RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GLI2P10070 1586 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 SLFN5Q08AF3 891 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 IDI1Q13907 227 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 GZF1Q9H116 711 aaPredicted RBP10.3□□□□□ -0.76
HPS4-205ENST00000429411 EID1Q9Y6B2 187 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 ADGRF5Q8IZF2 1346 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 BECN1Q14457 450 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 MTHFSP49914 203 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 TCP11L2Q8N4U5 519 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 POGKQ9P215 609 aa10.3□□□□□ -0.76
HPS4-205ENST00000429411 HSP90AA1P07900 732 aaKnown RBP10.29□□□□□ -0.76
HPS4-205ENST00000429411 MAPK8IP3Q9UPT6 1336 aa10.29□□□□□ -0.76
HPS4-205ENST00000429411 GSE1Q14687 1217 aa10.29□□□□□ -0.76
HPS4-205ENST00000429411 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
HPS4-205ENST00000429411 ARAP3Q8WWN8 1544 aa10.29□□□□□ -0.76
HPS4-205ENST00000429411 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
HPS4-205ENST00000429411 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
HPS4-205ENST00000429411 MFAP1P55081 439 aaKnown RBP10.28□□□□□ -0.76
HPS4-205ENST00000429411 SMC4Q9NTJ3 1288 aa10.28□□□□□ -0.76
HPS4-205ENST00000429411 TNNQ9UQP3 1299 aa10.28□□□□□ -0.76
HPS4-205ENST00000429411 MAP3K4Q9Y6R4 1608 aa10.28□□□□□ -0.76
HPS4-205ENST00000429411 ELL2O00472 640 aaPredicted RBP10.27□□□□□ -0.76
HPS4-205ENST00000429411 IGHDP01880 384 aa10.27□□□□□ -0.76
HPS4-205ENST00000429411 ANKLE2Q86XL3 938 aa10.27□□□□□ -0.76
HPS4-205ENST00000429411 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.76
HPS4-205ENST00000429411 TSR2Q969E8 191 aaKnown RBP10.27□□□□□ -0.76
HPS4-205ENST00000429411 GGNBP2Q9H3C7 697 aa10.27□□□□□ -0.76
HPS4-205ENST00000429411 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.77
HPS4-205ENST00000429411 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.77
HPS4-205ENST00000429411 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
HPS4-205ENST00000429411 PTPRMP28827 1452 aa10.26□□□□□ -0.77
HPS4-205ENST00000429411 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
HPS4-205ENST00000429411 SOX12O15370 315 aa10.26□□□□□ -0.77
HPS4-205ENST00000429411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
HPS4-205ENST00000429411 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
HPS4-205ENST00000429411 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
HPS4-205ENST00000429411 IGSF3O75054 1194 aa10.25□□□□□ -0.77
HPS4-205ENST00000429411 PPP6R1Q9UPN7 881 aa10.25□□□□□ -0.77
HPS4-205ENST00000429411 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
HPS4-205ENST00000429411 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
HPS4-205ENST00000429411 CGNL1Q0VF96 1302 aa10.25□□□□□ -0.77
HPS4-205ENST00000429411 ATP7AQ04656 1500 aa10.25□□□□□ -0.77
HPS4-205ENST00000429411 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
HPS4-205ENST00000429411 PLA2R1Q13018 1463 aa10.24□□□□□ -0.77
HPS4-205ENST00000429411 RUNDC1Q96C34 613 aa10.24□□□□□ -0.77
HPS4-205ENST00000429411 ABCC1P33527 1531 aa10.24□□□□□ -0.77
HPS4-205ENST00000429411 ZNF335Q9H4Z2 1342 aaPredicted RBP10.23□□□□□ -0.77
HPS4-205ENST00000429411 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
HPS4-205ENST00000429411 TNRQ92752 1358 aa10.23□□□□□ -0.77
HPS4-205ENST00000429411 UBAP1LF5GYI3 381 aa10.23□□□□□ -0.77
HPS4-205ENST00000429411 APBB1O00213 710 aa10.23□□□□□ -0.77
HPS4-205ENST00000429411 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
HPS4-205ENST00000429411 C8orf34Q49A92 452 aa10.23□□□□□ -0.77
HPS4-205ENST00000429411 PPRC1Q5VV67 1664 aaKnown RBP10.22□□□□□ -0.77
HPS4-205ENST00000429411 SEC24BO95487 1268 aa10.22□□□□□ -0.77
HPS4-205ENST00000429411 MYH16Q9H6N6 1097 aa10.22□□□□□ -0.77
HPS4-205ENST00000429411 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
HPS4-205ENST00000429411 CDC42BPBQ9Y5S2 1711 aa10.22□□□□□ -0.77
HPS4-205ENST00000429411 MAGI2Q86UL8 1455 aa10.22□□□□□ -0.77
HPS4-205ENST00000429411 LMOD2Q6P5Q4 547 aa10.21□□□□□ -0.77
HPS4-205ENST00000429411 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
HPS4-205ENST00000429411 PREX2Q70Z35 1606 aa10.21□□□□□ -0.77
HPS4-205ENST00000429411 NSD3Q9BZ95 1437 aa10.21□□□□□ -0.77
HPS4-205ENST00000429411 MLH3Q9UHC1 1453 aa10.21□□□□□ -0.77
HPS4-205ENST00000429411 NAP1L5Q96NT1 182 aaPredicted RBP10.21□□□□□ -0.78
HPS4-205ENST00000429411 FBLN1P23142 703 aa10.2□□□□□ -0.78
HPS4-205ENST00000429411 EXOSC9Q06265 439 aaKnown RBP10.2□□□□□ -0.78
HPS4-205ENST00000429411 LTKP29376 864 aa10.2□□□□□ -0.78
HPS4-205ENST00000429411 PROSER2Q86WR7 435 aaPredicted RBP10.2□□□□□ -0.78
HPS4-205ENST00000429411 ZKSCAN2Q63HK3 967 aa10.2□□□□□ -0.78
HPS4-205ENST00000429411 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
HPS4-205ENST00000429411 SCAF11Q99590 1463 aaKnown RBP10.19□□□□□ -0.78
HPS4-205ENST00000429411 RLBP1P12271 317 aa10.19□□□□□ -0.78
HPS4-205ENST00000429411 KDM5DQ9BY66 1539 aa10.19□□□□□ -0.78
HPS4-205ENST00000429411 HMOX1P09601 288 aa10.19□□□□□ -0.78
HPS4-205ENST00000429411 DZIP1LQ8IYY4 767 aaKnown RBP10.19□□□□□ -0.78
HPS4-205ENST00000429411 RIPK4P57078 832 aa10.19□□□□□ -0.78
HPS4-205ENST00000429411 LNPKQ9C0E8 428 aa10.19□□□□□ -0.78
HPS4-205ENST00000429411 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
HPS4-205ENST00000429411 NKTRP30414 1462 aaKnown RBP10.18□□□□□ -0.78
HPS4-205ENST00000429411 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
HPS4-205ENST00000429411 GPRASP1Q5JY77 1395 aa10.18□□□□□ -0.78
HPS4-205ENST00000429411 CROCC2H7BZ55 1655 aa10.18□□□□□ -0.78
HPS4-205ENST00000429411 KDM2BQ8NHM5 1336 aa10.18□□□□□ -0.78
HPS4-205ENST00000429411 HECW2Q9P2P5 1572 aa10.18□□□□□ -0.78
HPS4-205ENST00000429411 RARSP54136 660 aaKnown RBP10.18□□□□□ -0.78
HPS4-205ENST00000429411 EVC2Q86UK5 1308 aa10.18□□□□□ -0.78
HPS4-205ENST00000429411 PDE3AQ14432 1141 aa10.18□□□□□ -0.78
HPS4-205ENST00000429411 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
HPS4-205ENST00000429411 BLMP54132 1417 aaPredicted RBP10.17□□□□□ -0.78
HPS4-205ENST00000429411 C1orf115Q9H7X2 142 aa10.17□□□□□ -0.78
HPS4-205ENST00000429411 NOS1P29475 1434 aa10.16□□□□□ -0.78
HPS4-205ENST00000429411 HSP90AB1P08238 724 aaKnown RBP10.16□□□□□ -0.78
HPS4-205ENST00000429411 HDGFP51858 240 aaKnown RBP10.16□□□□□ -0.78
HPS4-205ENST00000429411 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
HPS4-205ENST00000429411 ZMYM4Q5VZL5 1548 aa10.16□□□□□ -0.78
HPS4-205ENST00000429411 ASXL1Q8IXJ9 1541 aa10.16□□□□□ -0.78
HPS4-205ENST00000429411 HSCBQ8IWL3 235 aa10.16□□□□□ -0.78
HPS4-205ENST00000429411 RIMS1Q86UR5 1692 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms