RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
ABCA13-202ENST00000417403 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
ABCA13-202ENST00000417403 RGPD8O14715 1765 aaPredicted RBP9.43□□□□□ -0.9
ABCA13-202ENST00000417403 XIRP1Q702N8 1843 aaKnown RBP9.43□□□□□ -0.9
ABCA13-202ENST00000417403 PLEKHH1Q9ULM0 1364 aa9.43□□□□□ -0.9
ABCA13-202ENST00000417403 TMEM132AQ24JP5 1023 aa9.43□□□□□ -0.9
ABCA13-202ENST00000417403 MARF1Q9Y4F3 1742 aaKnown RBP9.43□□□□□ -0.9
ABCA13-202ENST00000417403 MON2Q7Z3U7 1717 aa9.43□□□□□ -0.9
ABCA13-202ENST00000417403 LRPPRCP42704 1394 aaKnown RBP9.42□□□□□ -0.9
ABCA13-202ENST00000417403 ABCC11Q96J66 1382 aa9.42□□□□□ -0.9
ABCA13-202ENST00000417403 KDM4FA0A1W2PPD8 638 aa9.42□□□□□ -0.9
ABCA13-202ENST00000417403 FAM135BQ49AJ0 1406 aa9.41□□□□□ -0.9
ABCA13-202ENST00000417403 LMTK3Q96Q04 1460 aa9.41□□□□□ -0.9
ABCA13-202ENST00000417403 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
ABCA13-202ENST00000417403 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
ABCA13-202ENST00000417403 ROBO2Q9HCK4 1378 aa9.4□□□□□ -0.91
ABCA13-202ENST00000417403 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
ABCA13-202ENST00000417403 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
ABCA13-202ENST00000417403 PELP1Q8IZL8 1130 aaKnown RBP9.39□□□□□ -0.91
ABCA13-202ENST00000417403 PARD3Q8TEW0 1356 aa9.39□□□□□ -0.91
ABCA13-202ENST00000417403 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
ABCA13-202ENST00000417403 EIF3AQ14152 1382 aaKnown RBP9.39□□□□□ -0.91
ABCA13-202ENST00000417403 KIF20BQ96Q89 1820 aa9.39□□□□□ -0.91
ABCA13-202ENST00000417403 ERICH6Q7L0X2 663 aa9.38□□□□□ -0.91
ABCA13-202ENST00000417403 PRKRIP1Q9H875 184 aaPredicted RBP9.38□□□□□ -0.91
ABCA13-202ENST00000417403 TRAK1Q9UPV9 953 aa9.38□□□□□ -0.91
ABCA13-202ENST00000417403 USP54Q70EL1 1684 aa9.37□□□□□ -0.91
ABCA13-202ENST00000417403 ATP7BP35670 1465 aa9.37□□□□□ -0.91
ABCA13-202ENST00000417403 CENPJQ9HC77 1338 aaPredicted RBP9.37□□□□□ -0.91
ABCA13-202ENST00000417403 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
ABCA13-202ENST00000417403 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
ABCA13-202ENST00000417403 NKTRP30414 1462 aaKnown RBP9.36□□□□□ -0.91
ABCA13-202ENST00000417403 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
ABCA13-202ENST00000417403 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
ABCA13-202ENST00000417403 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.35□□□□□ -0.91
ABCA13-202ENST00000417403 PUS7Q96PZ0 661 aaKnown RBP9.35□□□□□ -0.91
ABCA13-202ENST00000417403 CDC42BPGQ6DT37 1551 aa9.35□□□□□ -0.91
ABCA13-202ENST00000417403 NPC1L1Q9UHC9 1359 aa9.34□□□□□ -0.91
ABCA13-202ENST00000417403 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
ABCA13-202ENST00000417403 TMF1P82094 1093 aa9.34□□□□□ -0.91
ABCA13-202ENST00000417403 CCER2I3L3R5 266 aa9.34□□□□□ -0.91
ABCA13-202ENST00000417403 WAPLQ7Z5K2 1190 aa9.33□□□□□ -0.92
ABCA13-202ENST00000417403 PRAM1Q96QH2 718 aa9.33□□□□□ -0.92
ABCA13-202ENST00000417403 ESF1Q9H501 851 aaKnown RBP9.33□□□□□ -0.92
ABCA13-202ENST00000417403 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
ABCA13-202ENST00000417403 PIK3R4Q99570 1358 aa9.32□□□□□ -0.92
ABCA13-202ENST00000417403 SENP3Q9H4L4 574 aaPredicted RBP9.32□□□□□ -0.92
ABCA13-202ENST00000417403 PANK3Q9H999 370 aa9.32□□□□□ -0.92
ABCA13-202ENST00000417403 SSH2Q76I76 1423 aa9.31□□□□□ -0.92
ABCA13-202ENST00000417403 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
ABCA13-202ENST00000417403 TXNDC2Q86VQ3 553 aa9.31□□□□□ -0.92
ABCA13-202ENST00000417403 THEMISQ8N1K5 641 aaPredicted RBP9.31□□□□□ -0.92
ABCA13-202ENST00000417403 NPHP4O75161 1426 aaPredicted RBP9.31□□□□□ -0.92
ABCA13-202ENST00000417403 A0A1W2PP64 1363 aa9.31□□□□□ -0.92
ABCA13-202ENST00000417403 PIK3C2AO00443 1686 aa9.3□□□□□ -0.92
ABCA13-202ENST00000417403 ANKRD36BQ8N2N9 1353 aa9.3□□□□□ -0.92
ABCA13-202ENST00000417403 TRPM3Q9HCF6 1732 aaPredicted RBP9.3□□□□□ -0.92
ABCA13-202ENST00000417403 KTN1Q86UP2 1357 aaKnown RBP9.29□□□□□ -0.92
ABCA13-202ENST00000417403 COL3A1P02461 1466 aaPredicted RBP9.29□□□□□ -0.92
ABCA13-202ENST00000417403 SLC26A8Q96RN1 970 aa9.29□□□□□ -0.92
ABCA13-202ENST00000417403 SLC12A5Q9H2X9 1139 aa9.28□□□□□ -0.92
ABCA13-202ENST00000417403 STK26Q9P289 416 aa9.28□□□□□ -0.92
ABCA13-202ENST00000417403 CRYBG1Q9Y4K1 1723 aa9.28□□□□□ -0.92
ABCA13-202ENST00000417403 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
ABCA13-202ENST00000417403 PPP4R3CPQ6ZMV5 832 aa9.28□□□□□ -0.92
ABCA13-202ENST00000417403 NPM2Q86SE8 214 aaKnown RBP9.27□□□□□ -0.92
ABCA13-202ENST00000417403 CABP2Q9NPB3 220 aa9.27□□□□□ -0.92
ABCA13-202ENST00000417403 NINLQ9Y2I6 1382 aa9.27□□□□□ -0.92
ABCA13-202ENST00000417403 PEAK1Q9H792 1746 aa9.27□□□□□ -0.93
ABCA13-202ENST00000417403 NSD3Q9BZ95 1437 aa9.27□□□□□ -0.93
ABCA13-202ENST00000417403 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
ABCA13-202ENST00000417403 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
ABCA13-202ENST00000417403 EVC2Q86UK5 1308 aa9.26□□□□□ -0.93
ABCA13-202ENST00000417403 MINK1Q8N4C8 1332 aaPredicted RBP9.26□□□□□ -0.93
ABCA13-202ENST00000417403 KCNA6P17658 529 aa9.26□□□□□ -0.93
ABCA13-202ENST00000417403 CDK19Q9BWU1 502 aa9.26□□□□□ -0.93
ABCA13-202ENST00000417403 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
ABCA13-202ENST00000417403 ANP32CO43423 234 aa9.25□□□□□ -0.93
ABCA13-202ENST00000417403 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
ABCA13-202ENST00000417403 RGPD1P0DJD0 1748 aa9.25□□□□□ -0.93
ABCA13-202ENST00000417403 WASLO00401 505 aaPredicted RBP9.25□□□□□ -0.93
ABCA13-202ENST00000417403 SAFB2Q14151 953 aaKnown RBP eCLIP9.25□□□□□ -0.93
ABCA13-202ENST00000417403 ATAD2Q6PL18 1390 aa9.25□□□□□ -0.93
ABCA13-202ENST00000417403 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 PPIP5K1Q6PFW1 1433 aa9.24□□□□□ -0.93
ABCA13-202ENST00000417403 ALS2Q96Q42 1657 aa9.24□□□□□ -0.93
ABCA13-202ENST00000417403 BLMP54132 1417 aaPredicted RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 SMG6Q86US8 1419 aaKnown RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 LRRC7Q96NW7 1537 aa9.24□□□□□ -0.93
ABCA13-202ENST00000417403 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 PNISRQ8TF01 805 aaKnown RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
ABCA13-202ENST00000417403 ADGRL3Q9HAR2 1447 aa9.24□□□□□ -0.93
ABCA13-202ENST00000417403 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
ABCA13-202ENST00000417403 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
ABCA13-202ENST00000417403 CDCA8Q53HL2 280 aa9.23□□□□□ -0.93
ABCA13-202ENST00000417403 ANKLE2Q86XL3 938 aa9.23□□□□□ -0.93
ABCA13-202ENST00000417403 ANKARQ7Z5J8 1434 aa9.23□□□□□ -0.93
ABCA13-202ENST00000417403 RALBP1Q15311 655 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms