27.06■■□□□ 1.92
LIN28AP1-201ENST00000429574 CCDC61Q9Y6R9 512 aa27.06■■□□□ 1.92
LIN28AP1-201ENST00000429574 CENPJQ9HC77 1338 aaPredicted RBP27.05■■□□□ 1.92
LIN28AP1-201ENST00000429574 TRPM3Q9HCF6 1732 aaPredicted RBP27.04■■□□□ 1.92
LIN28AP1-201ENST00000429574 ABCA3Q99758 1704 aa27.02■■□□□ 1.92
LIN28AP1-201ENST00000429574 ATP7BP35670 1465 aa27.02■■□□□ 1.92
LIN28AP1-201ENST00000429574 FAM83GA6ND36 823 aa27.02■■□□□ 1.92
LIN28AP1-201ENST00000429574 VPS72Q15906 364 aa27.01■■□□□ 1.91
LIN28AP1-201ENST00000429574 NWD2Q9ULI1 1742 aa27.01■■□□□ 1.91
LIN28AP1-201ENST00000429574 PLCH1Q4KWH8 1693 aa27.01■■□□□ 1.91
LIN28AP1-201ENST00000429574 RALGAPBQ86X10 1494 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms