RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 SOS2Q07890 1332 aaPredicted RBP26.35■■□□□ 1.81
GPC1-203ENST00000425056 ABCC11Q96J66 1382 aa26.34■■□□□ 1.81
GPC1-203ENST00000425056 RAB3GAP2Q9H2M9 1393 aa26.34■■□□□ 1.81
GPC1-203ENST00000425056 MYOM2P54296 1465 aa26.34■■□□□ 1.81
GPC1-203ENST00000425056 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
GPC1-203ENST00000425056 AFF2P51816 1311 aa26.32■■□□□ 1.8
GPC1-203ENST00000425056 COL22A1Q8NFW1 1626 aaPredicted RBP26.31■■□□□ 1.8
GPC1-203ENST00000425056 YTHDC2Q9H6S0 1430 aaKnown RBP26.31■■□□□ 1.8
GPC1-203ENST00000425056 STK26Q9P289 416 aa26.3■■□□□ 1.8
GPC1-203ENST00000425056 CDK12Q9NYV4 1490 aaPredicted RBP26.3■■□□□ 1.8
GPC1-203ENST00000425056 FMN2Q9NZ56 1722 aa26.28■■□□□ 1.8
GPC1-203ENST00000425056 TMEM132EQ6IEE7 984 aa26.28■■□□□ 1.8
GPC1-203ENST00000425056 PLEKHH1Q9ULM0 1364 aa26.28■■□□□ 1.8
GPC1-203ENST00000425056 WAPLQ7Z5K2 1190 aa26.27■■□□□ 1.8
GPC1-203ENST00000425056 PXDNQ92626 1479 aa26.27■■□□□ 1.8
GPC1-203ENST00000425056 NPHP3Q7Z494 1330 aa26.26■■□□□ 1.79
GPC1-203ENST00000425056 RXRBP28702 533 aa26.25■■□□□ 1.79
GPC1-203ENST00000425056 C8orf37Q96NL8 207 aa26.25■■□□□ 1.79
GPC1-203ENST00000425056 ESCO1Q5FWF5 840 aa26.24■■□□□ 1.79
GPC1-203ENST00000425056 C14orf93Q9H972 538 aaKnown RBP26.24■■□□□ 1.79
GPC1-203ENST00000425056 KIF1AQ12756 1690 aa26.22■■□□□ 1.79
GPC1-203ENST00000425056 SIRT1Q96EB6 747 aa26.21■■□□□ 1.79
GPC1-203ENST00000425056 ADAMTS2O95450 1211 aa26.19■■□□□ 1.78
GPC1-203ENST00000425056 DHX57Q6P158 1386 aaKnown RBP26.19■■□□□ 1.78
GPC1-203ENST00000425056 CFAP70Q5T0N1 1121 aa26.18■■□□□ 1.78
GPC1-203ENST00000425056 DLC1Q96QB1 1528 aa26.18■■□□□ 1.78
GPC1-203ENST00000425056 MARF1Q9Y4F3 1742 aaKnown RBP26.17■■□□□ 1.78
GPC1-203ENST00000425056 FOXO3O43524 673 aa26.17■■□□□ 1.78
GPC1-203ENST00000425056 RGS12O14924 1447 aa26.16■■□□□ 1.78
GPC1-203ENST00000425056 NUTM2FA1L443 756 aa26.16■■□□□ 1.78
GPC1-203ENST00000425056 NGLY1Q96IV0 654 aa26.16■■□□□ 1.78
GPC1-203ENST00000425056 ADGRB1O14514 1584 aa26.16■■□□□ 1.78
GPC1-203ENST00000425056 QTRT2Q9H974 415 aaKnown RBP26.15■■□□□ 1.78
GPC1-203ENST00000425056 RBM6P78332 1123 aaKnown RBP26.14■■□□□ 1.78
GPC1-203ENST00000425056 UPF1Q92900 1129 aaKnown RBP eCLIP26.14■■□□□ 1.78
GPC1-203ENST00000425056 RGPD8O14715 1765 aaPredicted RBP26.14■■□□□ 1.78
GPC1-203ENST00000425056 XPCQ01831 940 aaPredicted RBP26.13■■□□□ 1.77
GPC1-203ENST00000425056 ADGRB2O60241 1585 aa26.12■■□□□ 1.77
GPC1-203ENST00000425056 HRCP23327 699 aa26.12■■□□□ 1.77
GPC1-203ENST00000425056 FNBP4Q8N3X1 1017 aaPredicted RBP26.11■■□□□ 1.77
GPC1-203ENST00000425056 PRAM1Q96QH2 718 aa26.09■■□□□ 1.77
GPC1-203ENST00000425056 USP21Q9UK80 565 aa26.09■■□□□ 1.77
GPC1-203ENST00000425056 ATRNO75882 1429 aa26.07■■□□□ 1.76
GPC1-203ENST00000425056 SPATA31A3Q5VYP0 1347 aa26.07■■□□□ 1.76
GPC1-203ENST00000425056 USP32Q8NFA0 1604 aa26.06■■□□□ 1.76
GPC1-203ENST00000425056 TRPC5Q9UL62 973 aaPredicted RBP26.06■■□□□ 1.76
GPC1-203ENST00000425056 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.05■■□□□ 1.76
GPC1-203ENST00000425056 ANKARQ7Z5J8 1434 aa26.05■■□□□ 1.76
GPC1-203ENST00000425056 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
GPC1-203ENST00000425056 TNS3Q68CZ2 1445 aa26.04■■□□□ 1.76
GPC1-203ENST00000425056 BCL9LQ86UU0 1499 aa26.04■■□□□ 1.76
GPC1-203ENST00000425056 STAC3Q96MF2 364 aa26.03■■□□□ 1.76
GPC1-203ENST00000425056 PHF8Q9UPP1 1060 aa26.03■■□□□ 1.76
GPC1-203ENST00000425056 KRT28Q7Z3Y7 464 aa26.02■■□□□ 1.76
GPC1-203ENST00000425056 DCAF11Q8TEB1 546 aa26.02■■□□□ 1.76
GPC1-203ENST00000425056 POGKQ9P215 609 aa26.01■■□□□ 1.75
GPC1-203ENST00000425056 ABCA3Q99758 1704 aa26■■□□□ 1.75
GPC1-203ENST00000425056 KDM2AQ9Y2K7 1162 aa25.99■■□□□ 1.75
GPC1-203ENST00000425056 ARHGEF28Q8N1W1 1705 aaKnown RBP25.99■■□□□ 1.75
GPC1-203ENST00000425056 SBNO1A3KN83 1393 aa25.98■■□□□ 1.75
GPC1-203ENST00000425056 TRAK1Q9UPV9 953 aa25.98■■□□□ 1.75
GPC1-203ENST00000425056 SLIT2O94813 1529 aa25.98■■□□□ 1.75
GPC1-203ENST00000425056 TULP4Q9NRJ4 1543 aa25.97■■□□□ 1.75
GPC1-203ENST00000425056 EIF3AQ14152 1382 aaKnown RBP25.96■■□□□ 1.75
GPC1-203ENST00000425056 PSME1Q06323 249 aa25.96■■□□□ 1.75
GPC1-203ENST00000425056 TRPM3Q9HCF6 1732 aaPredicted RBP25.96■■□□□ 1.75
GPC1-203ENST00000425056 ATAD2Q6PL18 1390 aa25.95■■□□□ 1.74
GPC1-203ENST00000425056 ARHGEF10O15013 1369 aa25.94■■□□□ 1.74
GPC1-203ENST00000425056 KIAA1210Q9ULL0 1709 aa25.92■■□□□ 1.74
GPC1-203ENST00000425056 HIRIP3Q9BW71 556 aaPredicted RBP25.92■■□□□ 1.74
GPC1-203ENST00000425056 PLCH1Q4KWH8 1693 aa25.92■■□□□ 1.74
GPC1-203ENST00000425056 NWD2Q9ULI1 1742 aa25.91■■□□□ 1.74
GPC1-203ENST00000425056 MINK1Q8N4C8 1332 aaPredicted RBP25.91■■□□□ 1.74
GPC1-203ENST00000425056 ALS2Q96Q42 1657 aa25.91■■□□□ 1.74
GPC1-203ENST00000425056 EP400Q96L91 3159 aa25.91■■□□□ 1.74
GPC1-203ENST00000425056 GLI3P10071 1580 aa25.9■■□□□ 1.74
GPC1-203ENST00000425056 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
GPC1-203ENST00000425056 PMFBP1Q8TBY8 1022 aa25.9■■□□□ 1.74
GPC1-203ENST00000425056 GJD4Q96KN9 370 aaPredicted RBP25.9■■□□□ 1.74
GPC1-203ENST00000425056 ITSN1Q15811 1721 aa25.89■■□□□ 1.74
GPC1-203ENST00000425056 UNC5CLQ8IV45 518 aa25.89■■□□□ 1.74
GPC1-203ENST00000425056 RALGAPBQ86X10 1494 aa25.88■■□□□ 1.73
GPC1-203ENST00000425056 WASLO00401 505 aaPredicted RBP25.88■■□□□ 1.73
GPC1-203ENST00000425056 HAP1P54257 671 aaPredicted RBP25.86■■□□□ 1.73
GPC1-203ENST00000425056 CABLES1Q8TDN4 633 aa25.86■■□□□ 1.73
GPC1-203ENST00000425056 ATP7BP35670 1465 aa25.85■■□□□ 1.73
GPC1-203ENST00000425056 GPRASP1Q5JY77 1395 aa25.84■■□□□ 1.73
GPC1-203ENST00000425056 LMOD2Q6P5Q4 547 aa25.84■■□□□ 1.73
GPC1-203ENST00000425056 CRYBG1Q9Y4K1 1723 aa25.83■■□□□ 1.73
GPC1-203ENST00000425056 TOPAZ1Q8N9V7 1692 aa25.81■■□□□ 1.72
GPC1-203ENST00000425056 NRAPQ86VF7 1730 aa25.81■■□□□ 1.72
GPC1-203ENST00000425056 BRWD3Q6RI45 1802 aa25.79■■□□□ 1.72
GPC1-203ENST00000425056 PLEKHG5O94827 1062 aa25.78■■□□□ 1.72
GPC1-203ENST00000425056 VPS72Q15906 364 aa25.78■■□□□ 1.72
GPC1-203ENST00000425056 COL14A1Q05707 1796 aaKnown RBP25.77■■□□□ 1.72
GPC1-203ENST00000425056 NGDNQ8NEJ9 315 aaKnown RBP25.76■■□□□ 1.71
GPC1-203ENST00000425056 NUDT16Q96DE0 195 aaKnown RBP25.75■■□□□ 1.71
GPC1-203ENST00000425056 FAM83GA6ND36 823 aa25.74■■□□□ 1.71
GPC1-203ENST00000425056 CCDC125Q86Z20 511 aa25.72■■□□□ 1.71
GPC1-203ENST00000425056 PHRF1Q9P1Y6 1649 aaKnown RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms