RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 USP32Q8NFA0 1604 aa20.47■□□□□ 0.87
LRCH3-202ENST00000414675 B4GALNT3Q6L9W6 998 aa20.47■□□□□ 0.87
LRCH3-202ENST00000414675 ZMYM3Q14202 1370 aa20.47■□□□□ 0.87
LRCH3-202ENST00000414675 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
LRCH3-202ENST00000414675 PRAM1Q96QH2 718 aa20.46■□□□□ 0.87
LRCH3-202ENST00000414675 PLEKHH1Q9ULM0 1364 aa20.45■□□□□ 0.86
LRCH3-202ENST00000414675 SETD1AO15047 1707 aaKnown RBP20.45■□□□□ 0.86
LRCH3-202ENST00000414675 MINK1Q8N4C8 1332 aaPredicted RBP20.44■□□□□ 0.86
LRCH3-202ENST00000414675 ANKRD36BQ8N2N9 1353 aa20.44■□□□□ 0.86
LRCH3-202ENST00000414675 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
LRCH3-202ENST00000414675 MORC1Q86VD1 984 aa20.43■□□□□ 0.86
LRCH3-202ENST00000414675 CCDC146Q8IYE0 955 aa20.42■□□□□ 0.86
LRCH3-202ENST00000414675 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
LRCH3-202ENST00000414675 MYT1Q01538 1121 aa20.41■□□□□ 0.86
LRCH3-202ENST00000414675 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
LRCH3-202ENST00000414675 POGKQ9P215 609 aa20.41■□□□□ 0.86
LRCH3-202ENST00000414675 NRXN3Q9Y4C0 1643 aa20.4■□□□□ 0.86
LRCH3-202ENST00000414675 POLR3AO14802 1390 aaPredicted RBP20.4■□□□□ 0.86
LRCH3-202ENST00000414675 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
LRCH3-202ENST00000414675 SRPK2P78362 688 aaKnown RBP20.4■□□□□ 0.86
LRCH3-202ENST00000414675 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
LRCH3-202ENST00000414675 ZNF521Q96K83 1311 aa20.4■□□□□ 0.86
LRCH3-202ENST00000414675 SHPRHQ149N8 1683 aa20.39■□□□□ 0.85
LRCH3-202ENST00000414675 A0A1W2PP64 1363 aa20.38■□□□□ 0.85
LRCH3-202ENST00000414675 TNRQ92752 1358 aa20.36■□□□□ 0.85
LRCH3-202ENST00000414675 DLC1Q96QB1 1528 aa20.35■□□□□ 0.85
LRCH3-202ENST00000414675 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
LRCH3-202ENST00000414675 APAF1O14727 1248 aa20.35■□□□□ 0.85
LRCH3-202ENST00000414675 ATAD2Q6PL18 1390 aa20.35■□□□□ 0.85
LRCH3-202ENST00000414675 NINLQ9Y2I6 1382 aa20.35■□□□□ 0.85
LRCH3-202ENST00000414675 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
LRCH3-202ENST00000414675 CDK19Q9BWU1 502 aa20.33■□□□□ 0.85
LRCH3-202ENST00000414675 NSD2O96028 1365 aa20.33■□□□□ 0.85
LRCH3-202ENST00000414675 ABCC11Q96J66 1382 aa20.33■□□□□ 0.85
LRCH3-202ENST00000414675 UBR1Q8IWV7 1749 aa20.33■□□□□ 0.84
LRCH3-202ENST00000414675 METP08581 1390 aa20.32■□□□□ 0.84
LRCH3-202ENST00000414675 MTHFSP49914 203 aa20.32■□□□□ 0.84
LRCH3-202ENST00000414675 DUSP27Q5VZP5 1158 aa20.32■□□□□ 0.84
LRCH3-202ENST00000414675 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.84
LRCH3-202ENST00000414675 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
LRCH3-202ENST00000414675 EXOC6Q8TAG9 804 aa20.29■□□□□ 0.84
LRCH3-202ENST00000414675 RBM19Q9Y4C8 960 aaKnown RBP20.29■□□□□ 0.84
LRCH3-202ENST00000414675 PLIN1O60240 522 aa20.28■□□□□ 0.84
LRCH3-202ENST00000414675 CCDC136Q96JN2 1154 aa20.28■□□□□ 0.84
LRCH3-202ENST00000414675 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
LRCH3-202ENST00000414675 NLRP1Q9C000 1473 aa20.28■□□□□ 0.84
LRCH3-202ENST00000414675 SLFN5Q08AF3 891 aa20.28■□□□□ 0.84
LRCH3-202ENST00000414675 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
LRCH3-202ENST00000414675 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
LRCH3-202ENST00000414675 CABP1Q9NZU7 370 aa20.27■□□□□ 0.84
LRCH3-202ENST00000414675 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.84
LRCH3-202ENST00000414675 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
LRCH3-202ENST00000414675 CEBPAP49715 358 aaPredicted RBP20.27■□□□□ 0.83
LRCH3-202ENST00000414675 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.83
LRCH3-202ENST00000414675 FYB1O15117 783 aa20.25■□□□□ 0.83
LRCH3-202ENST00000414675 TRMT2AQ8IZ69 625 aaKnown RBP20.25■□□□□ 0.83
LRCH3-202ENST00000414675 KNDC1Q76NI1 1749 aa20.24■□□□□ 0.83
LRCH3-202ENST00000414675 TXNDC2Q86VQ3 553 aa20.24■□□□□ 0.83
LRCH3-202ENST00000414675 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
LRCH3-202ENST00000414675 IQSEC2Q5JU85 1478 aa20.23■□□□□ 0.83
LRCH3-202ENST00000414675 KIF20BQ96Q89 1820 aa20.22■□□□□ 0.83
LRCH3-202ENST00000414675 C3P01024 1663 aa20.22■□□□□ 0.83
LRCH3-202ENST00000414675 MED14O60244 1454 aa20.22■□□□□ 0.83
LRCH3-202ENST00000414675 HDGFL2Q7Z4V5 671 aaPredicted RBP20.22■□□□□ 0.83
LRCH3-202ENST00000414675 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
LRCH3-202ENST00000414675 TECPR2O15040 1411 aa20.21■□□□□ 0.83
LRCH3-202ENST00000414675 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
LRCH3-202ENST00000414675 RUNDC1Q96C34 613 aa20.2■□□□□ 0.82
LRCH3-202ENST00000414675 CPS1P31327 1500 aa20.2■□□□□ 0.82
LRCH3-202ENST00000414675 LTKP29376 864 aa20.2■□□□□ 0.82
LRCH3-202ENST00000414675 WASLO00401 505 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-202ENST00000414675 WWC1Q8IX03 1113 aa20.19■□□□□ 0.82
LRCH3-202ENST00000414675 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
LRCH3-202ENST00000414675 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
LRCH3-202ENST00000414675 C20orf194Q5TEA3 1177 aa20.19■□□□□ 0.82
LRCH3-202ENST00000414675 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
LRCH3-202ENST00000414675 ATP7BP35670 1465 aa20.19■□□□□ 0.82
LRCH3-202ENST00000414675 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
LRCH3-202ENST00000414675 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
LRCH3-202ENST00000414675 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
LRCH3-202ENST00000414675 CRBNQ96SW2 442 aa20.18■□□□□ 0.82
LRCH3-202ENST00000414675 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
LRCH3-202ENST00000414675 E9PSI1 815 aa20.17■□□□□ 0.82
LRCH3-202ENST00000414675 NEUROD2Q15784 382 aa20.17■□□□□ 0.82
LRCH3-202ENST00000414675 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
LRCH3-202ENST00000414675 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
LRCH3-202ENST00000414675 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
LRCH3-202ENST00000414675 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-202ENST00000414675 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.822e-6■■■□□ 16.5
LRCH3-202ENST00000414675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.15■□□□□ 0.82
LRCH3-202ENST00000414675 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
LRCH3-202ENST00000414675 PPIP5K1Q6PFW1 1433 aa20.15■□□□□ 0.82
LRCH3-202ENST00000414675 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
LRCH3-202ENST00000414675 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
LRCH3-202ENST00000414675 CPSF1Q10570 1443 aaKnown RBP20.14■□□□□ 0.81
LRCH3-202ENST00000414675 ADGRB2O60241 1585 aa20.13■□□□□ 0.81
LRCH3-202ENST00000414675 NUDT16Q96DE0 195 aaKnown RBP20.13■□□□□ 0.81
LRCH3-202ENST00000414675 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.12■□□□□ 0.81
LRCH3-202ENST00000414675 FBLN1P23142 703 aa20.11■□□□□ 0.81
LRCH3-202ENST00000414675 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms