RNA–Protein interactions for RNA: ENST00000426559.6

STMN1-204, Transcript of stathmin 1, humanhuman

TSL 1 (best) BASIC

Gene STMN1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STMN1-204ENST00000426559 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
STMN1-204ENST00000426559 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
STMN1-204ENST00000426559 TECPR2O15040 1411 aa23.35■■□□□ 1.33
STMN1-204ENST00000426559 LRPPRCP42704 1394 aaKnown RBP23.35■■□□□ 1.33
STMN1-204ENST00000426559 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
STMN1-204ENST00000426559 ADAMTS2O95450 1211 aa23.34■■□□□ 1.33
STMN1-204ENST00000426559 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
STMN1-204ENST00000426559 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.334e-38■□□□□ 9.8
STMN1-204ENST00000426559 CDK12Q9NYV4 1490 aaPredicted RBP23.32■■□□□ 1.32
STMN1-204ENST00000426559 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
STMN1-204ENST00000426559 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
STMN1-204ENST00000426559 KNDC1Q76NI1 1749 aa23.32■■□□□ 1.32
STMN1-204ENST00000426559 QTRT2Q9H974 415 aaKnown RBP23.31■■□□□ 1.32
STMN1-204ENST00000426559 NUTM2FA1L443 756 aa23.3■■□□□ 1.32
STMN1-204ENST00000426559 NGLY1Q96IV0 654 aa23.29■■□□□ 1.32
STMN1-204ENST00000426559 PXDNQ92626 1479 aa23.29■■□□□ 1.32
STMN1-204ENST00000426559 YTHDC2Q9H6S0 1430 aaKnown RBP23.28■■□□□ 1.32
STMN1-204ENST00000426559 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
STMN1-204ENST00000426559 COL22A1Q8NFW1 1626 aaPredicted RBP23.28■■□□□ 1.32
STMN1-204ENST00000426559 FOXO3O43524 673 aa23.27■■□□□ 1.32
STMN1-204ENST00000426559 NPHP3Q7Z494 1330 aa23.27■■□□□ 1.32
STMN1-204ENST00000426559 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.31
STMN1-204ENST00000426559 RGS12O14924 1447 aa23.26■■□□□ 1.31
STMN1-204ENST00000426559 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
STMN1-204ENST00000426559 RBM6P78332 1123 aaKnown RBP23.26■■□□□ 1.31
STMN1-204ENST00000426559 C14orf93Q9H972 538 aaKnown RBP23.26■■□□□ 1.31
STMN1-204ENST00000426559 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
STMN1-204ENST00000426559 FMN2Q9NZ56 1722 aa23.25■■□□□ 1.31
STMN1-204ENST00000426559 MYOM2P54296 1465 aa23.24■■□□□ 1.31
STMN1-204ENST00000426559 ACIN1Q9UKV3 1341 aaKnown RBP23.23■■□□□ 1.31
STMN1-204ENST00000426559 USP21Q9UK80 565 aa23.22■■□□□ 1.31
STMN1-204ENST00000426559 FNBP4Q8N3X1 1017 aaPredicted RBP23.21■■□□□ 1.31
STMN1-204ENST00000426559 SIRT1Q96EB6 747 aa23.21■■□□□ 1.31
STMN1-204ENST00000426559 RGPD8O14715 1765 aaPredicted RBP23.2■■□□□ 1.3
STMN1-204ENST00000426559 MARF1Q9Y4F3 1742 aaKnown RBP23.18■■□□□ 1.3
STMN1-204ENST00000426559 DHX57Q6P158 1386 aaKnown RBP23.17■■□□□ 1.3
STMN1-204ENST00000426559 TRPC5Q9UL62 973 aaPredicted RBP23.16■■□□□ 1.3
STMN1-204ENST00000426559 ATRNO75882 1429 aa23.16■■□□□ 1.3
STMN1-204ENST00000426559 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
STMN1-204ENST00000426559 SAFB2Q14151 953 aaKnown RBP eCLIP23.15■■□□□ 1.3
STMN1-204ENST00000426559 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
STMN1-204ENST00000426559 SPATA31A3Q5VYP0 1347 aa23.14■■□□□ 1.3
STMN1-204ENST00000426559 BCL9LQ86UU0 1499 aa23.14■■□□□ 1.29
STMN1-204ENST00000426559 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
STMN1-204ENST00000426559 ADGRB1O14514 1584 aa23.12■■□□□ 1.29
STMN1-204ENST00000426559 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
STMN1-204ENST00000426559 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
STMN1-204ENST00000426559 USP32Q8NFA0 1604 aa23.08■■□□□ 1.29
STMN1-204ENST00000426559 KDM2AQ9Y2K7 1162 aa23.08■■□□□ 1.29
STMN1-204ENST00000426559 POGKQ9P215 609 aa23.07■■□□□ 1.28
STMN1-204ENST00000426559 TRAK1Q9UPV9 953 aa23.06■■□□□ 1.28
STMN1-204ENST00000426559 SLIT2O94813 1529 aa23.05■■□□□ 1.28
STMN1-204ENST00000426559 CABLES1Q8TDN4 633 aa23.05■■□□□ 1.28
STMN1-204ENST00000426559 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
STMN1-204ENST00000426559 TNS3Q68CZ2 1445 aa23.05■■□□□ 1.28
STMN1-204ENST00000426559 ATAD2Q6PL18 1390 aa23.04■■□□□ 1.28
STMN1-204ENST00000426559 GJD4Q96KN9 370 aaPredicted RBP23.04■■□□□ 1.28
STMN1-204ENST00000426559 ADGRB2O60241 1585 aa23.04■■□□□ 1.28
STMN1-204ENST00000426559 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.04■■□□□ 1.28
STMN1-204ENST00000426559 PMFBP1Q8TBY8 1022 aa23.03■■□□□ 1.28
STMN1-204ENST00000426559 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
STMN1-204ENST00000426559 PLEKHG5O94827 1062 aa23.02■■□□□ 1.28
STMN1-204ENST00000426559 HRCP23327 699 aa23.02■■□□□ 1.28
STMN1-204ENST00000426559 PSME1Q06323 249 aa23.02■■□□□ 1.28
STMN1-204ENST00000426559 SBNO1A3KN83 1393 aa23.01■■□□□ 1.27
STMN1-204ENST00000426559 ANKARQ7Z5J8 1434 aa23.01■■□□□ 1.27
STMN1-204ENST00000426559 EP400Q96L91 3159 aa23.01■■□□□ 1.27
STMN1-204ENST00000426559 UNC5CLQ8IV45 518 aa23.01■■□□□ 1.27
STMN1-204ENST00000426559 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
STMN1-204ENST00000426559 GLI3P10071 1580 aa23.01■■□□□ 1.27
STMN1-204ENST00000426559 PRR36Q9H6K5 1346 aa23■■□□□ 1.27
STMN1-204ENST00000426559 ABCA3Q99758 1704 aa22.99■■□□□ 1.27
STMN1-204ENST00000426559 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
STMN1-204ENST00000426559 LMOD2Q6P5Q4 547 aa22.98■■□□□ 1.27
STMN1-204ENST00000426559 TRPM3Q9HCF6 1732 aaPredicted RBP22.97■■□□□ 1.27
STMN1-204ENST00000426559 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
STMN1-204ENST00000426559 WASLO00401 505 aaPredicted RBP22.95■■□□□ 1.26
STMN1-204ENST00000426559 ARHGEF10O15013 1369 aa22.95■■□□□ 1.26
STMN1-204ENST00000426559 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
STMN1-204ENST00000426559 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
STMN1-204ENST00000426559 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
STMN1-204ENST00000426559 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
STMN1-204ENST00000426559 BRWD3Q6RI45 1802 aa22.93■■□□□ 1.26
STMN1-204ENST00000426559 NWD2Q9ULI1 1742 aa22.92■■□□□ 1.26
STMN1-204ENST00000426559 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
STMN1-204ENST00000426559 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
STMN1-204ENST00000426559 VPS72Q15906 364 aa22.9■■□□□ 1.26
STMN1-204ENST00000426559 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.26
STMN1-204ENST00000426559 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.25
STMN1-204ENST00000426559 SEPT12Q8IYM1 358 aa22.87■■□□□ 1.25
STMN1-204ENST00000426559 ATP7BP35670 1465 aa22.86■■□□□ 1.25
STMN1-204ENST00000426559 NGDNQ8NEJ9 315 aaKnown RBP22.86■■□□□ 1.25
STMN1-204ENST00000426559 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
STMN1-204ENST00000426559 CRYBG1Q9Y4K1 1723 aa22.85■■□□□ 1.25
STMN1-204ENST00000426559 ONECUT3O60422 494 aaPredicted RBP22.85■■□□□ 1.25
STMN1-204ENST00000426559 CCDC125Q86Z20 511 aa22.85■■□□□ 1.25
STMN1-204ENST00000426559 NUDT16Q96DE0 195 aaKnown RBP22.85■■□□□ 1.25
STMN1-204ENST00000426559 CCDC9Q9Y3X0 531 aaKnown RBP22.85■■□□□ 1.25
STMN1-204ENST00000426559 SRCAPQ6ZRS2 3230 aa22.85■■□□□ 1.25
STMN1-204ENST00000426559 ITSN1Q15811 1721 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms