RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 BRD2P25440 801 aaKnown RBP7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 FAM193AP78312 1265 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 MMRN1Q13201 1228 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 EXOC6Q8TAG9 804 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 POGKQ9P215 609 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 ANKRD30AQ9BXX3 1397 aa7.07□□□□□ -1.28
VTI1BP4-201ENST00000427516 MYBBP1AQ9BQG0 1328 aaKnown RBP7.06□□□□□ -1.28
VTI1BP4-201ENST00000427516 MCM4P33991 863 aa7.06□□□□□ -1.28
VTI1BP4-201ENST00000427516 RGS3P49796 1198 aa7.06□□□□□ -1.28
VTI1BP4-201ENST00000427516 SLC20A2Q08357 652 aa7.06□□□□□ -1.28
VTI1BP4-201ENST00000427516 CREBRFQ8IUR6 639 aa7.06□□□□□ -1.28
VTI1BP4-201ENST00000427516 KDM5BQ9UGL1 1544 aa7.06□□□□□ -1.28
VTI1BP4-201ENST00000427516 THOC2Q8NI27 1593 aaKnown RBP7.05□□□□□ -1.28
VTI1BP4-201ENST00000427516 FGD6Q6ZV73 1430 aa7.05□□□□□ -1.28
VTI1BP4-201ENST00000427516 SASS6Q6UVJ0 657 aa7.05□□□□□ -1.28
VTI1BP4-201ENST00000427516 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
VTI1BP4-201ENST00000427516 ZNF687Q8N1G0 1237 aa7.05□□□□□ -1.28
VTI1BP4-201ENST00000427516 KDM2BQ8NHM5 1336 aa7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 TRAK2O60296 914 aa7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 ZNF500O60304 480 aaPredicted RBP7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 C8orf34Q49A92 452 aa7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 PRIMPOLQ96LW4 560 aa7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 PPP1R9BQ96SB3 815 aa7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 DNAJC2Q99543 621 aaKnown RBP7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 HIRIP3Q9BW71 556 aaPredicted RBP7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 GPHNQ9NQX3 736 aaPredicted RBP7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 PCDHGA4Q9Y5G9 962 aa7.04□□□□□ -1.28
VTI1BP4-201ENST00000427516 MYOM3Q5VTT5 1437 aa7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 GTPBP6O43824 516 aaPredicted RBP7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 RBM25P49756 843 aaKnown RBP7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 FOXK1P85037 733 aa7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 PPP4R3BQ5MIZ7 849 aa7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 NGEFQ8N5V2 710 aa7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 PNISRQ8TF01 805 aaKnown RBP7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 FAM13BQ9NYF5 915 aa7.03□□□□□ -1.28
VTI1BP4-201ENST00000427516 KIF7Q2M1P5 1343 aa7.02□□□□□ -1.28
VTI1BP4-201ENST00000427516 NUDT7P0C024 238 aa7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 DNTTIP2Q5QJE6 756 aaKnown RBP7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 AXDND1Q5T1B0 1012 aaPredicted RBP7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 NLRP13Q86W25 1043 aa7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 TEX2Q8IWB9 1127 aa7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 PDCL2Q8N4E4 241 aa7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 CCDC39Q9UFE4 941 aa7.02□□□□□ -1.29
VTI1BP4-201ENST00000427516 KIF14Q15058 1648 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 RPRD2Q5VT52 1461 aaKnown RBP7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 UQCRHLA0A096LP55 91 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 KDM4FA0A1W2PPD8 638 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 UQCRHP07919 91 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 CHAF1AQ13111 956 aaPredicted RBP7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 DSG2Q14126 1118 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 HSCBQ8IWL3 235 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 PLPP6Q8IY26 295 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 STAC3Q96MF2 364 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 CFAP44Q96MT7 982 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 BCCIPQ9P287 314 aaKnown RBP eCLIP7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 KIF3AQ9Y496 699 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 NAIPQ13075 1403 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 SPATA31E1Q6ZUB1 1445 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 CASKIN1Q8WXD9 1431 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 CGNL1Q0VF96 1302 aa7.01□□□□□ -1.29
VTI1BP4-201ENST00000427516 DHX29Q7Z478 1369 aaKnown RBP7□□□□□ -1.29
VTI1BP4-201ENST00000427516 GTF2E1P29083 439 aaPredicted RBP7□□□□□ -1.29
VTI1BP4-201ENST00000427516 IRX3P78415 501 aaPredicted RBP7□□□□□ -1.29
VTI1BP4-201ENST00000427516 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
VTI1BP4-201ENST00000427516 PTCD2Q8WV60 388 aaKnown RBP7□□□□□ -1.29
VTI1BP4-201ENST00000427516 FEZ1Q99689 392 aa7□□□□□ -1.29
VTI1BP4-201ENST00000427516 ANTXR1Q9H6X2 564 aa7□□□□□ -1.29
VTI1BP4-201ENST00000427516 KIAA1107Q9UPP5 1409 aa7□□□□□ -1.29
VTI1BP4-201ENST00000427516 POLA1P09884 1462 aaPredicted RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 SUPT6HQ7KZ85 1726 aaKnown RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 GABPB1Q06547 395 aaPredicted RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 ARID3AQ99856 593 aa6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 SLKQ9H2G2 1235 aaPredicted RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 NOL7Q9UMY1 257 aaKnown RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 LHX6Q9UPM6 363 aa6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 EHBP1L1Q8N3D4 1523 aa6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 BLMP54132 1417 aaPredicted RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 YEATS2Q9ULM3 1422 aa6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 PCF11O94913 1555 aaKnown RBP6.99□□□□□ -1.29
VTI1BP4-201ENST00000427516 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 KIF21AQ7Z4S6 1674 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 SLC4A3P48751 1232 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 CTR9Q6PD62 1173 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 PMFBP1Q8TBY8 1022 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 CRISPLD2Q9H0B8 497 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 UHRF1BP1LA0JNW5 1464 aa6.98□□□□□ -1.29
VTI1BP4-201ENST00000427516 CLASP1Q7Z460 1538 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 CLGNO14967 610 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 CCDC184Q52MB2 194 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 TBC1D32Q96NH3 1257 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 CRBNQ96SW2 442 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 DIAPH3Q9NSV4 1193 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 CALCOCO1Q9P1Z2 691 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 R3HCC1Q9Y3T6 440 aaKnown RBP6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 NCKAP5LQ9HCH0 1330 aa6.97□□□□□ -1.29
VTI1BP4-201ENST00000427516 MTUS2Q5JR59 1369 aa6.96□□□□□ -1.29
VTI1BP4-201ENST00000427516 TPM3P06753 285 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 ZSCAN20P17040 1043 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms