RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 TXNDC2Q86VQ3 553 aa31.48■■■□□ 2.63
CDH23-206ENST00000398842 CARD14Q9BXL6 1004 aa31.48■■■□□ 2.63
CDH23-206ENST00000398842 CEP170BQ9Y4F5 1589 aaPredicted RBP31.48■■■□□ 2.63
CDH23-206ENST00000398842 THEMISQ8N1K5 641 aaPredicted RBP31.48■■■□□ 2.63
CDH23-206ENST00000398842 TECPR2O15040 1411 aa31.47■■■□□ 2.63
CDH23-206ENST00000398842 HNRNPUQ00839 825 aaKnown RBP eCLIP31.46■■■□□ 2.63
CDH23-206ENST00000398842 EID1Q9Y6B2 187 aa31.46■■■□□ 2.63
CDH23-206ENST00000398842 MED14O60244 1454 aa31.46■■■□□ 2.63
CDH23-206ENST00000398842 MINK1Q8N4C8 1332 aaPredicted RBP31.46■■■□□ 2.63
CDH23-206ENST00000398842 PNISRQ8TF01 805 aaKnown RBP31.45■■■□□ 2.63
CDH23-206ENST00000398842 SLC12A5Q9H2X9 1139 aa31.45■■■□□ 2.63
CDH23-206ENST00000398842 CABP2Q9NPB3 220 aa31.44■■■□□ 2.62
CDH23-206ENST00000398842 CPS1P31327 1500 aa31.44■■■□□ 2.62
CDH23-206ENST00000398842 BCANQ96GW7 911 aa31.43■■■□□ 2.62
CDH23-206ENST00000398842 SIRT1Q96EB6 747 aa31.43■■■□□ 2.62
CDH23-206ENST00000398842 PLEKHH1Q9ULM0 1364 aa31.43■■■□□ 2.62
CDH23-206ENST00000398842 ZNF142P52746 1687 aaPredicted RBP31.42■■■□□ 2.62
CDH23-206ENST00000398842 SETD1BQ9UPS6 1966 aaKnown RBP31.42■■■□□ 2.62
CDH23-206ENST00000398842 FAM135BQ49AJ0 1406 aa31.42■■■□□ 2.62
CDH23-206ENST00000398842 WAPLQ7Z5K2 1190 aa31.41■■■□□ 2.62
CDH23-206ENST00000398842 NINLQ9Y2I6 1382 aa31.4■■■□□ 2.62
CDH23-206ENST00000398842 USP32Q8NFA0 1604 aa31.4■■■□□ 2.62
CDH23-206ENST00000398842 GTF3C3Q9Y5Q9 886 aa31.4■■■□□ 2.62
CDH23-206ENST00000398842 ATAD2Q6PL18 1390 aa31.39■■■□□ 2.62
CDH23-206ENST00000398842 NSD3Q9BZ95 1437 aa31.38■■■□□ 2.61
CDH23-206ENST00000398842 SRPK2P78362 688 aaKnown RBP31.38■■■□□ 2.61
CDH23-206ENST00000398842 ANKRD36BQ8N2N9 1353 aa31.37■■■□□ 2.61
CDH23-206ENST00000398842 DIP2AQ14689 1571 aa31.35■■■□□ 2.61
CDH23-206ENST00000398842 CDK19Q9BWU1 502 aa31.35■■■□□ 2.61
CDH23-206ENST00000398842 PPP2R1AP30153 589 aa31.33■■■□□ 2.61
CDH23-206ENST00000398842 TBX22Q9Y458 520 aa31.32■■■□□ 2.6
CDH23-206ENST00000398842 SLC26A8Q96RN1 970 aa31.3■■■□□ 2.6
CDH23-206ENST00000398842 PTPRUQ92729 1446 aa31.3■■■□□ 2.6
CDH23-206ENST00000398842 ROBO2Q9HCK4 1378 aa31.29■■■□□ 2.6
CDH23-206ENST00000398842 ZBED9Q6R2W3 1325 aa31.28■■■□□ 2.6
CDH23-206ENST00000398842 CD163L1Q9NR16 1453 aa31.27■■■□□ 2.6
CDH23-206ENST00000398842 A0A1W2PP64 1363 aa31.27■■■□□ 2.6
CDH23-206ENST00000398842 WASLO00401 505 aaPredicted RBP31.24■■■□□ 2.59
CDH23-206ENST00000398842 CGNL1Q0VF96 1302 aa31.24■■■□□ 2.59
CDH23-206ENST00000398842 ADGRB2O60241 1585 aa31.23■■■□□ 2.59
CDH23-206ENST00000398842 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.22■■■□□ 2.59
CDH23-206ENST00000398842 INSRP06213 1382 aa31.21■■■□□ 2.59
CDH23-206ENST00000398842 TERF2IPQ9NYB0 399 aa31.2■■■□□ 2.59
CDH23-206ENST00000398842 NSD2O96028 1365 aa31.2■■■□□ 2.58
CDH23-206ENST00000398842 XRN1Q8IZH2 1706 aaKnown RBP31.2■■■□□ 2.58
CDH23-206ENST00000398842 PTCH1Q13635 1447 aa31.19■■■□□ 2.58
CDH23-206ENST00000398842 AMOTL2Q9Y2J4 779 aa31.18■■■□□ 2.58
CDH23-206ENST00000398842 ATP7BP35670 1465 aa31.18■■■□□ 2.58
CDH23-206ENST00000398842 ANKLE2Q86XL3 938 aa31.17■■■□□ 2.58
CDH23-206ENST00000398842 CABP1Q9NZU7 370 aa31.17■■■□□ 2.58
CDH23-206ENST00000398842 PIK3R4Q99570 1358 aa31.16■■■□□ 2.58
CDH23-206ENST00000398842 MORC1Q86VD1 984 aa31.15■■■□□ 2.58
CDH23-206ENST00000398842 HDGFL2Q7Z4V5 671 aaPredicted RBP31.14■■■□□ 2.58
CDH23-206ENST00000398842 ANKRD26Q9UPS8 1709 aa31.13■■■□□ 2.57
CDH23-206ENST00000398842 BLMP54132 1417 aaPredicted RBP31.12■■■□□ 2.57
CDH23-206ENST00000398842 HSPA2P54652 639 aa31.11■■■□□ 2.57
CDH23-206ENST00000398842 PPIP5K1Q6PFW1 1433 aa31.11■■■□□ 2.57
CDH23-206ENST00000398842 NUDT16Q96DE0 195 aaKnown RBP31.1■■■□□ 2.57
CDH23-206ENST00000398842 CPSF1Q10570 1443 aaKnown RBP31.08■■■□□ 2.57
CDH23-206ENST00000398842 KIF20BQ96Q89 1820 aa31.08■■■□□ 2.57
CDH23-206ENST00000398842 CHD2O14647 1828 aaKnown RBP31.07■■■□□ 2.56
CDH23-206ENST00000398842 CDC42BPGQ6DT37 1551 aa31.07■■■□□ 2.56
CDH23-206ENST00000398842 CCDC61Q9Y6R9 512 aa31.07■■■□□ 2.56
CDH23-206ENST00000398842 POLR3AO14802 1390 aaPredicted RBP31.07■■■□□ 2.56
CDH23-206ENST00000398842 LMTK3Q96Q04 1460 aa31.06■■■□□ 2.56
CDH23-206ENST00000398842 TOPAZ1Q8N9V7 1692 aa31.06■■■□□ 2.56
CDH23-206ENST00000398842 PRR36Q9H6K5 1346 aa31.06■■■□□ 2.56
CDH23-206ENST00000398842 NCKAP5LQ9HCH0 1330 aa31.06■■■□□ 2.56
CDH23-206ENST00000398842 ADAMTS8Q9UP79 889 aa31.05■■■□□ 2.56
CDH23-206ENST00000398842 AKAP12Q02952 1782 aa31.04■■■□□ 2.56
CDH23-206ENST00000398842 FYB1O15117 783 aa31.04■■■□□ 2.56
CDH23-206ENST00000398842 MON2Q7Z3U7 1717 aa31.03■■■□□ 2.56
CDH23-206ENST00000398842 WDR43Q15061 677 aaKnown RBP eCLIP31.02■■■□□ 2.56
CDH23-206ENST00000398842 KCNA6P17658 529 aa31.02■■■□□ 2.56
CDH23-206ENST00000398842 ITSN1Q15811 1721 aa31.02■■■□□ 2.56
CDH23-206ENST00000398842 NPHP4O75161 1426 aaPredicted RBP31.01■■■□□ 2.55
CDH23-206ENST00000398842 TNNT2P45379 298 aaPredicted RBP31■■■□□ 2.55
CDH23-206ENST00000398842 GGNBP2Q9H3C7 697 aa31■■■□□ 2.55
CDH23-206ENST00000398842 EDC4Q6P2E9 1401 aaKnown RBP30.99■■■□□ 2.55
CDH23-206ENST00000398842 SHPRHQ149N8 1683 aa30.98■■■□□ 2.55
CDH23-206ENST00000398842 SENP3-EIF4A1A0A087X0R7 540 aa30.97■■■□□ 2.55
CDH23-206ENST00000398842 SMG6Q86US8 1419 aaKnown RBP30.96■■■□□ 2.55
CDH23-206ENST00000398842 MTHFSP49914 203 aa30.94■■■□□ 2.54
CDH23-206ENST00000398842 PLEKHG3A1L390 1219 aa30.92■■■□□ 2.54
CDH23-206ENST00000398842 ZNF692Q9BU19 519 aaPredicted RBP30.92■■■□□ 2.54
CDH23-206ENST00000398842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.91■■■□□ 2.54
CDH23-206ENST00000398842 NKTRP30414 1462 aaKnown RBP30.9■■■□□ 2.54
CDH23-206ENST00000398842 NRKQ7Z2Y5 1582 aa30.89■■■□□ 2.54
CDH23-206ENST00000398842 RGPD8O14715 1765 aaPredicted RBP30.89■■■□□ 2.53
CDH23-206ENST00000398842 FMN2Q9NZ56 1722 aa30.88■■■□□ 2.53
CDH23-206ENST00000398842 NUDCQ9Y266 331 aa30.88■■■□□ 2.53
CDH23-206ENST00000398842 NALCNQ8IZF0 1738 aa30.87■■■□□ 2.53
CDH23-206ENST00000398842 CFAP53Q96M91 514 aa30.87■■■□□ 2.53
CDH23-206ENST00000398842 NUTM2FA1L443 756 aa30.87■■■□□ 2.53
CDH23-206ENST00000398842 ACEP12821 1306 aa30.86■■■□□ 2.53
CDH23-206ENST00000398842 SUPT16HQ9Y5B9 1047 aaKnown RBP30.85■■■□□ 2.53
CDH23-206ENST00000398842 ANKARQ7Z5J8 1434 aa30.85■■■□□ 2.53
CDH23-206ENST00000398842 NWD1Q149M9 1564 aa30.85■■■□□ 2.53
CDH23-206ENST00000398842 SALL2Q9Y467 1007 aaPredicted RBP30.84■■■□□ 2.53
CDH23-206ENST00000398842 PDE3BQ13370 1112 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms