RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 HIC1Q14526 733 aa8.3□□□□□ -1.08
AC004987.3-201ENST00000413879 PRDM9Q9NQV7 894 aa8.3□□□□□ -1.08
AC004987.3-201ENST00000413879 WNT7AO00755 349 aa8.29□□□□□ -1.08
AC004987.3-201ENST00000413879 SMPD1P17405 629 aa8.29□□□□□ -1.08
AC004987.3-201ENST00000413879 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
AC004987.3-201ENST00000413879 SALL2Q9Y467 1007 aaPredicted RBP8.29□□□□□ -1.08
AC004987.3-201ENST00000413879 SEMA3EO15041 775 aa8.28□□□□□ -1.08
AC004987.3-201ENST00000413879 GCGRP47871 477 aa8.28□□□□□ -1.08
AC004987.3-201ENST00000413879 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
AC004987.3-201ENST00000413879 J3QL48 77 aa8.27□□□□□ -1.09
AC004987.3-201ENST00000413879 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
AC004987.3-201ENST00000413879 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
AC004987.3-201ENST00000413879 TRIM47Q96LD4 638 aa8.27□□□□□ -1.09
AC004987.3-201ENST00000413879 FAM181BA6NEQ2 426 aa8.25□□□□□ -1.09
AC004987.3-201ENST00000413879 TRIM32Q13049 653 aa8.25□□□□□ -1.09
AC004987.3-201ENST00000413879 MSS51Q4VC12 460 aa8.25□□□□□ -1.09
AC004987.3-201ENST00000413879 SLC16A10Q8TF71 515 aa8.25□□□□□ -1.09
AC004987.3-201ENST00000413879 NLRP7Q8WX94 980 aa8.25□□□□□ -1.09
AC004987.3-201ENST00000413879 KIFC2Q96AC6 838 aa8.25□□□□□ -1.09
AC004987.3-201ENST00000413879 GNPATO15228 680 aa8.24□□□□□ -1.09
AC004987.3-201ENST00000413879 RNF19BQ6ZMZ0 732 aa8.24□□□□□ -1.09
AC004987.3-201ENST00000413879 HPS1Q92902 700 aa8.24□□□□□ -1.09
AC004987.3-201ENST00000413879 P3H3Q8IVL6 736 aa8.23□□□□□ -1.09
AC004987.3-201ENST00000413879 Q3C1V9 767 aa8.22□□□□□ -1.09
AC004987.3-201ENST00000413879 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
AC004987.3-201ENST00000413879 SMYD5Q6GMV2 418 aa8.22□□□□□ -1.09
AC004987.3-201ENST00000413879 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
AC004987.3-201ENST00000413879 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
AC004987.3-201ENST00000413879 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
AC004987.3-201ENST00000413879 RC3H1Q5TC82 1133 aaKnown RBP8.19□□□□□ -1.1
AC004987.3-201ENST00000413879 MMP16P51512 607 aa8.18□□□□□ -1.1
AC004987.3-201ENST00000413879 ERICH6Q7L0X2 663 aa8.18□□□□□ -1.1
AC004987.3-201ENST00000413879 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
AC004987.3-201ENST00000413879 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
AC004987.3-201ENST00000413879 ALDH1A1P00352 501 aa8.17□□□□□ -1.1
AC004987.3-201ENST00000413879 GMPRP36959 345 aa8.15□□□□□ -1.1
AC004987.3-201ENST00000413879 ZSCAN1Q8NBB4 408 aa8.15□□□□□ -1.1
AC004987.3-201ENST00000413879 IRF7Q92985 503 aa8.15□□□□□ -1.1
AC004987.3-201ENST00000413879 PHOX2BQ99453 314 aa8.15□□□□□ -1.1
AC004987.3-201ENST00000413879 PRKCSHP14314 528 aaPredicted RBP8.14□□□□□ -1.11
AC004987.3-201ENST00000413879 WNT7BP56706 349 aa8.14□□□□□ -1.11
AC004987.3-201ENST00000413879 DXOO77932 396 aaKnown RBP8.13□□□□□ -1.11
AC004987.3-201ENST00000413879 TESPA1A2RU30 521 aaPredicted RBP8.12□□□□□ -1.11
AC004987.3-201ENST00000413879 KDM4AO75164 1064 aa8.12□□□□□ -1.11
AC004987.3-201ENST00000413879 VEGFBP49765 207 aa8.12□□□□□ -1.11
AC004987.3-201ENST00000413879 SKOR1P84550 965 aa8.12□□□□□ -1.11
AC004987.3-201ENST00000413879 WASF2Q9Y6W5 498 aa8.12□□□□□ -1.11
AC004987.3-201ENST00000413879 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
AC004987.3-201ENST00000413879 ARXQ96QS3 562 aa8.11□□□□□ -1.11
AC004987.3-201ENST00000413879 NPAS3Q8IXF0 933 aa8.1□□□□□ -1.11
AC004987.3-201ENST00000413879 EHBP1Q8NDI1 1231 aa8.1□□□□□ -1.11
AC004987.3-201ENST00000413879 BMP1P13497 986 aa8.09□□□□□ -1.11
AC004987.3-201ENST00000413879 CD46P15529 392 aa8.09□□□□□ -1.11
AC004987.3-201ENST00000413879 GPR37O15354 613 aa8.08□□□□□ -1.12
AC004987.3-201ENST00000413879 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
AC004987.3-201ENST00000413879 TRIM46Q7Z4K8 759 aa8.07□□□□□ -1.12
AC004987.3-201ENST00000413879 USP46P62068 366 aa8.06□□□□□ -1.12
AC004987.3-201ENST00000413879 HLA-CQ95604 372 aa8.06□□□□□ -1.12
AC004987.3-201ENST00000413879 H3BM21 787 aa8.05□□□□□ -1.12
AC004987.3-201ENST00000413879 SIAH2O43255 324 aa8.05□□□□□ -1.12
AC004987.3-201ENST00000413879 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
AC004987.3-201ENST00000413879 JUNDP17535 347 aa8.04□□□□□ -1.12
AC004987.3-201ENST00000413879 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
AC004987.3-201ENST00000413879 ZFP42Q96MM3 310 aa8.04□□□□□ -1.12
AC004987.3-201ENST00000413879 PTCRAQ6ISU1 281 aaPredicted RBP8.03□□□□□ -1.12
AC004987.3-201ENST00000413879 SYMPKQ92797 1274 aaKnown RBP8.03□□□□□ -1.12
AC004987.3-201ENST00000413879 NUDT12Q9BQG2 462 aa8.03□□□□□ -1.12
AC004987.3-201ENST00000413879 ERBB4Q15303 1308 aa8.03□□□□□ -1.12
AC004987.3-201ENST00000413879 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
AC004987.3-201ENST00000413879 HOXA2O43364 376 aa8.01□□□□□ -1.13
AC004987.3-201ENST00000413879 MDM2Q00987 491 aaPredicted RBP8.01□□□□□ -1.13
AC004987.3-201ENST00000413879 GUCA2AQ02747 115 aa8.01□□□□□ -1.13
AC004987.3-201ENST00000413879 KRTAP4-6Q9BYQ5 205 aa8.01□□□□□ -1.13
AC004987.3-201ENST00000413879 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
AC004987.3-201ENST00000413879 SH3BP2P78314 561 aa7.99□□□□□ -1.13
AC004987.3-201ENST00000413879 SCARF1Q14162 830 aa7.99□□□□□ -1.13
AC004987.3-201ENST00000413879 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
AC004987.3-201ENST00000413879 SUZ12Q15022 739 aaKnown RBP7.98□□□□□ -1.13
AC004987.3-201ENST00000413879 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
AC004987.3-201ENST00000413879 C6orf229H3BNL8 230 aa7.97□□□□□ -1.13
AC004987.3-201ENST00000413879 IRF6O14896 467 aa7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 MS4A1P11836 297 aa7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 MAP2K5Q13163 448 aa7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 LINC01559Q495D7 138 aa7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 KRI1Q8N9T8 703 aaKnown RBP7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 BAP1Q92560 729 aa7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 PURBQ96QR8 312 aaKnown RBP7.96□□□□□ -1.14
AC004987.3-201ENST00000413879 NNTQ13423 1086 aa7.95□□□□□ -1.14
AC004987.3-201ENST00000413879 SOBPA7XYQ1 873 aa7.94□□□□□ -1.14
AC004987.3-201ENST00000413879 UNC93B1Q9H1C4 597 aa7.94□□□□□ -1.14
AC004987.3-201ENST00000413879 TLL2Q9Y6L7 1015 aa7.94□□□□□ -1.14
AC004987.3-201ENST00000413879 FDX1P10109 184 aa7.93□□□□□ -1.14
AC004987.3-201ENST00000413879 VARSP26640 1264 aaKnown RBP7.93□□□□□ -1.14
AC004987.3-201ENST00000413879 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
AC004987.3-201ENST00000413879 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
AC004987.3-201ENST00000413879 KCTD17Q8N5Z5 321 aa7.92□□□□□ -1.14
AC004987.3-201ENST00000413879 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
AC004987.3-201ENST00000413879 MAN1A2O60476 641 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms