RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.47
COPS7B-210ENST00000413197 CLTCL1P53675 1640 aa18.02■□□□□ 0.47
COPS7B-210ENST00000413197 CEBPAP49715 358 aaPredicted RBP18.01■□□□□ 0.47
COPS7B-210ENST00000413197 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
COPS7B-210ENST00000413197 ZNF521Q96K83 1311 aa18.01■□□□□ 0.47
COPS7B-210ENST00000413197 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
COPS7B-210ENST00000413197 PLEKHH1Q9ULM0 1364 aa18■□□□□ 0.47
COPS7B-210ENST00000413197 TMF1P82094 1093 aa18■□□□□ 0.47
COPS7B-210ENST00000413197 PLCB2Q00722 1185 aa18■□□□□ 0.47
COPS7B-210ENST00000413197 TRPM2O94759 1503 aa18■□□□□ 0.47
COPS7B-210ENST00000413197 SYNMO15061 1565 aa17.98■□□□□ 0.47
COPS7B-210ENST00000413197 SLC4A3P48751 1232 aa17.98■□□□□ 0.47
COPS7B-210ENST00000413197 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
COPS7B-210ENST00000413197 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
COPS7B-210ENST00000413197 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
COPS7B-210ENST00000413197 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
COPS7B-210ENST00000413197 NOS1P29475 1434 aa17.96■□□□□ 0.47
COPS7B-210ENST00000413197 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
COPS7B-210ENST00000413197 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.94■□□□□ 0.46
COPS7B-210ENST00000413197 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
COPS7B-210ENST00000413197 GOLGA2Q08379 1002 aa17.94■□□□□ 0.46
COPS7B-210ENST00000413197 IDI1Q13907 227 aa17.93■□□□□ 0.46
COPS7B-210ENST00000413197 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
COPS7B-210ENST00000413197 CHGAP10645 457 aaKnown RBP17.93■□□□□ 0.46
COPS7B-210ENST00000413197 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
COPS7B-210ENST00000413197 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
COPS7B-210ENST00000413197 TRMT2AQ8IZ69 625 aaKnown RBP17.92■□□□□ 0.46
COPS7B-210ENST00000413197 MROH2AA6NES4 1674 aa17.92■□□□□ 0.46
COPS7B-210ENST00000413197 ERVK-7P63135 1459 aa17.92■□□□□ 0.46
COPS7B-210ENST00000413197 SLFN5Q08AF3 891 aa17.91■□□□□ 0.46
COPS7B-210ENST00000413197 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
COPS7B-210ENST00000413197 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
COPS7B-210ENST00000413197 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
COPS7B-210ENST00000413197 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
COPS7B-210ENST00000413197 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
COPS7B-210ENST00000413197 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
COPS7B-210ENST00000413197 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
COPS7B-210ENST00000413197 NUTM2DQ5VT03 806 aaPredicted RBP17.9■□□□□ 0.46
COPS7B-210ENST00000413197 KNSTRNQ9Y448 316 aa17.89■□□□□ 0.45
COPS7B-210ENST00000413197 IQGAP1P46940 1657 aa17.88■□□□□ 0.45
COPS7B-210ENST00000413197 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
COPS7B-210ENST00000413197 PIK3C2BO00750 1634 aa17.87■□□□□ 0.45
COPS7B-210ENST00000413197 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
COPS7B-210ENST00000413197 ASXL1Q8IXJ9 1541 aa17.86■□□□□ 0.45
COPS7B-210ENST00000413197 C3P01024 1663 aa17.86■□□□□ 0.45
COPS7B-210ENST00000413197 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
COPS7B-210ENST00000413197 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
COPS7B-210ENST00000413197 SPATA31D1Q6ZQQ2 1576 aa17.85■□□□□ 0.45
COPS7B-210ENST00000413197 RGS3P49796 1198 aa17.85■□□□□ 0.45
COPS7B-210ENST00000413197 RIMS1Q86UR5 1692 aaKnown RBP17.85■□□□□ 0.45
COPS7B-210ENST00000413197 MYO5BQ9ULV0 1848 aa17.85■□□□□ 0.45
COPS7B-210ENST00000413197 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
COPS7B-210ENST00000413197 USP19O94966 1318 aa17.83■□□□□ 0.45
COPS7B-210ENST00000413197 ADGRB3O60242 1522 aa17.83■□□□□ 0.45
COPS7B-210ENST00000413197 KIF1BO60333 1816 aa17.83■□□□□ 0.44
COPS7B-210ENST00000413197 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.44
COPS7B-210ENST00000413197 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
COPS7B-210ENST00000413197 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
COPS7B-210ENST00000413197 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
COPS7B-210ENST00000413197 MYOM1P52179 1685 aa17.81■□□□□ 0.44
COPS7B-210ENST00000413197 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
COPS7B-210ENST00000413197 SLC52A1Q9NWF4 448 aa17.8■□□□□ 0.44
COPS7B-210ENST00000413197 TNRQ92752 1358 aa17.8■□□□□ 0.44
COPS7B-210ENST00000413197 TMEM131LA2VDJ0 1609 aa17.79■□□□□ 0.44
COPS7B-210ENST00000413197 E9PSI1 815 aa17.79■□□□□ 0.44
COPS7B-210ENST00000413197 BCAR3O75815 825 aa17.78■□□□□ 0.44
COPS7B-210ENST00000413197 IGHDP01880 384 aa17.78■□□□□ 0.44
COPS7B-210ENST00000413197 AAMPQ13685 434 aa17.78■□□□□ 0.44
COPS7B-210ENST00000413197 NINLQ9Y2I6 1382 aa17.78■□□□□ 0.44
COPS7B-210ENST00000413197 CGNL1Q0VF96 1302 aa17.77■□□□□ 0.44
COPS7B-210ENST00000413197 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
COPS7B-210ENST00000413197 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.44
COPS7B-210ENST00000413197 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
COPS7B-210ENST00000413197 APAF1O14727 1248 aa17.77■□□□□ 0.43
COPS7B-210ENST00000413197 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.43
COPS7B-210ENST00000413197 MAPK8IP3Q9UPT6 1336 aa17.76■□□□□ 0.43
COPS7B-210ENST00000413197 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
COPS7B-210ENST00000413197 STAC3Q96MF2 364 aa17.76■□□□□ 0.43
COPS7B-210ENST00000413197 A2ML1A8K2U0 1454 aa17.75■□□□□ 0.43
COPS7B-210ENST00000413197 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
COPS7B-210ENST00000413197 IFT172Q9UG01 1749 aa17.75■□□□□ 0.43
COPS7B-210ENST00000413197 NEXMIFQ5QGS0 1516 aa17.74■□□□□ 0.43
COPS7B-210ENST00000413197 KDM4FA0A1W2PPD8 638 aa17.74■□□□□ 0.43
COPS7B-210ENST00000413197 CFAP70Q5T0N1 1121 aa17.73■□□□□ 0.43
COPS7B-210ENST00000413197 PPLO60437 1756 aa17.73■□□□□ 0.43
COPS7B-210ENST00000413197 CLUAP1Q96AJ1 413 aa17.72■□□□□ 0.43
COPS7B-210ENST00000413197 PTPRMP28827 1452 aa17.72■□□□□ 0.43
COPS7B-210ENST00000413197 SEC24BO95487 1268 aa17.72■□□□□ 0.43
COPS7B-210ENST00000413197 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
COPS7B-210ENST00000413197 NEURL4Q96JN8 1562 aa17.71■□□□□ 0.43
COPS7B-210ENST00000413197 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.43
COPS7B-210ENST00000413197 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
COPS7B-210ENST00000413197 BECN1Q14457 450 aa17.71■□□□□ 0.43
COPS7B-210ENST00000413197 UBR1Q8IWV7 1749 aa17.69■□□□□ 0.42
COPS7B-210ENST00000413197 CENPJQ9HC77 1338 aaPredicted RBP17.69■□□□□ 0.42
COPS7B-210ENST00000413197 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
COPS7B-210ENST00000413197 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
COPS7B-210ENST00000413197 POGKQ9P215 609 aa17.69■□□□□ 0.42
COPS7B-210ENST00000413197 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
COPS7B-210ENST00000413197 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms