RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 NUTM2BA6NNL0 878 aaPredicted RBP33.23■■■□□ 2.91
KDELR3-202ENST00000409006 NUTM2EB1AL46 878 aaPredicted RBP33.23■■■□□ 2.91
KDELR3-202ENST00000409006 MEX3CQ5U5Q3 659 aaKnown RBP33.23■■■□□ 2.91
KDELR3-202ENST00000409006 NUTM2AQ8IVF1 878 aaPredicted RBP33.23■■■□□ 2.91
KDELR3-202ENST00000409006 LRRC59Q96AG4 307 aaKnown RBP33.23■■■□□ 2.91
KDELR3-202ENST00000409006 MYOM2P54296 1465 aa33.22■■■□□ 2.91
KDELR3-202ENST00000409006 YTHDC2Q9H6S0 1430 aaKnown RBP33.21■■■□□ 2.91
KDELR3-202ENST00000409006 C14orf93Q9H972 538 aaKnown RBP33.21■■■□□ 2.91
KDELR3-202ENST00000409006 PNPLA6Q8IY17 1366 aa33.19■■■□□ 2.9
KDELR3-202ENST00000409006 CFAP70Q5T0N1 1121 aa33.18■■■□□ 2.9
KDELR3-202ENST00000409006 SOS2Q07890 1332 aaPredicted RBP33.15■■■□□ 2.9
KDELR3-202ENST00000409006 HRCP23327 699 aa33.14■■■□□ 2.9
KDELR3-202ENST00000409006 FMN2Q9NZ56 1722 aa33.13■■■□□ 2.89
KDELR3-202ENST00000409006 NUTM2FA1L443 756 aa33.12■■■□□ 2.89
KDELR3-202ENST00000409006 ESCO1Q5FWF5 840 aa33.11■■■□□ 2.89
KDELR3-202ENST00000409006 ZNF772Q68DY9 489 aaPredicted RBP33.1■■■□□ 2.89
KDELR3-202ENST00000409006 RGPD8O14715 1765 aaPredicted RBP33.1■■■□□ 2.89
KDELR3-202ENST00000409006 DHX57Q6P158 1386 aaKnown RBP33.08■■■□□ 2.89
KDELR3-202ENST00000409006 SIRT1Q96EB6 747 aa33.07■■■□□ 2.88
KDELR3-202ENST00000409006 AFF2P51816 1311 aa33.05■■■□□ 2.88
KDELR3-202ENST00000409006 KDM2AQ9Y2K7 1162 aa33.04■■■□□ 2.88
KDELR3-202ENST00000409006 PXDNQ92626 1479 aa33.04■■■□□ 2.88
KDELR3-202ENST00000409006 ADGRB1O14514 1584 aa33.04■■■□□ 2.88
KDELR3-202ENST00000409006 COL22A1Q8NFW1 1626 aaPredicted RBP33.02■■■□□ 2.88
KDELR3-202ENST00000409006 FOXO3O43524 673 aa33.02■■■□□ 2.88
KDELR3-202ENST00000409006 XPCQ01831 940 aaPredicted RBP33.02■■■□□ 2.88
KDELR3-202ENST00000409006 DCAF11Q8TEB1 546 aa33.02■■■□□ 2.88
KDELR3-202ENST00000409006 C8orf37Q96NL8 207 aa33.02■■■□□ 2.88
KDELR3-202ENST00000409006 NPHP3Q7Z494 1330 aa33.01■■■□□ 2.87
KDELR3-202ENST00000409006 PRAM1Q96QH2 718 aa33■■■□□ 2.87
KDELR3-202ENST00000409006 ADAMTS2O95450 1211 aa32.99■■■□□ 2.87
KDELR3-202ENST00000409006 SAFB2Q14151 953 aaKnown RBP eCLIP32.99■■■□□ 2.87
KDELR3-202ENST00000409006 DLC1Q96QB1 1528 aa32.98■■■□□ 2.87
KDELR3-202ENST00000409006 KIF1AQ12756 1690 aa32.97■■■□□ 2.87
KDELR3-202ENST00000409006 RXRBP28702 533 aa32.93■■■□□ 2.86
KDELR3-202ENST00000409006 TRAK1Q9UPV9 953 aa32.92■■■□□ 2.86
KDELR3-202ENST00000409006 USP32Q8NFA0 1604 aa32.91■■■□□ 2.86
KDELR3-202ENST00000409006 MARF1Q9Y4F3 1742 aaKnown RBP32.91■■■□□ 2.86
KDELR3-202ENST00000409006 NGLY1Q96IV0 654 aa32.91■■■□□ 2.86
KDELR3-202ENST00000409006 POGKQ9P215 609 aa32.91■■■□□ 2.86
KDELR3-202ENST00000409006 ADGRB2O60241 1585 aa32.88■■■□□ 2.85
KDELR3-202ENST00000409006 QTRT2Q9H974 415 aaKnown RBP32.88■■■□□ 2.85
KDELR3-202ENST00000409006 STAC3Q96MF2 364 aa32.86■■■□□ 2.85
KDELR3-202ENST00000409006 PHF8Q9UPP1 1060 aa32.85■■■□□ 2.85
KDELR3-202ENST00000409006 CDK12Q9NYV4 1490 aaPredicted RBP32.85■■■□□ 2.85
KDELR3-202ENST00000409006 KRT28Q7Z3Y7 464 aa32.84■■■□□ 2.85
KDELR3-202ENST00000409006 HIRIP3Q9BW71 556 aaPredicted RBP32.84■■■□□ 2.85
KDELR3-202ENST00000409006 ARHGEF28Q8N1W1 1705 aaKnown RBP32.84■■■□□ 2.85
KDELR3-202ENST00000409006 SPATA31A3Q5VYP0 1347 aa32.83■■■□□ 2.85
KDELR3-202ENST00000409006 MINK1Q8N4C8 1332 aaPredicted RBP32.81■■■□□ 2.84
KDELR3-202ENST00000409006 RBM6P78332 1123 aaKnown RBP32.8■■■□□ 2.84
KDELR3-202ENST00000409006 FNBP4Q8N3X1 1017 aaPredicted RBP32.8■■■□□ 2.84
KDELR3-202ENST00000409006 USP21Q9UK80 565 aa32.8■■■□□ 2.84
KDELR3-202ENST00000409006 RGS12O14924 1447 aa32.78■■■□□ 2.84
KDELR3-202ENST00000409006 ANKARQ7Z5J8 1434 aa32.77■■■□□ 2.84
KDELR3-202ENST00000409006 PMFBP1Q8TBY8 1022 aa32.77■■■□□ 2.84
KDELR3-202ENST00000409006 KIAA1210Q9ULL0 1709 aa32.76■■■□□ 2.83
KDELR3-202ENST00000409006 PRR36Q9H6K5 1346 aa32.75■■■□□ 2.83
KDELR3-202ENST00000409006 UPF1Q92900 1129 aaKnown RBP eCLIP32.74■■■□□ 2.83
KDELR3-202ENST00000409006 TNS3Q68CZ2 1445 aa32.74■■■□□ 2.83
KDELR3-202ENST00000409006 BCL9LQ86UU0 1499 aa32.73■■■□□ 2.83
KDELR3-202ENST00000409006 TULP4Q9NRJ4 1543 aa32.72■■■□□ 2.83
KDELR3-202ENST00000409006 ATRNO75882 1429 aa32.71■■■□□ 2.83
KDELR3-202ENST00000409006 WASLO00401 505 aaPredicted RBP32.71■■■□□ 2.83
KDELR3-202ENST00000409006 PSME1Q06323 249 aa32.71■■■□□ 2.83
KDELR3-202ENST00000409006 TRPC5Q9UL62 973 aaPredicted RBP32.71■■■□□ 2.83
KDELR3-202ENST00000409006 ABCA3Q99758 1704 aa32.71■■■□□ 2.83
KDELR3-202ENST00000409006 TRPM3Q9HCF6 1732 aaPredicted RBP32.71■■■□□ 2.83
KDELR3-202ENST00000409006 SBNO1A3KN83 1393 aa32.7■■■□□ 2.82
KDELR3-202ENST00000409006 CABLES1Q8TDN4 633 aa32.68■■■□□ 2.82
KDELR3-202ENST00000409006 PLEKHG5O94827 1062 aa32.67■■■□□ 2.82
KDELR3-202ENST00000409006 NBPF1Q3BBV0 1214 aa32.67■■■□□ 2.82
KDELR3-202ENST00000409006 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.66■■■□□ 2.82
KDELR3-202ENST00000409006 EIF3AQ14152 1382 aaKnown RBP32.64■■■□□ 2.82
KDELR3-202ENST00000409006 LMOD2Q6P5Q4 547 aa32.64■■■□□ 2.82
KDELR3-202ENST00000409006 ALS2Q96Q42 1657 aa32.63■■■□□ 2.81
KDELR3-202ENST00000409006 ITSN1Q15811 1721 aa32.63■■■□□ 2.81
KDELR3-202ENST00000409006 SLIT2O94813 1529 aa32.62■■■□□ 2.81
KDELR3-202ENST00000409006 SIN3AQ96ST3 1273 aa32.61■■■□□ 2.81
KDELR3-202ENST00000409006 ATP7BP35670 1465 aa32.61■■■□□ 2.81
KDELR3-202ENST00000409006 PLCH1Q4KWH8 1693 aa32.59■■■□□ 2.81
KDELR3-202ENST00000409006 ARHGEF10O15013 1369 aa32.59■■■□□ 2.81
KDELR3-202ENST00000409006 HAP1P54257 671 aaPredicted RBP32.57■■■□□ 2.8
KDELR3-202ENST00000409006 L3MBTL2Q969R5 705 aa32.57■■■□□ 2.8
KDELR3-202ENST00000409006 NUDT16Q96DE0 195 aaKnown RBP32.57■■■□□ 2.8
KDELR3-202ENST00000409006 UNC5CLQ8IV45 518 aa32.56■■■□□ 2.8
KDELR3-202ENST00000409006 CDK19Q9BWU1 502 aa32.56■■■□□ 2.8
KDELR3-202ENST00000409006 GPRASP1Q5JY77 1395 aa32.56■■■□□ 2.8
KDELR3-202ENST00000409006 GLI3P10071 1580 aa32.55■■■□□ 2.8
KDELR3-202ENST00000409006 GJD4Q96KN9 370 aaPredicted RBP32.55■■■□□ 2.8
KDELR3-202ENST00000409006 TOPAZ1Q8N9V7 1692 aa32.55■■■□□ 2.8
KDELR3-202ENST00000409006 NGDNQ8NEJ9 315 aaKnown RBP32.54■■■□□ 2.8
KDELR3-202ENST00000409006 NWD2Q9ULI1 1742 aa32.54■■■□□ 2.8
KDELR3-202ENST00000409006 CRYBG1Q9Y4K1 1723 aa32.54■■■□□ 2.8
KDELR3-202ENST00000409006 RALGAPBQ86X10 1494 aa32.5■■■□□ 2.79
KDELR3-202ENST00000409006 NEUROD1Q13562 356 aa32.49■■■□□ 2.79
KDELR3-202ENST00000409006 TRPM1Q7Z4N2 1603 aa32.48■■■□□ 2.79
KDELR3-202ENST00000409006 QRICH2Q9H0J4 1663 aa32.48■■■□□ 2.79
KDELR3-202ENST00000409006 FAM83GA6ND36 823 aa32.48■■■□□ 2.79
KDELR3-202ENST00000409006 BRWD3Q6RI45 1802 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms