RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
SCAMP4-202ENST00000409472 PTPRMP28827 1452 aa20.14■□□□□ 0.81
SCAMP4-202ENST00000409472 EXOC6Q8TAG9 804 aa20.13■□□□□ 0.81
SCAMP4-202ENST00000409472 ARHGEF40Q8TER5 1519 aa20.13■□□□□ 0.81
SCAMP4-202ENST00000409472 PLIN1O60240 522 aa20.13■□□□□ 0.81
SCAMP4-202ENST00000409472 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
SCAMP4-202ENST00000409472 ZNF521Q96K83 1311 aa20.13■□□□□ 0.81
SCAMP4-202ENST00000409472 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
SCAMP4-202ENST00000409472 USP32Q8NFA0 1604 aa20.11■□□□□ 0.81
SCAMP4-202ENST00000409472 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
SCAMP4-202ENST00000409472 ALKQ9UM73 1620 aa20.1■□□□□ 0.81
SCAMP4-202ENST00000409472 SPATA31D1Q6ZQQ2 1576 aa20.1■□□□□ 0.81
SCAMP4-202ENST00000409472 YTHDC2Q9H6S0 1430 aaKnown RBP20.09■□□□□ 0.81
SCAMP4-202ENST00000409472 MORC1Q86VD1 984 aa20.08■□□□□ 0.81
SCAMP4-202ENST00000409472 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.8
SCAMP4-202ENST00000409472 A2ML1A8K2U0 1454 aa20.08■□□□□ 0.8
SCAMP4-202ENST00000409472 APAF1O14727 1248 aa20.08■□□□□ 0.8
SCAMP4-202ENST00000409472 PRAM1Q96QH2 718 aa20.08■□□□□ 0.8
SCAMP4-202ENST00000409472 DUSP27Q5VZP5 1158 aa20.07■□□□□ 0.8
SCAMP4-202ENST00000409472 SPINK5Q9NQ38 1064 aaPredicted RBP20.07■□□□□ 0.8
SCAMP4-202ENST00000409472 STAG3Q9UJ98 1225 aa20.07■□□□□ 0.8
SCAMP4-202ENST00000409472 DMRT2Q9Y5R5 561 aa20.06■□□□□ 0.8
SCAMP4-202ENST00000409472 ANKRD36BQ8N2N9 1353 aa20.06■□□□□ 0.8
SCAMP4-202ENST00000409472 POLR3AO14802 1390 aaPredicted RBP20.06■□□□□ 0.8
SCAMP4-202ENST00000409472 A0A1W2PP64 1363 aa20.05■□□□□ 0.8
SCAMP4-202ENST00000409472 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
SCAMP4-202ENST00000409472 SRPK2P78362 688 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-202ENST00000409472 C20orf194Q5TEA3 1177 aa20.03■□□□□ 0.8
SCAMP4-202ENST00000409472 CGNL1Q0VF96 1302 aa20.03■□□□□ 0.8
SCAMP4-202ENST00000409472 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
SCAMP4-202ENST00000409472 GOLGA2Q08379 1002 aa20.02■□□□□ 0.8
SCAMP4-202ENST00000409472 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.79
SCAMP4-202ENST00000409472 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
SCAMP4-202ENST00000409472 NRXN3Q9Y4C0 1643 aa20■□□□□ 0.79
SCAMP4-202ENST00000409472 MSH5O43196 834 aa20■□□□□ 0.79
SCAMP4-202ENST00000409472 POGKQ9P215 609 aa20■□□□□ 0.79
SCAMP4-202ENST00000409472 MTHFSP49914 203 aa20■□□□□ 0.79
SCAMP4-202ENST00000409472 SLFN5Q08AF3 891 aa20■□□□□ 0.79
SCAMP4-202ENST00000409472 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
SCAMP4-202ENST00000409472 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
SCAMP4-202ENST00000409472 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
SCAMP4-202ENST00000409472 ABCC11Q96J66 1382 aa19.98■□□□□ 0.79
SCAMP4-202ENST00000409472 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
SCAMP4-202ENST00000409472 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
SCAMP4-202ENST00000409472 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
SCAMP4-202ENST00000409472 ZMYM3Q14202 1370 aa19.96■□□□□ 0.79
SCAMP4-202ENST00000409472 TRMT2AQ8IZ69 625 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-202ENST00000409472 IQSEC2Q5JU85 1478 aa19.96■□□□□ 0.79
SCAMP4-202ENST00000409472 NLRP1Q9C000 1473 aa19.94■□□□□ 0.78
SCAMP4-202ENST00000409472 NEUROD2Q15784 382 aa19.94■□□□□ 0.78
SCAMP4-202ENST00000409472 CDK19Q9BWU1 502 aa19.94■□□□□ 0.78
SCAMP4-202ENST00000409472 NSD2O96028 1365 aa19.93■□□□□ 0.78
SCAMP4-202ENST00000409472 ATAD2Q6PL18 1390 aa19.93■□□□□ 0.78
SCAMP4-202ENST00000409472 METP08581 1390 aa19.92■□□□□ 0.78
SCAMP4-202ENST00000409472 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
SCAMP4-202ENST00000409472 SKAP1Q86WV1 359 aa19.92■□□□□ 0.78
SCAMP4-202ENST00000409472 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
SCAMP4-202ENST00000409472 NINLQ9Y2I6 1382 aa19.91■□□□□ 0.78
SCAMP4-202ENST00000409472 WWC1Q8IX03 1113 aa19.91■□□□□ 0.78
SCAMP4-202ENST00000409472 DLC1Q96QB1 1528 aa19.91■□□□□ 0.78
SCAMP4-202ENST00000409472 CABP1Q9NZU7 370 aa19.9■□□□□ 0.78
SCAMP4-202ENST00000409472 FYB1O15117 783 aa19.9■□□□□ 0.78
SCAMP4-202ENST00000409472 DEKP35659 375 aaKnown RBP19.89■□□□□ 0.77
SCAMP4-202ENST00000409472 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
SCAMP4-202ENST00000409472 BCAR3O75815 825 aa19.88■□□□□ 0.77
SCAMP4-202ENST00000409472 ESF1Q9H501 851 aaKnown RBP19.88■□□□□ 0.77
SCAMP4-202ENST00000409472 COL3A1P02461 1466 aaPredicted RBP19.88■□□□□ 0.77
SCAMP4-202ENST00000409472 RUNDC1Q96C34 613 aa19.88■□□□□ 0.77
SCAMP4-202ENST00000409472 KIF20BQ96Q89 1820 aa19.88■□□□□ 0.77
SCAMP4-202ENST00000409472 E9PSI1 815 aa19.87■□□□□ 0.77
SCAMP4-202ENST00000409472 UBR1Q8IWV7 1749 aa19.87■□□□□ 0.77
SCAMP4-202ENST00000409472 TNRQ92752 1358 aa19.87■□□□□ 0.77
SCAMP4-202ENST00000409472 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
SCAMP4-202ENST00000409472 CFAP53Q96M91 514 aa19.86■□□□□ 0.77
SCAMP4-202ENST00000409472 U2AF1L5P0DN76 240 aaPredicted RBP19.85■□□□□ 0.77
SCAMP4-202ENST00000409472 FBLN1P23142 703 aa19.85■□□□□ 0.77
SCAMP4-202ENST00000409472 U2AF1Q01081 240 aaKnown RBP eCLIP19.85■□□□□ 0.77
SCAMP4-202ENST00000409472 TXNDC2Q86VQ3 553 aa19.85■□□□□ 0.77
SCAMP4-202ENST00000409472 NCKAP5LQ9HCH0 1330 aa19.84■□□□□ 0.77
SCAMP4-202ENST00000409472 ADGRB2O60241 1585 aa19.83■□□□□ 0.77
SCAMP4-202ENST00000409472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.77
SCAMP4-202ENST00000409472 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
SCAMP4-202ENST00000409472 CEBPAP49715 358 aaPredicted RBP19.82■□□□□ 0.76
SCAMP4-202ENST00000409472 MED14O60244 1454 aa19.82■□□□□ 0.76
SCAMP4-202ENST00000409472 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-202ENST00000409472 U2SURPO15042 1029 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-202ENST00000409472 KNDC1Q76NI1 1749 aa19.8■□□□□ 0.76
SCAMP4-202ENST00000409472 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-202ENST00000409472 TMEM2Q9UHN6 1383 aa19.8■□□□□ 0.76
SCAMP4-202ENST00000409472 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
SCAMP4-202ENST00000409472 ATP7BP35670 1465 aa19.79■□□□□ 0.76
SCAMP4-202ENST00000409472 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
SCAMP4-202ENST00000409472 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
SCAMP4-202ENST00000409472 PPIP5K1Q6PFW1 1433 aa19.78■□□□□ 0.76
SCAMP4-202ENST00000409472 KDM2BQ8NHM5 1336 aa19.77■□□□□ 0.76
SCAMP4-202ENST00000409472 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
SCAMP4-202ENST00000409472 CPS1P31327 1500 aa19.77■□□□□ 0.76
SCAMP4-202ENST00000409472 ADAMTS13Q76LX8 1427 aa19.77■□□□□ 0.75
SCAMP4-202ENST00000409472 PLEKHF1Q96S99 279 aa19.76■□□□□ 0.75
SCAMP4-202ENST00000409472 ZRANB1Q9UGI0 708 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms