RNA–Protein interactions for RNA: ENST00000414160.6

C2CD3-204, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene C2CD3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-204ENST00000414160 PDZRN3Q9UPQ7 1066 aa12.98□□□□□ -0.33
C2CD3-204ENST00000414160 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
C2CD3-204ENST00000414160 XRCC6P12956 609 aaKnown RBP eCLIP12.97□□□□□ -0.33
C2CD3-204ENST00000414160 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
C2CD3-204ENST00000414160 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
C2CD3-204ENST00000414160 UPF2Q9HAU5 1272 aaKnown RBP12.97□□□□□ -0.33
C2CD3-204ENST00000414160 MADDQ8WXG6 1647 aa12.96□□□□□ -0.33
C2CD3-204ENST00000414160 RICTORQ6R327 1708 aa12.96□□□□□ -0.33
C2CD3-204ENST00000414160 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
C2CD3-204ENST00000414160 IQGAP1P46940 1657 aa12.96□□□□□ -0.33
C2CD3-204ENST00000414160 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
C2CD3-204ENST00000414160 ARXQ96QS3 562 aa12.96□□□□□ -0.34
C2CD3-204ENST00000414160 RRP7AQ9Y3A4 280 aaKnown RBP12.96□□□□□ -0.34
C2CD3-204ENST00000414160 DUOX2Q9NRD8 1548 aa12.95□□□□□ -0.34
C2CD3-204ENST00000414160 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
C2CD3-204ENST00000414160 MLH3Q9UHC1 1453 aa12.95□□□□□ -0.34
C2CD3-204ENST00000414160 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
C2CD3-204ENST00000414160 MCM4P33991 863 aa12.94□□□□□ -0.34
C2CD3-204ENST00000414160 AAMPQ13685 434 aa12.94□□□□□ -0.34
C2CD3-204ENST00000414160 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
C2CD3-204ENST00000414160 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
C2CD3-204ENST00000414160 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
C2CD3-204ENST00000414160 INO80Q9ULG1 1556 aaPredicted RBP12.93□□□□□ -0.34
C2CD3-204ENST00000414160 FRMPD1Q5SYB0 1578 aa12.93□□□□□ -0.34
C2CD3-204ENST00000414160 HECW2Q9P2P5 1572 aa12.93□□□□□ -0.34
C2CD3-204ENST00000414160 GOLGA6L3A6NEY3 463 aa12.93□□□□□ -0.34
C2CD3-204ENST00000414160 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
C2CD3-204ENST00000414160 MYOM1P52179 1685 aa12.93□□□□□ -0.34
C2CD3-204ENST00000414160 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
C2CD3-204ENST00000414160 POLR3AO14802 1390 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-204ENST00000414160 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
C2CD3-204ENST00000414160 TCP11L2Q8N4U5 519 aa12.92□□□□□ -0.34
C2CD3-204ENST00000414160 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
C2CD3-204ENST00000414160 RWDD1Q9H446 243 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-204ENST00000414160 ZFYVE16Q7Z3T8 1539 aa12.92□□□□□ -0.34
C2CD3-204ENST00000414160 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
C2CD3-204ENST00000414160 ZMYM3Q14202 1370 aa12.91□□□□□ -0.34
C2CD3-204ENST00000414160 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
C2CD3-204ENST00000414160 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
C2CD3-204ENST00000414160 ERVK-7P63135 1459 aa12.9□□□□□ -0.34
C2CD3-204ENST00000414160 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
C2CD3-204ENST00000414160 PTPRTO14522 1441 aa12.89□□□□□ -0.35
C2CD3-204ENST00000414160 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
C2CD3-204ENST00000414160 TRAK2O60296 914 aa12.89□□□□□ -0.35
C2CD3-204ENST00000414160 C22orf23Q9BZE7 217 aa12.89□□□□□ -0.35
C2CD3-204ENST00000414160 MORC1Q86VD1 984 aa12.88□□□□□ -0.35
C2CD3-204ENST00000414160 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
C2CD3-204ENST00000414160 KIDINS220Q9ULH0 1771 aa12.88□□□□□ -0.35
C2CD3-204ENST00000414160 TRPM2O94759 1503 aa12.87□□□□□ -0.35
C2CD3-204ENST00000414160 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
C2CD3-204ENST00000414160 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
C2CD3-204ENST00000414160 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
C2CD3-204ENST00000414160 ADGRF5Q8IZF2 1346 aa12.87□□□□□ -0.35
C2CD3-204ENST00000414160 REREQ9P2R6 1566 aa12.87□□□□□ -0.35
C2CD3-204ENST00000414160 CLCN1P35523 988 aa12.87□□□□□ -0.35
C2CD3-204ENST00000414160 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
C2CD3-204ENST00000414160 ARHGEF40Q8TER5 1519 aa12.86□□□□□ -0.35
C2CD3-204ENST00000414160 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
C2CD3-204ENST00000414160 SPHKAPQ2M3C7 1700 aa12.86□□□□□ -0.35
C2CD3-204ENST00000414160 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
C2CD3-204ENST00000414160 CLTCL1P53675 1640 aa12.85□□□□□ -0.35
C2CD3-204ENST00000414160 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
C2CD3-204ENST00000414160 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
C2CD3-204ENST00000414160 NAP1L5Q96NT1 182 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-204ENST00000414160 MTHFSP49914 203 aa12.84□□□□□ -0.35
C2CD3-204ENST00000414160 MRE11P49959 708 aa12.84□□□□□ -0.35
C2CD3-204ENST00000414160 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
C2CD3-204ENST00000414160 ZNF692Q9BU19 519 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-204ENST00000414160 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
C2CD3-204ENST00000414160 DZIP1LQ8IYY4 767 aaKnown RBP12.83□□□□□ -0.35
C2CD3-204ENST00000414160 CEP152O94986 1710 aa12.83□□□□□ -0.36
C2CD3-204ENST00000414160 IQSEC2Q5JU85 1478 aa12.83□□□□□ -0.36
C2CD3-204ENST00000414160 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
C2CD3-204ENST00000414160 NSD3Q9BZ95 1437 aa12.83□□□□□ -0.36
C2CD3-204ENST00000414160 KANK1Q14678 1352 aa12.83□□□□□ -0.36
C2CD3-204ENST00000414160 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
C2CD3-204ENST00000414160 HDAC1Q13547 482 aaPredicted RBP12.81□□□□□ -0.36
C2CD3-204ENST00000414160 GRPEL1Q9HAV7 217 aa12.81□□□□□ -0.36
C2CD3-204ENST00000414160 DDIT3P35638 169 aa12.81□□□□□ -0.36
C2CD3-204ENST00000414160 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
C2CD3-204ENST00000414160 AGLP35573 1532 aa12.81□□□□□ -0.36
C2CD3-204ENST00000414160 HSCBQ8IWL3 235 aa12.8□□□□□ -0.36
C2CD3-204ENST00000414160 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
C2CD3-204ENST00000414160 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
C2CD3-204ENST00000414160 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
C2CD3-204ENST00000414160 TRIM27P14373 513 aa12.8□□□□□ -0.36
C2CD3-204ENST00000414160 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
C2CD3-204ENST00000414160 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
C2CD3-204ENST00000414160 TRAK1Q9UPV9 953 aa12.79□□□□□ -0.36
C2CD3-204ENST00000414160 SBNO2Q9Y2G9 1366 aa12.79□□□□□ -0.36
C2CD3-204ENST00000414160 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
C2CD3-204ENST00000414160 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
C2CD3-204ENST00000414160 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
C2CD3-204ENST00000414160 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
C2CD3-204ENST00000414160 KIF3BO15066 747 aa12.78□□□□□ -0.36
C2CD3-204ENST00000414160 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
C2CD3-204ENST00000414160 GAS2L3Q86XJ1 694 aa12.78□□□□□ -0.36
C2CD3-204ENST00000414160 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
C2CD3-204ENST00000414160 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
C2CD3-204ENST00000414160 ESPNB1AK53 854 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms