RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
CTNND1-206ENST00000415361 CPLX2Q6PUV4 134 aaKnown RBP10.4□□□□□ -0.74
CTNND1-206ENST00000415361 CABP1Q9NZU7 370 aa10.4□□□□□ -0.74
CTNND1-206ENST00000415361 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
CTNND1-206ENST00000415361 GOLGA6L1Q8N7Z2 621 aa10.4□□□□□ -0.75
CTNND1-206ENST00000415361 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.75
CTNND1-206ENST00000415361 ZKSCAN2Q63HK3 967 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 PTPN23Q9H3S7 1636 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 WDR7Q9Y4E6 1490 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 IDI1Q13907 227 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 H3BQV1 296 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 KLHL34Q8N239 644 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 KIF7Q2M1P5 1343 aa10.39□□□□□ -0.75
CTNND1-206ENST00000415361 RTEL1-TNFRSF6BF6WH68 1400 aa10.38□□□□□ -0.75
CTNND1-206ENST00000415361 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
CTNND1-206ENST00000415361 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
CTNND1-206ENST00000415361 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
CTNND1-206ENST00000415361 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-206ENST00000415361 CENPQQ7L2Z9 268 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-206ENST00000415361 FAM184AQ8NB25 1140 aa10.38□□□□□ -0.75
CTNND1-206ENST00000415361 WAPLQ7Z5K2 1190 aa10.38□□□□□ -0.75
CTNND1-206ENST00000415361 API5Q9BZZ5 524 aaKnown RBP10.38□□□□□ -0.75
CTNND1-206ENST00000415361 ANKRD30BQ9BXX2 1392 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 APAF1O14727 1248 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 PRM3Q9NNZ6 103 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 A0A0U1RQG5 324 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-206ENST00000415361 RIPK4P57078 832 aa10.37□□□□□ -0.75
CTNND1-206ENST00000415361 TPD52L1Q16890 204 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-206ENST00000415361 TPM1P09493 284 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 NBPF8Q3BBV2 869 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 HSP90AB4PQ58FF6 505 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 DIAPH3Q9NSV4 1193 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 PPP6R1Q9UPN7 881 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 NAIPQ13075 1403 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 TRIM29Q14134 588 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 C9orf78Q9NZ63 289 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-206ENST00000415361 PLCH2O75038 1416 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 PRDM11Q9NQV5 511 aa10.36□□□□□ -0.75
CTNND1-206ENST00000415361 NUP153P49790 1475 aaKnown RBP10.36□□□□□ -0.75
CTNND1-206ENST00000415361 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
CTNND1-206ENST00000415361 CCDC7Q96M83 1385 aa10.35□□□□□ -0.75
CTNND1-206ENST00000415361 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
CTNND1-206ENST00000415361 AMOTL2Q9Y2J4 779 aa10.35□□□□□ -0.75
CTNND1-206ENST00000415361 GPATCH8Q9UKJ3 1502 aaKnown RBP10.35□□□□□ -0.75
CTNND1-206ENST00000415361 MTHFSP49914 203 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 DDX19BQ9UMR2 479 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 ZKSCAN1P17029 563 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-206ENST00000415361 AAMPQ13685 434 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 SKOR2Q2VWA4 1001 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-206ENST00000415361 REC8O95072 547 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 RNF20Q5VTR2 975 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
CTNND1-206ENST00000415361 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 RILPL2Q969X0 211 aa10.34□□□□□ -0.75
CTNND1-206ENST00000415361 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-206ENST00000415361 ZC3H6P61129 1189 aaKnown RBP10.34□□□□□ -0.75
CTNND1-206ENST00000415361 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-206ENST00000415361 IFIT2P09913 472 aaKnown RBP10.33□□□□□ -0.76
CTNND1-206ENST00000415361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTNND1-206ENST00000415361 RBM19Q9Y4C8 960 aaKnown RBP10.33□□□□□ -0.76
CTNND1-206ENST00000415361 TNRQ92752 1358 aa10.33□□□□□ -0.76
CTNND1-206ENST00000415361 NCOA1Q15788 1441 aa10.33□□□□□ -0.76
CTNND1-206ENST00000415361 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
CTNND1-206ENST00000415361 DCAF8L1A6NGE4 600 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 HSPA2P54652 639 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 TRDNQ13061 729 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
CTNND1-206ENST00000415361 UGGT2Q9NYU1 1516 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 NUP160Q12769 1436 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 G3BP1Q13283 466 aaKnown RBP eCLIP10.32□□□□□ -0.768e-9■□□□□ 11.1
CTNND1-206ENST00000415361 ANKRD45Q5TZF3 282 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 TSPYL4Q9UJ04 414 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 GNAI1P63096 354 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 CCDC70Q6NSX1 233 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 DDX54Q8TDD1 881 aaKnown RBP10.32□□□□□ -0.76
CTNND1-206ENST00000415361 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 ERICH2A1L162 156 aa10.32□□□□□ -0.76
CTNND1-206ENST00000415361 IPO9Q96P70 1041 aaKnown RBP10.32□□□□□ -0.76
CTNND1-206ENST00000415361 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
CTNND1-206ENST00000415361 GOLGA6L19H0YKK7 550 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 ADAMTS2O95450 1211 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
CTNND1-206ENST00000415361 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 FOXO3O43524 673 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 ADGRF5Q8IZF2 1346 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 ERC2O15083 957 aa10.31□□□□□ -0.76
CTNND1-206ENST00000415361 TATP17735 454 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-206ENST00000415361 SYCP2Q9BX26 1530 aa10.3□□□□□ -0.76
CTNND1-206ENST00000415361 KDM5BQ9UGL1 1544 aa10.3□□□□□ -0.76
CTNND1-206ENST00000415361 FAM161AQ3B820 660 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms