RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 KIF1BO60333 1816 aa18.28■□□□□ 0.52
SPTLC1P3-201ENST00000403408 XPCQ01831 940 aaPredicted RBP18.26■□□□□ 0.51
SPTLC1P3-201ENST00000403408 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
SPTLC1P3-201ENST00000403408 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
SPTLC1P3-201ENST00000403408 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
SPTLC1P3-201ENST00000403408 GLI3P10071 1580 aa18.22■□□□□ 0.51
SPTLC1P3-201ENST00000403408 GJD4Q96KN9 370 aaPredicted RBP18.22■□□□□ 0.51
SPTLC1P3-201ENST00000403408 HFM1A2PYH4 1435 aa18.22■□□□□ 0.51
SPTLC1P3-201ENST00000403408 MSH5O43196 834 aa18.21■□□□□ 0.51
SPTLC1P3-201ENST00000403408 FOXO3O43524 673 aa18.21■□□□□ 0.51
SPTLC1P3-201ENST00000403408 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
SPTLC1P3-201ENST00000403408 PPLO60437 1756 aa18.21■□□□□ 0.51
SPTLC1P3-201ENST00000403408 BRWD3Q6RI45 1802 aa18.21■□□□□ 0.51
SPTLC1P3-201ENST00000403408 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
SPTLC1P3-201ENST00000403408 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
SPTLC1P3-201ENST00000403408 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
SPTLC1P3-201ENST00000403408 NAIPQ13075 1403 aa18.2■□□□□ 0.5
SPTLC1P3-201ENST00000403408 RALGAPBQ86X10 1494 aa18.19■□□□□ 0.5
SPTLC1P3-201ENST00000403408 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
SPTLC1P3-201ENST00000403408 SLIT2O94813 1529 aa18.18■□□□□ 0.5
SPTLC1P3-201ENST00000403408 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.18■□□□□ 0.5
SPTLC1P3-201ENST00000403408 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
SPTLC1P3-201ENST00000403408 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
SPTLC1P3-201ENST00000403408 DEFB132Q7Z7B7 95 aa18.18■□□□□ 0.5
SPTLC1P3-201ENST00000403408 CCDC125Q86Z20 511 aa18.17■□□□□ 0.5
SPTLC1P3-201ENST00000403408 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
SPTLC1P3-201ENST00000403408 ADGRF5Q8IZF2 1346 aa18.16■□□□□ 0.5
SPTLC1P3-201ENST00000403408 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
SPTLC1P3-201ENST00000403408 UNC5CLQ8IV45 518 aa18.14■□□□□ 0.49
SPTLC1P3-201ENST00000403408 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.49
SPTLC1P3-201ENST00000403408 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
SPTLC1P3-201ENST00000403408 STK26Q9P289 416 aa18.12■□□□□ 0.49
SPTLC1P3-201ENST00000403408 TECPR2O15040 1411 aa18.12■□□□□ 0.49
SPTLC1P3-201ENST00000403408 FMN2Q9NZ56 1722 aa18.1■□□□□ 0.49
SPTLC1P3-201ENST00000403408 USP32Q8NFA0 1604 aa18.1■□□□□ 0.49
SPTLC1P3-201ENST00000403408 TMEM132EQ6IEE7 984 aa18.1■□□□□ 0.49
SPTLC1P3-201ENST00000403408 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
SPTLC1P3-201ENST00000403408 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
SPTLC1P3-201ENST00000403408 CABLES1Q8TDN4 633 aa18.09■□□□□ 0.49
SPTLC1P3-201ENST00000403408 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
SPTLC1P3-201ENST00000403408 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
SPTLC1P3-201ENST00000403408 ABCC11Q96J66 1382 aa18.07■□□□□ 0.48
SPTLC1P3-201ENST00000403408 ONECUT3O60422 494 aaPredicted RBP18.07■□□□□ 0.48
SPTLC1P3-201ENST00000403408 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
SPTLC1P3-201ENST00000403408 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
SPTLC1P3-201ENST00000403408 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
SPTLC1P3-201ENST00000403408 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
SPTLC1P3-201ENST00000403408 IFT172Q9UG01 1749 aa18.06■□□□□ 0.48
SPTLC1P3-201ENST00000403408 LRP5O75197 1615 aa18.05■□□□□ 0.48
SPTLC1P3-201ENST00000403408 VPS72Q15906 364 aa18.05■□□□□ 0.48
SPTLC1P3-201ENST00000403408 PLCH1Q4KWH8 1693 aa18.05■□□□□ 0.48
SPTLC1P3-201ENST00000403408 ABCA3Q99758 1704 aa18.04■□□□□ 0.48
SPTLC1P3-201ENST00000403408 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
SPTLC1P3-201ENST00000403408 PLEKHG5O94827 1062 aa18.03■□□□□ 0.48
SPTLC1P3-201ENST00000403408 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
SPTLC1P3-201ENST00000403408 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
SPTLC1P3-201ENST00000403408 PSDA5PKW4 1024 aaPredicted RBP18.02■□□□□ 0.48
SPTLC1P3-201ENST00000403408 TNS3Q68CZ2 1445 aa18.02■□□□□ 0.48
SPTLC1P3-201ENST00000403408 NWD2Q9ULI1 1742 aa18.01■□□□□ 0.47
SPTLC1P3-201ENST00000403408 PIK3C2GO75747 1445 aa18.01■□□□□ 0.47
SPTLC1P3-201ENST00000403408 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
SPTLC1P3-201ENST00000403408 FAM83GA6ND36 823 aa18.01■□□□□ 0.47
SPTLC1P3-201ENST00000403408 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
SPTLC1P3-201ENST00000403408 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
SPTLC1P3-201ENST00000403408 HRCP23327 699 aa17.99■□□□□ 0.47
SPTLC1P3-201ENST00000403408 PHF8Q9UPP1 1060 aa17.99■□□□□ 0.47
SPTLC1P3-201ENST00000403408 NRAPQ86VF7 1730 aa17.98■□□□□ 0.47
SPTLC1P3-201ENST00000403408 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
SPTLC1P3-201ENST00000403408 SBNO1A3KN83 1393 aa17.96■□□□□ 0.47
SPTLC1P3-201ENST00000403408 ANKRD30BQ9BXX2 1392 aa17.96■□□□□ 0.47
SPTLC1P3-201ENST00000403408 FAM182BQ5T319 152 aa17.96■□□□□ 0.47
SPTLC1P3-201ENST00000403408 SF3B2Q13435 895 aaKnown RBP17.95■□□□□ 0.46
SPTLC1P3-201ENST00000403408 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
SPTLC1P3-201ENST00000403408 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
SPTLC1P3-201ENST00000403408 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
SPTLC1P3-201ENST00000403408 TRPM3Q9HCF6 1732 aaPredicted RBP17.94■□□□□ 0.46
SPTLC1P3-201ENST00000403408 HAP1P54257 671 aaPredicted RBP17.93■□□□□ 0.46
SPTLC1P3-201ENST00000403408 EN1Q05925 392 aaPredicted RBP17.93■□□□□ 0.46
SPTLC1P3-201ENST00000403408 CFAP70Q5T0N1 1121 aa17.93■□□□□ 0.46
SPTLC1P3-201ENST00000403408 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
SPTLC1P3-201ENST00000403408 C14orf93Q9H972 538 aaKnown RBP17.93■□□□□ 0.46
SPTLC1P3-201ENST00000403408 PSME1Q06323 249 aa17.92■□□□□ 0.46
SPTLC1P3-201ENST00000403408 SAFB2Q14151 953 aaKnown RBP eCLIP17.92■□□□□ 0.46
SPTLC1P3-201ENST00000403408 LMOD2Q6P5Q4 547 aa17.92■□□□□ 0.46
SPTLC1P3-201ENST00000403408 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
SPTLC1P3-201ENST00000403408 BTG4Q9NY30 223 aa17.91■□□□□ 0.46
SPTLC1P3-201ENST00000403408 BAG6P46379 1132 aa17.9■□□□□ 0.46
SPTLC1P3-201ENST00000403408 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
SPTLC1P3-201ENST00000403408 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
SPTLC1P3-201ENST00000403408 ALS2Q96Q42 1657 aa17.9■□□□□ 0.46
SPTLC1P3-201ENST00000403408 TNS1Q9HBL0 1735 aaKnown RBP17.89■□□□□ 0.46
SPTLC1P3-201ENST00000403408 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
SPTLC1P3-201ENST00000403408 THSD7AQ9UPZ6 1657 aa17.88■□□□□ 0.45
SPTLC1P3-201ENST00000403408 CRYBG1Q9Y4K1 1723 aa17.88■□□□□ 0.45
SPTLC1P3-201ENST00000403408 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
SPTLC1P3-201ENST00000403408 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
SPTLC1P3-201ENST00000403408 A0A0G2JS52 829 aa17.87■□□□□ 0.45
SPTLC1P3-201ENST00000403408 MYT1Q01538 1121 aa17.87■□□□□ 0.45
SPTLC1P3-201ENST00000403408 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
SPTLC1P3-201ENST00000403408 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms