RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
SRPK1-205ENST00000423325 ZMYM3Q14202 1370 aa12.81□□□□□ -0.36
SRPK1-205ENST00000423325 NRXN3Q9Y4C0 1643 aa12.8□□□□□ -0.36
SRPK1-205ENST00000423325 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
SRPK1-205ENST00000423325 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
SRPK1-205ENST00000423325 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRPK1-205ENST00000423325 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
SRPK1-205ENST00000423325 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
SRPK1-205ENST00000423325 CD163L1Q9NR16 1453 aa12.79□□□□□ -0.36
SRPK1-205ENST00000423325 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
SRPK1-205ENST00000423325 RIMS2Q9UQ26 1411 aa12.79□□□□□ -0.36
SRPK1-205ENST00000423325 APAF1O14727 1248 aa12.79□□□□□ -0.36
SRPK1-205ENST00000423325 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
SRPK1-205ENST00000423325 RRP1P56182 461 aaKnown RBP12.79□□□□□ -0.36
SRPK1-205ENST00000423325 METP08581 1390 aa12.78□□□□□ -0.36
SRPK1-205ENST00000423325 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
SRPK1-205ENST00000423325 SRPK2P78362 688 aaKnown RBP12.78□□□□□ -0.36
SRPK1-205ENST00000423325 FBLN1P23142 703 aa12.78□□□□□ -0.36
SRPK1-205ENST00000423325 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
SRPK1-205ENST00000423325 NCKAP5LQ9HCH0 1330 aa12.77□□□□□ -0.37
SRPK1-205ENST00000423325 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
SRPK1-205ENST00000423325 MORC1Q86VD1 984 aa12.77□□□□□ -0.37
SRPK1-205ENST00000423325 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
SRPK1-205ENST00000423325 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
SRPK1-205ENST00000423325 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
SRPK1-205ENST00000423325 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
SRPK1-205ENST00000423325 INSRP06213 1382 aa12.76□□□□□ -0.37
SRPK1-205ENST00000423325 MTHFSP49914 203 aa12.76□□□□□ -0.37
SRPK1-205ENST00000423325 POGKQ9P215 609 aa12.75□□□□□ -0.37
SRPK1-205ENST00000423325 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
SRPK1-205ENST00000423325 RRP7AQ9Y3A4 280 aaKnown RBP12.75□□□□□ -0.37
SRPK1-205ENST00000423325 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
SRPK1-205ENST00000423325 USP32Q8NFA0 1604 aa12.74□□□□□ -0.37
SRPK1-205ENST00000423325 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
SRPK1-205ENST00000423325 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
SRPK1-205ENST00000423325 PDE3BQ13370 1112 aa12.73□□□□□ -0.37
SRPK1-205ENST00000423325 CABP1Q9NZU7 370 aa12.73□□□□□ -0.37
SRPK1-205ENST00000423325 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
SRPK1-205ENST00000423325 SLC24A1O60721 1099 aa12.73□□□□□ -0.37
SRPK1-205ENST00000423325 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
SRPK1-205ENST00000423325 POLR3AO14802 1390 aaPredicted RBP12.73□□□□□ -0.37
SRPK1-205ENST00000423325 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
SRPK1-205ENST00000423325 FYB1O15117 783 aa12.72□□□□□ -0.37
SRPK1-205ENST00000423325 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
SRPK1-205ENST00000423325 LTKP29376 864 aa12.71□□□□□ -0.37
SRPK1-205ENST00000423325 TNRQ92752 1358 aa12.71□□□□□ -0.37
SRPK1-205ENST00000423325 ABCC11Q96J66 1382 aa12.71□□□□□ -0.37
SRPK1-205ENST00000423325 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.37
SRPK1-205ENST00000423325 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
SRPK1-205ENST00000423325 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
SRPK1-205ENST00000423325 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
SRPK1-205ENST00000423325 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
SRPK1-205ENST00000423325 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
SRPK1-205ENST00000423325 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
SRPK1-205ENST00000423325 CRBNQ96SW2 442 aa12.69□□□□□ -0.38
SRPK1-205ENST00000423325 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.68□□□□□ -0.384e-7■■■□□ 14.6
SRPK1-205ENST00000423325 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
SRPK1-205ENST00000423325 IQSEC2Q5JU85 1478 aa12.68□□□□□ -0.38
SRPK1-205ENST00000423325 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
SRPK1-205ENST00000423325 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
SRPK1-205ENST00000423325 BCAR3O75815 825 aa12.67□□□□□ -0.38
SRPK1-205ENST00000423325 ADAMTS13Q76LX8 1427 aa12.67□□□□□ -0.38
SRPK1-205ENST00000423325 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
SRPK1-205ENST00000423325 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
SRPK1-205ENST00000423325 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
SRPK1-205ENST00000423325 SLC26A8Q96RN1 970 aa12.66□□□□□ -0.38
SRPK1-205ENST00000423325 ATAD2Q6PL18 1390 aa12.66□□□□□ -0.38
SRPK1-205ENST00000423325 DLC1Q96QB1 1528 aa12.66□□□□□ -0.38
SRPK1-205ENST00000423325 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
SRPK1-205ENST00000423325 PRR36Q9H6K5 1346 aa12.65□□□□□ -0.38
SRPK1-205ENST00000423325 C3P01024 1663 aa12.65□□□□□ -0.38
SRPK1-205ENST00000423325 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
SRPK1-205ENST00000423325 PTPRUQ92729 1446 aa12.64□□□□□ -0.39
SRPK1-205ENST00000423325 MSH5O43196 834 aa12.64□□□□□ -0.39
SRPK1-205ENST00000423325 U2AF1L5P0DN76 240 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-205ENST00000423325 U2AF1Q01081 240 aaKnown RBP eCLIP12.63□□□□□ -0.39
SRPK1-205ENST00000423325 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-205ENST00000423325 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
SRPK1-205ENST00000423325 CPS1P31327 1500 aa12.63□□□□□ -0.39
SRPK1-205ENST00000423325 NME9Q86XW9 330 aa12.63□□□□□ -0.39
SRPK1-205ENST00000423325 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
SRPK1-205ENST00000423325 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
SRPK1-205ENST00000423325 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
SRPK1-205ENST00000423325 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
SRPK1-205ENST00000423325 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
SRPK1-205ENST00000423325 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
SRPK1-205ENST00000423325 NSD2O96028 1365 aa12.62□□□□□ -0.39
SRPK1-205ENST00000423325 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
SRPK1-205ENST00000423325 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SRPK1-205ENST00000423325 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
SRPK1-205ENST00000423325 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
SRPK1-205ENST00000423325 NKTRP30414 1462 aaKnown RBP12.61□□□□□ -0.39
SRPK1-205ENST00000423325 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
SRPK1-205ENST00000423325 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
SRPK1-205ENST00000423325 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
SRPK1-205ENST00000423325 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
SRPK1-205ENST00000423325 FER1L4A9Z1Z3 1794 aa12.6□□□□□ -0.39
SRPK1-205ENST00000423325 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.6□□□□□ -0.39
SRPK1-205ENST00000423325 KNDC1Q76NI1 1749 aa12.59□□□□□ -0.39
SRPK1-205ENST00000423325 TECPR2O15040 1411 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms