RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 ITSN1Q15811 1721 aa9.37□□□□□ -0.91
CX3CR1-202ENST00000399220 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
CX3CR1-202ENST00000399220 CD163L1Q9NR16 1453 aa9.36□□□□□ -0.91
CX3CR1-202ENST00000399220 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
CX3CR1-202ENST00000399220 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
CX3CR1-202ENST00000399220 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
CX3CR1-202ENST00000399220 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
CX3CR1-202ENST00000399220 EVC2Q86UK5 1308 aa9.35□□□□□ -0.91
CX3CR1-202ENST00000399220 BLMP54132 1417 aaPredicted RBP9.35□□□□□ -0.91
CX3CR1-202ENST00000399220 SHPRHQ149N8 1683 aa9.35□□□□□ -0.91
CX3CR1-202ENST00000399220 PANK3Q9H999 370 aa9.35□□□□□ -0.91
CX3CR1-202ENST00000399220 TRHP20396 242 aaPredicted RBP9.34□□□□□ -0.91
CX3CR1-202ENST00000399220 LRRC7Q96NW7 1537 aa9.34□□□□□ -0.91
CX3CR1-202ENST00000399220 METP08581 1390 aa9.33□□□□□ -0.92
CX3CR1-202ENST00000399220 NLRP13Q86W25 1043 aa9.33□□□□□ -0.92
CX3CR1-202ENST00000399220 PHF23Q9BUL5 403 aaPredicted RBP9.33□□□□□ -0.92
CX3CR1-202ENST00000399220 PNISRQ8TF01 805 aaKnown RBP9.33□□□□□ -0.92
CX3CR1-202ENST00000399220 FMN2Q9NZ56 1722 aa9.32□□□□□ -0.92
CX3CR1-202ENST00000399220 MLECQ14165 292 aa9.32□□□□□ -0.92
CX3CR1-202ENST00000399220 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
CX3CR1-202ENST00000399220 NALCNQ8IZF0 1738 aa9.32□□□□□ -0.92
CX3CR1-202ENST00000399220 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
CX3CR1-202ENST00000399220 TMEM132EQ6IEE7 984 aa9.31□□□□□ -0.92
CX3CR1-202ENST00000399220 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
CX3CR1-202ENST00000399220 PTPRUQ92729 1446 aa9.31□□□□□ -0.92
CX3CR1-202ENST00000399220 THEMISQ8N1K5 641 aaPredicted RBP9.31□□□□□ -0.92
CX3CR1-202ENST00000399220 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
CX3CR1-202ENST00000399220 CCDC184Q52MB2 194 aa9.3□□□□□ -0.92
CX3CR1-202ENST00000399220 STAG3Q9UJ98 1225 aa9.3□□□□□ -0.92
CX3CR1-202ENST00000399220 POLR3AO14802 1390 aaPredicted RBP9.3□□□□□ -0.92
CX3CR1-202ENST00000399220 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
CX3CR1-202ENST00000399220 GTF3C3Q9Y5Q9 886 aa9.29□□□□□ -0.92
CX3CR1-202ENST00000399220 MYT1Q01538 1121 aa9.29□□□□□ -0.92
CX3CR1-202ENST00000399220 LTKP29376 864 aa9.29□□□□□ -0.92
CX3CR1-202ENST00000399220 SMG6Q86US8 1419 aaKnown RBP9.28□□□□□ -0.92
CX3CR1-202ENST00000399220 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
CX3CR1-202ENST00000399220 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
CX3CR1-202ENST00000399220 ANKARQ7Z5J8 1434 aa9.28□□□□□ -0.92
CX3CR1-202ENST00000399220 NSD3Q9BZ95 1437 aa9.28□□□□□ -0.92
CX3CR1-202ENST00000399220 NCBP3Q53F19 620 aaKnown RBP9.28□□□□□ -0.92
CX3CR1-202ENST00000399220 PRAM1Q96QH2 718 aa9.27□□□□□ -0.92
CX3CR1-202ENST00000399220 CGNL1Q0VF96 1302 aa9.27□□□□□ -0.93
CX3CR1-202ENST00000399220 ROBO2Q9HCK4 1378 aa9.27□□□□□ -0.93
CX3CR1-202ENST00000399220 EID1Q9Y6B2 187 aa9.27□□□□□ -0.93
CX3CR1-202ENST00000399220 A0A1W2PP64 1363 aa9.27□□□□□ -0.93
CX3CR1-202ENST00000399220 PLEKHH1Q9ULM0 1364 aa9.27□□□□□ -0.93
CX3CR1-202ENST00000399220 COL3A1P02461 1466 aaPredicted RBP9.26□□□□□ -0.93
CX3CR1-202ENST00000399220 PPP2R1AP30153 589 aa9.26□□□□□ -0.93
CX3CR1-202ENST00000399220 EDC4Q6P2E9 1401 aaKnown RBP9.26□□□□□ -0.93
CX3CR1-202ENST00000399220 MARF1Q9Y4F3 1742 aaKnown RBP9.26□□□□□ -0.93
CX3CR1-202ENST00000399220 SSH2Q76I76 1423 aa9.25□□□□□ -0.93
CX3CR1-202ENST00000399220 CEBPAP49715 358 aaPredicted RBP9.25□□□□□ -0.93
CX3CR1-202ENST00000399220 NUTM2DQ5VT03 806 aaPredicted RBP9.25□□□□□ -0.93
CX3CR1-202ENST00000399220 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
CX3CR1-202ENST00000399220 TXNDC2Q86VQ3 553 aa9.24□□□□□ -0.93
CX3CR1-202ENST00000399220 YTHDC1Q96MU7 727 aaKnown RBP9.24□□□□□ -0.93
CX3CR1-202ENST00000399220 NKTRP30414 1462 aaKnown RBP9.24□□□□□ -0.93
CX3CR1-202ENST00000399220 NCOA3Q9Y6Q9 1424 aa9.24□□□□□ -0.93
CX3CR1-202ENST00000399220 NGEFQ8N5V2 710 aa9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 CDK19Q9BWU1 502 aa9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 PNPLA6Q8IY17 1366 aa9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 IQSEC2Q5JU85 1478 aa9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 TMC1Q8TDI8 760 aa9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 NPHP4O75161 1426 aaPredicted RBP9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
CX3CR1-202ENST00000399220 TERF2IPQ9NYB0 399 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 AATKQ6ZMQ8 1374 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 RGPD8O14715 1765 aaPredicted RBP9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 SLC12A5Q9H2X9 1139 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 POGKQ9P215 609 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 PPIP5K1Q6PFW1 1433 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 PLEKHG3A1L390 1219 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 POLR3GLQ9BT43 218 aa9.22□□□□□ -0.93
CX3CR1-202ENST00000399220 KIF1AQ12756 1690 aa9.21□□□□□ -0.93
CX3CR1-202ENST00000399220 MST1RQ04912 1400 aa9.21□□□□□ -0.94
CX3CR1-202ENST00000399220 PDE3BQ13370 1112 aa9.21□□□□□ -0.94
CX3CR1-202ENST00000399220 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 RGPD1P0DJD0 1748 aa9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 RNF123Q5XPI4 1314 aa9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 MAP2P11137 1827 aaKnown RBP9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 CC2D1BQ5T0F9 858 aaKnown RBP9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 ANKLE2Q86XL3 938 aa9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 STK26Q9P289 416 aa9.2□□□□□ -0.94
CX3CR1-202ENST00000399220 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 STRCP1A6NGW2 1772 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 STRCQ7RTU9 1775 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 PIK3C2AO00443 1686 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 OVOS2A0A0J9YW53 1432 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 OVOS2Q6IE36 1432 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 ADGRL3Q9HAR2 1447 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 HNRNPUQ00839 825 aaKnown RBP eCLIP9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 WAPLQ7Z5K2 1190 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 ZNF521Q96K83 1311 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 USP31Q70CQ4 1352 aa9.19□□□□□ -0.94
CX3CR1-202ENST00000399220 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 HDGFL2Q7Z4V5 671 aaPredicted RBP9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 CCDC61Q9Y6R9 512 aa9.18□□□□□ -0.94
CX3CR1-202ENST00000399220 PRR36Q9H6K5 1346 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms