RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
UPF3AP3-201ENST00000420996 ESCO1Q5FWF5 840 aa25.27■■□□□ 1.64
UPF3AP3-201ENST00000420996 USP21Q9UK80 565 aa25.27■■□□□ 1.64
UPF3AP3-201ENST00000420996 NPHP3Q7Z494 1330 aa25.27■■□□□ 1.64
UPF3AP3-201ENST00000420996 CCDC144AA2RUR9 1427 aa25.27■■□□□ 1.64
UPF3AP3-201ENST00000420996 FNBP4Q8N3X1 1017 aaPredicted RBP25.26■■□□□ 1.63
UPF3AP3-201ENST00000420996 IFT172Q9UG01 1749 aa25.24■■□□□ 1.63
UPF3AP3-201ENST00000420996 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
UPF3AP3-201ENST00000420996 ANKRD30BQ9BXX2 1392 aa25.24■■□□□ 1.63
UPF3AP3-201ENST00000420996 RGL3Q3MIN7 710 aa25.24■■□□□ 1.63
UPF3AP3-201ENST00000420996 TRPC5Q9UL62 973 aaPredicted RBP25.24■■□□□ 1.63
UPF3AP3-201ENST00000420996 TECPR2O15040 1411 aa25.23■■□□□ 1.63
UPF3AP3-201ENST00000420996 PXDNQ92626 1479 aa25.22■■□□□ 1.63
UPF3AP3-201ENST00000420996 LRPPRCP42704 1394 aaKnown RBP25.22■■□□□ 1.63
UPF3AP3-201ENST00000420996 STK26Q9P289 416 aa25.22■■□□□ 1.63
UPF3AP3-201ENST00000420996 MYOM2P54296 1465 aa25.21■■□□□ 1.63
UPF3AP3-201ENST00000420996 WAPLQ7Z5K2 1190 aa25.21■■□□□ 1.63
UPF3AP3-201ENST00000420996 MPHOSPH9Q99550 1183 aa25.21■■□□□ 1.63
UPF3AP3-201ENST00000420996 ABCC11Q96J66 1382 aa25.2■■□□□ 1.63
UPF3AP3-201ENST00000420996 FOXO3O43524 673 aa25.2■■□□□ 1.62
UPF3AP3-201ENST00000420996 KNDC1Q76NI1 1749 aa25.19■■□□□ 1.62
UPF3AP3-201ENST00000420996 MARF1Q9Y4F3 1742 aaKnown RBP25.19■■□□□ 1.62
UPF3AP3-201ENST00000420996 ATRNO75882 1429 aa25.19■■□□□ 1.62
UPF3AP3-201ENST00000420996 ATAD2Q6PL18 1390 aa25.18■■□□□ 1.62
UPF3AP3-201ENST00000420996 TMEM132EQ6IEE7 984 aa25.17■■□□□ 1.62
UPF3AP3-201ENST00000420996 PIK3C2GO75747 1445 aa25.16■■□□□ 1.62
UPF3AP3-201ENST00000420996 XPCQ01831 940 aaPredicted RBP25.16■■□□□ 1.62
UPF3AP3-201ENST00000420996 NUTM2FA1L443 756 aa25.15■■□□□ 1.62
UPF3AP3-201ENST00000420996 PLEKHH1Q9ULM0 1364 aa25.14■■□□□ 1.61
UPF3AP3-201ENST00000420996 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.61
UPF3AP3-201ENST00000420996 BCL9LQ86UU0 1499 aa25.14■■□□□ 1.61
UPF3AP3-201ENST00000420996 YTHDC2Q9H6S0 1430 aaKnown RBP25.12■■□□□ 1.61
UPF3AP3-201ENST00000420996 SIRT1Q96EB6 747 aa25.11■■□□□ 1.61
UPF3AP3-201ENST00000420996 KIF1AQ12756 1690 aa25.1■■□□□ 1.61
UPF3AP3-201ENST00000420996 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
UPF3AP3-201ENST00000420996 SPATA31A3Q5VYP0 1347 aa25.09■■□□□ 1.61
UPF3AP3-201ENST00000420996 C14orf93Q9H972 538 aaKnown RBP25.08■■□□□ 1.61
UPF3AP3-201ENST00000420996 GJD4Q96KN9 370 aaPredicted RBP25.07■■□□□ 1.6
UPF3AP3-201ENST00000420996 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.06■■□□□ 1.6
UPF3AP3-201ENST00000420996 RGPD8O14715 1765 aaPredicted RBP25.05■■□□□ 1.6
UPF3AP3-201ENST00000420996 KRT28Q7Z3Y7 464 aa25.05■■□□□ 1.6
UPF3AP3-201ENST00000420996 DHX57Q6P158 1386 aaKnown RBP25.04■■□□□ 1.6
UPF3AP3-201ENST00000420996 NRXN1Q9ULB1 1477 aa25.03■■□□□ 1.6
UPF3AP3-201ENST00000420996 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
UPF3AP3-201ENST00000420996 UNC5CLQ8IV45 518 aa25.03■■□□□ 1.6
UPF3AP3-201ENST00000420996 SLIT2O94813 1529 aa25.02■■□□□ 1.6
UPF3AP3-201ENST00000420996 CFAP70Q5T0N1 1121 aa25.02■■□□□ 1.6
UPF3AP3-201ENST00000420996 PHF8Q9UPP1 1060 aa25.02■■□□□ 1.6
UPF3AP3-201ENST00000420996 PSME1Q06323 249 aa25■■□□□ 1.59
UPF3AP3-201ENST00000420996 USP32Q8NFA0 1604 aa25■■□□□ 1.59
UPF3AP3-201ENST00000420996 RALGAPBQ86X10 1494 aa24.98■■□□□ 1.59
UPF3AP3-201ENST00000420996 TNS3Q68CZ2 1445 aa24.98■■□□□ 1.59
UPF3AP3-201ENST00000420996 GLI3P10071 1580 aa24.97■■□□□ 1.59
UPF3AP3-201ENST00000420996 PRAM1Q96QH2 718 aa24.97■■□□□ 1.59
UPF3AP3-201ENST00000420996 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
UPF3AP3-201ENST00000420996 SBNO1A3KN83 1393 aa24.95■■□□□ 1.59
UPF3AP3-201ENST00000420996 HAP1P54257 671 aaPredicted RBP24.95■■□□□ 1.58
UPF3AP3-201ENST00000420996 EP400Q96L91 3159 aa24.95■■□□□ 1.58
UPF3AP3-201ENST00000420996 SAFB2Q14151 953 aaKnown RBP eCLIP24.94■■□□□ 1.58
UPF3AP3-201ENST00000420996 DLC1Q96QB1 1528 aa24.93■■□□□ 1.58
UPF3AP3-201ENST00000420996 CABLES1Q8TDN4 633 aa24.93■■□□□ 1.58
UPF3AP3-201ENST00000420996 BRWD3Q6RI45 1802 aa24.92■■□□□ 1.58
UPF3AP3-201ENST00000420996 POGKQ9P215 609 aa24.92■■□□□ 1.58
UPF3AP3-201ENST00000420996 NWD2Q9ULI1 1742 aa24.92■■□□□ 1.58
UPF3AP3-201ENST00000420996 ARHGEF10O15013 1369 aa24.92■■□□□ 1.58
UPF3AP3-201ENST00000420996 ANKARQ7Z5J8 1434 aa24.91■■□□□ 1.58
UPF3AP3-201ENST00000420996 ABCA3Q99758 1704 aa24.9■■□□□ 1.58
UPF3AP3-201ENST00000420996 VPS72Q15906 364 aa24.9■■□□□ 1.58
UPF3AP3-201ENST00000420996 LMOD2Q6P5Q4 547 aa24.9■■□□□ 1.58
UPF3AP3-201ENST00000420996 PLCH1Q4KWH8 1693 aa24.9■■□□□ 1.58
UPF3AP3-201ENST00000420996 ADGRB2O60241 1585 aa24.88■■□□□ 1.57
UPF3AP3-201ENST00000420996 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
UPF3AP3-201ENST00000420996 PLEKHG5O94827 1062 aa24.87■■□□□ 1.57
UPF3AP3-201ENST00000420996 SEPT12Q8IYM1 358 aa24.87■■□□□ 1.57
UPF3AP3-201ENST00000420996 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
UPF3AP3-201ENST00000420996 RAB3GAP2Q9H2M9 1393 aa24.87■■□□□ 1.57
UPF3AP3-201ENST00000420996 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
UPF3AP3-201ENST00000420996 ONECUT3O60422 494 aaPredicted RBP24.86■■□□□ 1.57
UPF3AP3-201ENST00000420996 FAM83GA6ND36 823 aa24.84■■□□□ 1.57
UPF3AP3-201ENST00000420996 TRAK1Q9UPV9 953 aa24.84■■□□□ 1.57
UPF3AP3-201ENST00000420996 CCDC9Q9Y3X0 531 aaKnown RBP24.84■■□□□ 1.57
UPF3AP3-201ENST00000420996 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
UPF3AP3-201ENST00000420996 HIRIP3Q9BW71 556 aaPredicted RBP24.82■■□□□ 1.56
UPF3AP3-201ENST00000420996 EIF3AQ14152 1382 aaKnown RBP24.81■■□□□ 1.56
UPF3AP3-201ENST00000420996 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 SRCAPQ6ZRS2 3230 aa24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 SF3B2Q13435 895 aaKnown RBP24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 STAC3Q96MF2 364 aa24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 KDM2AQ9Y2K7 1162 aa24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 ALS2Q96Q42 1657 aa24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 MINK1Q8N4C8 1332 aaPredicted RBP24.8■■□□□ 1.56
UPF3AP3-201ENST00000420996 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
UPF3AP3-201ENST00000420996 PRR36Q9H6K5 1346 aa24.79■■□□□ 1.56
UPF3AP3-201ENST00000420996 TULP4Q9NRJ4 1543 aa24.78■■□□□ 1.56
UPF3AP3-201ENST00000420996 KRT27Q7Z3Y8 459 aa24.78■■□□□ 1.56
UPF3AP3-201ENST00000420996 DEFB132Q7Z7B7 95 aa24.78■■□□□ 1.56
UPF3AP3-201ENST00000420996 NRAPQ86VF7 1730 aa24.78■■□□□ 1.56
UPF3AP3-201ENST00000420996 WASLO00401 505 aaPredicted RBP24.77■■□□□ 1.56
UPF3AP3-201ENST00000420996 COL14A1Q05707 1796 aaKnown RBP24.75■■□□□ 1.55
UPF3AP3-201ENST00000420996 BTG4Q9NY30 223 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms