RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
RPRD1A-202ENST00000399022 MCCP23508 829 aa18.01■□□□□ 0.47
RPRD1A-202ENST00000399022 WDR62O43379 1518 aa18■□□□□ 0.47
RPRD1A-202ENST00000399022 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
RPRD1A-202ENST00000399022 LMOD3Q0VAK6 560 aa17.99■□□□□ 0.47
RPRD1A-202ENST00000399022 MCTP1Q6DN14 999 aa17.99■□□□□ 0.47
RPRD1A-202ENST00000399022 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
RPRD1A-202ENST00000399022 PDZRN3Q9UPQ7 1066 aa17.99■□□□□ 0.47
RPRD1A-202ENST00000399022 EID1Q9Y6B2 187 aa17.99■□□□□ 0.47
RPRD1A-202ENST00000399022 ZNF771Q7L3S4 317 aaPredicted RBP17.98■□□□□ 0.47
RPRD1A-202ENST00000399022 ST18O60284 1047 aa17.98■□□□□ 0.47
RPRD1A-202ENST00000399022 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
RPRD1A-202ENST00000399022 EXOSC9Q06265 439 aaKnown RBP17.98■□□□□ 0.47
RPRD1A-202ENST00000399022 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
RPRD1A-202ENST00000399022 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
RPRD1A-202ENST00000399022 TNNT3P45378 269 aaPredicted RBP17.97■□□□□ 0.47
RPRD1A-202ENST00000399022 MAGI3Q5TCQ9 1506 aa17.97■□□□□ 0.47
RPRD1A-202ENST00000399022 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
RPRD1A-202ENST00000399022 KCNJ4P48050 445 aa17.96■□□□□ 0.47
RPRD1A-202ENST00000399022 CCDC173Q0VFZ6 552 aa17.96■□□□□ 0.47
RPRD1A-202ENST00000399022 RNF214Q8ND24 703 aa17.96■□□□□ 0.47
RPRD1A-202ENST00000399022 MTERF4Q7Z6M4 381 aaKnown RBP17.96■□□□□ 0.47
RPRD1A-202ENST00000399022 CAVIN1Q6NZI2 390 aaKnown RBP17.95■□□□□ 0.46
RPRD1A-202ENST00000399022 KIAA0556O60303 1618 aa17.95■□□□□ 0.46
RPRD1A-202ENST00000399022 SLFN5Q08AF3 891 aa17.95■□□□□ 0.46
RPRD1A-202ENST00000399022 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
RPRD1A-202ENST00000399022 CABP1Q9NZU7 370 aa17.94■□□□□ 0.46
RPRD1A-202ENST00000399022 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
RPRD1A-202ENST00000399022 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
RPRD1A-202ENST00000399022 PANK2Q9BZ23 570 aa17.93■□□□□ 0.46
RPRD1A-202ENST00000399022 GOLGA6L6A8MZA4 724 aa17.93■□□□□ 0.46
RPRD1A-202ENST00000399022 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
RPRD1A-202ENST00000399022 PHF14O94880 888 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 NRDCO43847 1150 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 TAOK2Q9UL54 1235 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 TRIM6-TRIM34B2RNG4 842 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 PDCL3Q9H2J4 239 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 PZPP20742 1482 aa17.92■□□□□ 0.46
RPRD1A-202ENST00000399022 CLCN1P35523 988 aa17.91■□□□□ 0.46
RPRD1A-202ENST00000399022 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
RPRD1A-202ENST00000399022 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
RPRD1A-202ENST00000399022 UQCRHLA0A096LP55 91 aa17.9■□□□□ 0.46
RPRD1A-202ENST00000399022 UQCRHP07919 91 aa17.9■□□□□ 0.46
RPRD1A-202ENST00000399022 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
RPRD1A-202ENST00000399022 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
RPRD1A-202ENST00000399022 RRAGDQ9NQL2 400 aaPredicted RBP17.9■□□□□ 0.46
RPRD1A-202ENST00000399022 RALGAPBQ86X10 1494 aa17.89■□□□□ 0.45
RPRD1A-202ENST00000399022 HMMRO75330 724 aa17.89■□□□□ 0.45
RPRD1A-202ENST00000399022 NUCB2P80303 420 aa17.89■□□□□ 0.45
RPRD1A-202ENST00000399022 ZSCAN30Q86W11 494 aa17.89■□□□□ 0.45
RPRD1A-202ENST00000399022 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
RPRD1A-202ENST00000399022 TBC1D2Q9BYX2 928 aa17.89■□□□□ 0.45
RPRD1A-202ENST00000399022 TESK2Q96S53 571 aa17.88■□□□□ 0.45
RPRD1A-202ENST00000399022 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
RPRD1A-202ENST00000399022 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
RPRD1A-202ENST00000399022 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
RPRD1A-202ENST00000399022 DHX29Q7Z478 1369 aaKnown RBP17.87■□□□□ 0.45
RPRD1A-202ENST00000399022 MPNDQ8N594 471 aa17.87■□□□□ 0.45
RPRD1A-202ENST00000399022 SYCP2Q9BX26 1530 aa17.87■□□□□ 0.45
RPRD1A-202ENST00000399022 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
RPRD1A-202ENST00000399022 NUTM2GQ5VZR2 741 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 CCDC39Q9UFE4 941 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 ADGRL1O94910 1474 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 C1orf115Q9H7X2 142 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 PRAG1Q86YV5 1406 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 GNAI1P63096 354 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 FGD1P98174 961 aa17.86■□□□□ 0.45
RPRD1A-202ENST00000399022 NOB1Q9ULX3 412 aaKnown RBP17.85■□□□□ 0.45
RPRD1A-202ENST00000399022 NAP1L2Q9ULW6 460 aaPredicted RBP17.84■□□□□ 0.45
RPRD1A-202ENST00000399022 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
RPRD1A-202ENST00000399022 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
RPRD1A-202ENST00000399022 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
RPRD1A-202ENST00000399022 AAMPQ13685 434 aa17.84■□□□□ 0.45
RPRD1A-202ENST00000399022 API5Q9BZZ5 524 aaKnown RBP17.83■□□□□ 0.44
RPRD1A-202ENST00000399022 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.44
RPRD1A-202ENST00000399022 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.44
RPRD1A-202ENST00000399022 IDI1Q13907 227 aa17.83■□□□□ 0.44
RPRD1A-202ENST00000399022 WDR63Q8IWG1 891 aa17.82■□□□□ 0.44
RPRD1A-202ENST00000399022 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
RPRD1A-202ENST00000399022 DNMT1P26358 1616 aaKnown RBP17.82■□□□□ 0.44
RPRD1A-202ENST00000399022 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
RPRD1A-202ENST00000399022 WAPLQ7Z5K2 1190 aa17.82■□□□□ 0.44
RPRD1A-202ENST00000399022 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
RPRD1A-202ENST00000399022 TRAPPC8Q9Y2L5 1435 aa17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 SCAF11Q99590 1463 aaKnown RBP17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 EIF2S2P20042 333 aaKnown RBP17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 ZNF592Q92610 1267 aa17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 FANCAO15360 1455 aa17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 KDM6BO15054 1643 aa17.81■□□□□ 0.44
RPRD1A-202ENST00000399022 NOS1P29475 1434 aa17.8■□□□□ 0.44
RPRD1A-202ENST00000399022 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
RPRD1A-202ENST00000399022 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
RPRD1A-202ENST00000399022 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms