RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 PARD3Q8TEW0 1356 aa24.58■■□□□ 1.53
RTN4R-202ENST00000416372 TMC1Q8TDI8 760 aa24.57■■□□□ 1.52
RTN4R-202ENST00000416372 KNDC1Q76NI1 1749 aa24.57■■□□□ 1.52
RTN4R-202ENST00000416372 ZNF142P52746 1687 aaPredicted RBP24.56■■□□□ 1.52
RTN4R-202ENST00000416372 SETD1BQ9UPS6 1966 aaKnown RBP24.55■■□□□ 1.52
RTN4R-202ENST00000416372 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
RTN4R-202ENST00000416372 CABP2Q9NPB3 220 aa24.55■■□□□ 1.52
RTN4R-202ENST00000416372 SRPK2P78362 688 aaKnown RBP24.54■■□□□ 1.52
RTN4R-202ENST00000416372 GTF3C3Q9Y5Q9 886 aa24.54■■□□□ 1.52
RTN4R-202ENST00000416372 MED14O60244 1454 aa24.54■■□□□ 1.52
RTN4R-202ENST00000416372 TECPR2O15040 1411 aa24.53■■□□□ 1.52
RTN4R-202ENST00000416372 SLC26A8Q96RN1 970 aa24.53■■□□□ 1.52
RTN4R-202ENST00000416372 SLC12A5Q9H2X9 1139 aa24.53■■□□□ 1.52
RTN4R-202ENST00000416372 PLEKHH1Q9ULM0 1364 aa24.52■■□□□ 1.52
RTN4R-202ENST00000416372 AMER1Q5JTC6 1135 aaPredicted RBP24.52■■□□□ 1.52
RTN4R-202ENST00000416372 SIRT1Q96EB6 747 aa24.52■■□□□ 1.52
RTN4R-202ENST00000416372 FAM9BQ8IZU0 186 aa24.52■■□□□ 1.52
RTN4R-202ENST00000416372 CPS1P31327 1500 aa24.51■■□□□ 1.51
RTN4R-202ENST00000416372 FAM135BQ49AJ0 1406 aa24.51■■□□□ 1.51
RTN4R-202ENST00000416372 BRD4O60885 1362 aaPredicted RBP24.51■■□□□ 1.51
RTN4R-202ENST00000416372 CARD14Q9BXL6 1004 aa24.5■■□□□ 1.51
RTN4R-202ENST00000416372 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
RTN4R-202ENST00000416372 NPC1L1Q9UHC9 1359 aa24.5■■□□□ 1.51
RTN4R-202ENST00000416372 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
RTN4R-202ENST00000416372 CDK19Q9BWU1 502 aa24.49■■□□□ 1.51
RTN4R-202ENST00000416372 DIP2AQ14689 1571 aa24.49■■□□□ 1.51
RTN4R-202ENST00000416372 ATAD2Q6PL18 1390 aa24.48■■□□□ 1.51
RTN4R-202ENST00000416372 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
RTN4R-202ENST00000416372 ANKLE2Q86XL3 938 aa24.46■■□□□ 1.51
RTN4R-202ENST00000416372 NSD3Q9BZ95 1437 aa24.45■■□□□ 1.5
RTN4R-202ENST00000416372 ANKRD36BQ8N2N9 1353 aa24.44■■□□□ 1.5
RTN4R-202ENST00000416372 ROBO2Q9HCK4 1378 aa24.44■■□□□ 1.5
RTN4R-202ENST00000416372 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
RTN4R-202ENST00000416372 PTPRUQ92729 1446 aa24.44■■□□□ 1.5
RTN4R-202ENST00000416372 PNISRQ8TF01 805 aaKnown RBP24.42■■□□□ 1.5
RTN4R-202ENST00000416372 AMOTL2Q9Y2J4 779 aa24.41■■□□□ 1.5
RTN4R-202ENST00000416372 WASLO00401 505 aaPredicted RBP24.4■■□□□ 1.5
RTN4R-202ENST00000416372 USP32Q8NFA0 1604 aa24.39■■□□□ 1.49
RTN4R-202ENST00000416372 PPP2R1AP30153 589 aa24.38■■□□□ 1.49
RTN4R-202ENST00000416372 TERF2IPQ9NYB0 399 aa24.38■■□□□ 1.49
RTN4R-202ENST00000416372 A0A1W2PP64 1363 aa24.36■■□□□ 1.49
RTN4R-202ENST00000416372 PIK3R4Q99570 1358 aa24.36■■□□□ 1.49
RTN4R-202ENST00000416372 CGNL1Q0VF96 1302 aa24.36■■□□□ 1.49
RTN4R-202ENST00000416372 CABP1Q9NZU7 370 aa24.35■■□□□ 1.49
RTN4R-202ENST00000416372 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
RTN4R-202ENST00000416372 HDGFL2Q7Z4V5 671 aaPredicted RBP24.34■■□□□ 1.49
RTN4R-202ENST00000416372 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.34■■□□□ 1.49
RTN4R-202ENST00000416372 XRN1Q8IZH2 1706 aaKnown RBP24.34■■□□□ 1.49
RTN4R-202ENST00000416372 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
RTN4R-202ENST00000416372 CD163L1Q9NR16 1453 aa24.32■■□□□ 1.48
RTN4R-202ENST00000416372 MORC1Q86VD1 984 aa24.31■■□□□ 1.48
RTN4R-202ENST00000416372 NPHP4O75161 1426 aaPredicted RBP24.3■■□□□ 1.48
RTN4R-202ENST00000416372 NUDT16Q96DE0 195 aaKnown RBP24.3■■□□□ 1.48
RTN4R-202ENST00000416372 NSD2O96028 1365 aa24.3■■□□□ 1.48
RTN4R-202ENST00000416372 ATP7BP35670 1465 aa24.3■■□□□ 1.48
RTN4R-202ENST00000416372 PPIP5K1Q6PFW1 1433 aa24.29■■□□□ 1.48
RTN4R-202ENST00000416372 KCNA6P17658 529 aa24.27■■□□□ 1.48
RTN4R-202ENST00000416372 CCDC61Q9Y6R9 512 aa24.26■■□□□ 1.47
RTN4R-202ENST00000416372 CHD2O14647 1828 aaKnown RBP24.26■■□□□ 1.47
RTN4R-202ENST00000416372 NCKAP5LQ9HCH0 1330 aa24.25■■□□□ 1.47
RTN4R-202ENST00000416372 ZBED9Q6R2W3 1325 aa24.24■■□□□ 1.47
RTN4R-202ENST00000416372 PRR36Q9H6K5 1346 aa24.23■■□□□ 1.47
RTN4R-202ENST00000416372 TNNT2P45379 298 aaPredicted RBP24.22■■□□□ 1.47
RTN4R-202ENST00000416372 CDC42BPGQ6DT37 1551 aa24.22■■□□□ 1.47
RTN4R-202ENST00000416372 CPSF1Q10570 1443 aaKnown RBP24.21■■□□□ 1.47
RTN4R-202ENST00000416372 ANKRD26Q9UPS8 1709 aa24.19■■□□□ 1.46
RTN4R-202ENST00000416372 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
RTN4R-202ENST00000416372 FYB1O15117 783 aa24.19■■□□□ 1.46
RTN4R-202ENST00000416372 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
RTN4R-202ENST00000416372 GGNBP2Q9H3C7 697 aa24.19■■□□□ 1.46
RTN4R-202ENST00000416372 ITSN1Q15811 1721 aa24.19■■□□□ 1.46
RTN4R-202ENST00000416372 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
RTN4R-202ENST00000416372 NUTM2FA1L443 756 aa24.18■■□□□ 1.46
RTN4R-202ENST00000416372 INSRP06213 1382 aa24.18■■□□□ 1.46
RTN4R-202ENST00000416372 EDC4Q6P2E9 1401 aaKnown RBP24.17■■□□□ 1.46
RTN4R-202ENST00000416372 AKAP12Q02952 1782 aa24.17■■□□□ 1.46
RTN4R-202ENST00000416372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.16■■□□□ 1.46
RTN4R-202ENST00000416372 ZNF692Q9BU19 519 aaPredicted RBP24.16■■□□□ 1.46
RTN4R-202ENST00000416372 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
RTN4R-202ENST00000416372 POLR3AO14802 1390 aaPredicted RBP24.15■■□□□ 1.46
RTN4R-202ENST00000416372 ADAMTS8Q9UP79 889 aa24.14■■□□□ 1.46
RTN4R-202ENST00000416372 BLMP54132 1417 aaPredicted RBP24.14■■□□□ 1.45
RTN4R-202ENST00000416372 PLEKHG3A1L390 1219 aa24.14■■□□□ 1.45
RTN4R-202ENST00000416372 SENP3-EIF4A1A0A087X0R7 540 aa24.11■■□□□ 1.45
RTN4R-202ENST00000416372 MTHFSP49914 203 aa24.11■■□□□ 1.45
RTN4R-202ENST00000416372 CFAP53Q96M91 514 aa24.11■■□□□ 1.45
RTN4R-202ENST00000416372 NALCNQ8IZF0 1738 aa24.1■■□□□ 1.45
RTN4R-202ENST00000416372 ACEP12821 1306 aa24.1■■□□□ 1.45
RTN4R-202ENST00000416372 FMN2Q9NZ56 1722 aa24.1■■□□□ 1.45
RTN4R-202ENST00000416372 ANKARQ7Z5J8 1434 aa24.09■■□□□ 1.45
RTN4R-202ENST00000416372 NKTRP30414 1462 aaKnown RBP24.09■■□□□ 1.45
RTN4R-202ENST00000416372 NWD1Q149M9 1564 aa24.09■■□□□ 1.45
RTN4R-202ENST00000416372 RGPD8O14715 1765 aaPredicted RBP24.09■■□□□ 1.45
RTN4R-202ENST00000416372 HSPA2P54652 639 aa24.08■■□□□ 1.45
RTN4R-202ENST00000416372 RBM33Q96EV2 1170 aaKnown RBP24.07■■□□□ 1.44
RTN4R-202ENST00000416372 NME9Q86XW9 330 aa24.06■■□□□ 1.44
RTN4R-202ENST00000416372 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
RTN4R-202ENST00000416372 PMFBP1Q8TBY8 1022 aa24.05■■□□□ 1.44
RTN4R-202ENST00000416372 C14orf37Q86TY3 774 aa24.04■■□□□ 1.44
RTN4R-202ENST00000416372 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms