RNA–Protein interactions for RNA: ENST00000402280.5

NLRC4-203, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-203ENST00000402280 FER1L4A9Z1Z3 1794 aa6.58□□□□□ -1.36
NLRC4-203ENST00000402280 E9PCH4 1651 aa6.58□□□□□ -1.36
NLRC4-203ENST00000402280 PRKRIP1Q9H875 184 aaPredicted RBP6.58□□□□□ -1.36
NLRC4-203ENST00000402280 ZNF644Q9H582 1327 aaPredicted RBP6.58□□□□□ -1.36
NLRC4-203ENST00000402280 SPHKAPQ2M3C7 1700 aa6.58□□□□□ -1.36
NLRC4-203ENST00000402280 OFD1O75665 1012 aa6.58□□□□□ -1.36
NLRC4-203ENST00000402280 ZSCAN20P17040 1043 aaPredicted RBP6.58□□□□□ -1.36
NLRC4-203ENST00000402280 ATP1B4Q9UN42 357 aaPredicted RBP6.58□□□□□ -1.36
NLRC4-203ENST00000402280 ZNF142P52746 1687 aaPredicted RBP6.57□□□□□ -1.36
NLRC4-203ENST00000402280 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.57□□□□□ -1.36
NLRC4-203ENST00000402280 EFCAB6Q5THR3 1501 aa6.57□□□□□ -1.36
NLRC4-203ENST00000402280 PATL2C9JE40 543 aaKnown RBP6.57□□□□□ -1.36
NLRC4-203ENST00000402280 PIAS4Q8N2W9 510 aaPredicted RBP6.57□□□□□ -1.36
NLRC4-203ENST00000402280 ARID3AQ99856 593 aa6.57□□□□□ -1.36
NLRC4-203ENST00000402280 GTPBP4Q9BZE4 634 aaKnown RBP6.57□□□□□ -1.36
NLRC4-203ENST00000402280 CFDP1Q9UEE9 299 aaPredicted RBP6.57□□□□□ -1.36
NLRC4-203ENST00000402280 ARHGAP31Q2M1Z3 1444 aa6.56□□□□□ -1.36
NLRC4-203ENST00000402280 RPRD2Q5VT52 1461 aaKnown RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 LETM1O95202 739 aaPredicted RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 HMGB1P09429 215 aaKnown RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 TAF3Q5VWG9 929 aa6.56□□□□□ -1.36
NLRC4-203ENST00000402280 GZF1Q9H116 711 aaPredicted RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 YEATS2Q9ULM3 1422 aa6.56□□□□□ -1.36
NLRC4-203ENST00000402280 PZPP20742 1482 aa6.56□□□□□ -1.36
NLRC4-203ENST00000402280 RRP1P56182 461 aaKnown RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 FAM43BQ6ZT52 329 aaPredicted RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 ZNF526Q8TF50 670 aaPredicted RBP6.56□□□□□ -1.36
NLRC4-203ENST00000402280 C3P01024 1663 aa6.56□□□□□ -1.36
NLRC4-203ENST00000402280 FAM161AQ3B820 660 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 DNTTIP2Q5QJE6 756 aaKnown RBP6.55□□□□□ -1.36
NLRC4-203ENST00000402280 GRPEL1Q9HAV7 217 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 CLTCQ00610 1675 aaKnown RBP6.55□□□□□ -1.36
NLRC4-203ENST00000402280 A2MP01023 1474 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 PREX1Q8TCU6 1659 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 SPATA31D1Q6ZQQ2 1576 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 ABCC3O15438 1527 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 SETD5Q9C0A6 1442 aa6.55□□□□□ -1.36
NLRC4-203ENST00000402280 CCDC94Q9BW85 323 aaPredicted RBP6.55□□□□□ -1.36
NLRC4-203ENST00000402280 DHX29Q7Z478 1369 aaKnown RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 SENP3-EIF4A1A0A087X0R7 540 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 VGFO15240 615 aaPredicted RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 ISY1Q9ULR0 285 aaKnown RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 BECN1Q14457 450 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 TRPM2O94759 1503 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 TONSLQ96HA7 1378 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 ANKRD30AQ9BXX3 1397 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 CLSTN1O94985 981 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 IRX3P78415 501 aaPredicted RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 FAM50AQ14320 339 aaKnown RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 SKAP1Q86WV1 359 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 PLCD4Q9BRC7 762 aa6.54□□□□□ -1.36
NLRC4-203ENST00000402280 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
NLRC4-203ENST00000402280 PTPRTO14522 1441 aa6.53□□□□□ -1.36
NLRC4-203ENST00000402280 CNTLNQ9NXG0 1405 aa6.53□□□□□ -1.36
NLRC4-203ENST00000402280 DYNC1I1O14576 645 aa6.53□□□□□ -1.36
NLRC4-203ENST00000402280 FAM193AP78312 1265 aa6.53□□□□□ -1.36
NLRC4-203ENST00000402280 KIAA1210Q9ULL0 1709 aa6.53□□□□□ -1.36
NLRC4-203ENST00000402280 MSNP26038 577 aaKnown RBP6.53□□□□□ -1.36
NLRC4-203ENST00000402280 UQCRHLA0A096LP55 91 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 UQCRHP07919 91 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 HNRNPMP52272 730 aaKnown RBP eCLIP6.52□□□□□ -1.37
NLRC4-203ENST00000402280 ZSCAN30Q86W11 494 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 LAMC1P11047 1609 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 MADDQ8WXG6 1647 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 C8orf34Q49A92 452 aa6.52□□□□□ -1.37
NLRC4-203ENST00000402280 TRAK2O60296 914 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 MCM4P33991 863 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 ANKRD50Q9ULJ7 1429 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 PSMD1Q99460 953 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 RCAN3Q9UKA8 241 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 SYNMO15061 1565 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 RIMS1Q86UR5 1692 aaKnown RBP6.51□□□□□ -1.37
NLRC4-203ENST00000402280 AFAP1Q8N556 730 aa6.51□□□□□ -1.37
NLRC4-203ENST00000402280 PUS7Q96PZ0 661 aaKnown RBP6.51□□□□□ -1.37
NLRC4-203ENST00000402280 KIF15Q9NS87 1388 aa6.5□□□□□ -1.37
NLRC4-203ENST00000402280 RAPGEF3O95398 923 aa6.5□□□□□ -1.37
NLRC4-203ENST00000402280 HSPA5P11021 654 aaKnown RBP6.5□□□□□ -1.37
NLRC4-203ENST00000402280 PPLO60437 1756 aa6.5□□□□□ -1.37
NLRC4-203ENST00000402280 MAPK8IP2Q13387 824 aaPredicted RBP6.5□□□□□ -1.37
NLRC4-203ENST00000402280 ANTXR1Q9H6X2 564 aa6.5□□□□□ -1.37
NLRC4-203ENST00000402280 CGNQ9P2M7 1197 aaKnown RBP6.5□□□□□ -1.37
NLRC4-203ENST00000402280 SETD1AO15047 1707 aaKnown RBP6.49□□□□□ -1.37
NLRC4-203ENST00000402280 E9PSI1 815 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 ZBTB22O15209 634 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 NOS1P29475 1434 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 KTN1Q86UP2 1357 aaKnown RBP6.49□□□□□ -1.37
NLRC4-203ENST00000402280 PTMAP06454 111 aaKnown RBP6.49□□□□□ -1.37
NLRC4-203ENST00000402280 TRHP20396 242 aaPredicted RBP6.49□□□□□ -1.37
NLRC4-203ENST00000402280 KIF1BO60333 1816 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 SPAG9O60271 1321 aaKnown RBP6.49□□□□□ -1.37
NLRC4-203ENST00000402280 CBX1P83916 185 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 CCDC173Q0VFZ6 552 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 CERS3Q8IU89 383 aa6.49□□□□□ -1.37
NLRC4-203ENST00000402280 ADGRB3O60242 1522 aa6.48□□□□□ -1.37
NLRC4-203ENST00000402280 SOX12O15370 315 aa6.48□□□□□ -1.37
NLRC4-203ENST00000402280 CLTCL1P53675 1640 aa6.48□□□□□ -1.37
NLRC4-203ENST00000402280 MYO3AQ8NEV4 1616 aa6.48□□□□□ -1.37
NLRC4-203ENST00000402280 TMEM131LA2VDJ0 1609 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms