RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 RIMBP3Q9UFD9 1639 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 PTPRMP28827 1452 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 NSD2O96028 1365 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 PDE4AP27815 886 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 NLRP1Q9C000 1473 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 GOLGA2Q08379 1002 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 C20orf194Q5TEA3 1177 aa5.09□□□□□ -1.59
RTN4-209ENST00000405240 CD163L1Q9NR16 1453 aa5.09□□□□□ -1.59
RTN4-209ENST00000405240 KNDC1Q76NI1 1749 aa5.09□□□□□ -1.59
RTN4-209ENST00000405240 ZMYM3Q14202 1370 aa5.09□□□□□ -1.59
RTN4-209ENST00000405240 AGLP35573 1532 aa5.09□□□□□ -1.59
RTN4-209ENST00000405240 DLC1Q96QB1 1528 aa5.09□□□□□ -1.59
RTN4-209ENST00000405240 SPINK5Q9NQ38 1064 aaPredicted RBP5.09□□□□□ -1.6
RTN4-209ENST00000405240 CENPJQ9HC77 1338 aaPredicted RBP5.09□□□□□ -1.6
RTN4-209ENST00000405240 PLIN1O60240 522 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 CNGB1Q14028 1251 aaPredicted RBP5.08□□□□□ -1.6
RTN4-209ENST00000405240 CCDC27Q2M243 656 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 CENPQQ7L2Z9 268 aaPredicted RBP5.08□□□□□ -1.6
RTN4-209ENST00000405240 NSD3Q9BZ95 1437 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 ANKRD36BQ8N2N9 1353 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 SENP3-EIF4A1A0A087X0R7 540 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 E9PSI1 815 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 WDR43Q15061 677 aaKnown RBP eCLIP5.08□□□□□ -1.6
RTN4-209ENST00000405240 NRXN3Q9Y4C0 1643 aa5.08□□□□□ -1.6
RTN4-209ENST00000405240 SPATA31D1Q6ZQQ2 1576 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 ALKQ9UM73 1620 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 ANP32AP39687 249 aaKnown RBP5.07□□□□□ -1.6
RTN4-209ENST00000405240 AKAP12Q02952 1782 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 ABCC11Q96J66 1382 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 DIP2BQ9P265 1576 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 PDE3AQ14432 1141 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 C8orf34Q49A92 452 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 DMRT2Q9Y5R5 561 aa5.07□□□□□ -1.6
RTN4-209ENST00000405240 MON2Q7Z3U7 1717 aa5.06□□□□□ -1.6
RTN4-209ENST00000405240 AAMPQ13685 434 aa5.06□□□□□ -1.6
RTN4-209ENST00000405240 ARHGEF40Q8TER5 1519 aa5.06□□□□□ -1.6
RTN4-209ENST00000405240 WWC1Q8IX03 1113 aa5.06□□□□□ -1.6
RTN4-209ENST00000405240 PNPLA6Q8IY17 1366 aa5.06□□□□□ -1.6
RTN4-209ENST00000405240 WDR63Q8IWG1 891 aa5.06□□□□□ -1.6
RTN4-209ENST00000405240 SALL2Q9Y467 1007 aaPredicted RBP5.06□□□□□ -1.6
RTN4-209ENST00000405240 APAF1O14727 1248 aa5.05□□□□□ -1.6
RTN4-209ENST00000405240 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.05□□□□□ -1.6
RTN4-209ENST00000405240 RUNDC1Q96C34 613 aa5.05□□□□□ -1.6
RTN4-209ENST00000405240 ZBTB47Q9UFB7 747 aaPredicted RBP5.05□□□□□ -1.6
RTN4-209ENST00000405240 ERICH6Q7L0X2 663 aa5.05□□□□□ -1.6
RTN4-209ENST00000405240 MAP2P11137 1827 aaKnown RBP5.05□□□□□ -1.6
RTN4-209ENST00000405240 YEATS2Q9ULM3 1422 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 OSCARQ8IYS5 282 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 BCL11AQ9H165 835 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 USP35Q9P2H5 1018 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 C3P01024 1663 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 TOPAZ1Q8N9V7 1692 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 PLEKHF1Q96S99 279 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 CGNL1Q0VF96 1302 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 DLG5Q8TDM6 1919 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 NRKQ7Z2Y5 1582 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 CCDC146Q8IYE0 955 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 SLC52A1Q9NWF4 448 aa5.04□□□□□ -1.6
RTN4-209ENST00000405240 VGFO15240 615 aaPredicted RBP5.03□□□□□ -1.6
RTN4-209ENST00000405240 BCAR3O75815 825 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 FAM161AQ3B820 660 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 USP19O94966 1318 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 EVC2Q86UK5 1308 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 YTHDC2Q9H6S0 1430 aaKnown RBP5.03□□□□□ -1.6
RTN4-209ENST00000405240 NALCNQ8IZF0 1738 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 A0A1W2PP64 1363 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 PPIP5K1Q6PFW1 1433 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 ATP7BP35670 1465 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 KIF13AQ9H1H9 1805 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 IGHDP01880 384 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 DEKP35659 375 aaKnown RBP5.03□□□□□ -1.6
RTN4-209ENST00000405240 RARSP54136 660 aaKnown RBP5.03□□□□□ -1.6
RTN4-209ENST00000405240 DDRGK1Q96HY6 314 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 CPS1P31327 1500 aa5.03□□□□□ -1.6
RTN4-209ENST00000405240 CT47B1P0C2W7 299 aaPredicted RBP5.02□□□□□ -1.61
RTN4-209ENST00000405240 ITSN1Q15811 1721 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 A2ML1A8K2U0 1454 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 SKAP1Q86WV1 359 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 PPP6R1Q9UPN7 881 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 TRAK1Q9UPV9 953 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 RGPD1P0DJD0 1748 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 RIMS1Q86UR5 1692 aaKnown RBP5.02□□□□□ -1.61
RTN4-209ENST00000405240 ATAD2Q6PL18 1390 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 IL16Q14005 1332 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 IDI1Q13907 227 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 MORC1Q86VD1 984 aa5.02□□□□□ -1.61
RTN4-209ENST00000405240 LRRC7Q96NW7 1537 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 UBR1Q8IWV7 1749 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 TMEM132EQ6IEE7 984 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 TCP11L2Q8N4U5 519 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 TECPR2O15040 1411 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 CPSF1Q10570 1443 aaKnown RBP5.01□□□□□ -1.61
RTN4-209ENST00000405240 USP54Q70EL1 1684 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 NPM1P06748 294 aaKnown RBP eCLIP5.01□□□□□ -1.61
RTN4-209ENST00000405240 MTHFSP49914 203 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 CLUAP1Q96AJ1 413 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 BRPF1P55201 1214 aaPredicted RBP5.01□□□□□ -1.61
RTN4-209ENST00000405240 FAM135BQ49AJ0 1406 aa5.01□□□□□ -1.61
RTN4-209ENST00000405240 PPM1GO15355 546 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms