RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 SAFB2Q14151 953 aaKnown RBP eCLIP25.28■■□□□ 1.64
MBD1-208ENST00000398493 TMEM94Q12767 1356 aa25.28■■□□□ 1.64
MBD1-208ENST00000398493 SIRT1Q96EB6 747 aa25.27■■□□□ 1.64
MBD1-208ENST00000398493 CPS1P31327 1500 aa25.27■■□□□ 1.64
MBD1-208ENST00000398493 DLC1Q96QB1 1528 aa25.26■■□□□ 1.63
MBD1-208ENST00000398493 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
MBD1-208ENST00000398493 POGKQ9P215 609 aa25.24■■□□□ 1.63
MBD1-208ENST00000398493 FAM135BQ49AJ0 1406 aa25.24■■□□□ 1.63
MBD1-208ENST00000398493 ARHGEF28Q8N1W1 1705 aaKnown RBP25.23■■□□□ 1.63
MBD1-208ENST00000398493 GTF3C3Q9Y5Q9 886 aa25.22■■□□□ 1.63
MBD1-208ENST00000398493 ST20-MTHFSA0A0A6YYL1 179 aa25.2■■□□□ 1.62
MBD1-208ENST00000398493 ILDR1Q86SU0 546 aaPredicted RBP25.2■■□□□ 1.62
MBD1-208ENST00000398493 CENPJQ9HC77 1338 aaPredicted RBP25.2■■□□□ 1.62
MBD1-208ENST00000398493 XIRP1Q702N8 1843 aaKnown RBP25.18■■□□□ 1.62
MBD1-208ENST00000398493 C14orf37Q86TY3 774 aa25.18■■□□□ 1.62
MBD1-208ENST00000398493 MINK1Q8N4C8 1332 aaPredicted RBP25.18■■□□□ 1.62
MBD1-208ENST00000398493 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
MBD1-208ENST00000398493 EIF3AQ14152 1382 aaKnown RBP25.16■■□□□ 1.62
MBD1-208ENST00000398493 CERKQ8TCT0 537 aa25.16■■□□□ 1.62
MBD1-208ENST00000398493 NCOA3Q9Y6Q9 1424 aa25.15■■□□□ 1.62
MBD1-208ENST00000398493 POLR3GLQ9BT43 218 aa25.14■■□□□ 1.62
MBD1-208ENST00000398493 C19orf44Q9H6X5 657 aa25.14■■□□□ 1.61
MBD1-208ENST00000398493 ADGRL3Q9HAR2 1447 aa25.13■■□□□ 1.61
MBD1-208ENST00000398493 TESK2Q96S53 571 aa25.13■■□□□ 1.61
MBD1-208ENST00000398493 NALCNQ8IZF0 1738 aa25.11■■□□□ 1.61
MBD1-208ENST00000398493 PRKRIP1Q9H875 184 aaPredicted RBP25.11■■□□□ 1.61
MBD1-208ENST00000398493 MSH6P52701 1360 aa25.09■■□□□ 1.61
MBD1-208ENST00000398493 QRICH2Q9H0J4 1663 aa25.08■■□□□ 1.61
MBD1-208ENST00000398493 NUTM2FA1L443 756 aa25.07■■□□□ 1.6
MBD1-208ENST00000398493 WASLO00401 505 aaPredicted RBP25.06■■□□□ 1.6
MBD1-208ENST00000398493 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
MBD1-208ENST00000398493 CDK19Q9BWU1 502 aa25.05■■□□□ 1.6
MBD1-208ENST00000398493 ATF3P18847 181 aa25.04■■□□□ 1.6
MBD1-208ENST00000398493 TULP4Q9NRJ4 1543 aa25.03■■□□□ 1.6
MBD1-208ENST00000398493 ADGRB2O60241 1585 aa25.03■■□□□ 1.6
MBD1-208ENST00000398493 CADPS2Q86UW7 1296 aa25.02■■□□□ 1.6
MBD1-208ENST00000398493 CABP2Q9NPB3 220 aa25.02■■□□□ 1.6
MBD1-208ENST00000398493 CDC42BPGQ6DT37 1551 aa25.01■■□□□ 1.59
MBD1-208ENST00000398493 DCCP43146 1447 aa25.01■■□□□ 1.59
MBD1-208ENST00000398493 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
MBD1-208ENST00000398493 DISP3Q9P2K9 1392 aa25.01■■□□□ 1.59
MBD1-208ENST00000398493 PRR36Q9H6K5 1346 aa24.99■■□□□ 1.59
MBD1-208ENST00000398493 TMF1P82094 1093 aa24.99■■□□□ 1.59
MBD1-208ENST00000398493 EVC2Q86UK5 1308 aa24.99■■□□□ 1.59
MBD1-208ENST00000398493 MST1RQ04912 1400 aa24.98■■□□□ 1.59
MBD1-208ENST00000398493 SLAIN2Q9P270 581 aa24.98■■□□□ 1.59
MBD1-208ENST00000398493 SRPK2P78362 688 aaKnown RBP24.98■■□□□ 1.59
MBD1-208ENST00000398493 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
MBD1-208ENST00000398493 PELP1Q8IZL8 1130 aaKnown RBP24.97■■□□□ 1.59
MBD1-208ENST00000398493 C1orf167Q5SNV9 1468 aa24.95■■□□□ 1.59
MBD1-208ENST00000398493 NUDT16Q96DE0 195 aaKnown RBP24.95■■□□□ 1.58
MBD1-208ENST00000398493 ORAI2Q96SN7 254 aa24.95■■□□□ 1.58
MBD1-208ENST00000398493 SLC24A1O60721 1099 aa24.94■■□□□ 1.58
MBD1-208ENST00000398493 TOM1O60784 492 aa24.94■■□□□ 1.58
MBD1-208ENST00000398493 MRS2Q9HD23 443 aa24.94■■□□□ 1.58
MBD1-208ENST00000398493 FMN2Q9NZ56 1722 aa24.94■■□□□ 1.58
MBD1-208ENST00000398493 USP32Q8NFA0 1604 aa24.92■■□□□ 1.58
MBD1-208ENST00000398493 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
MBD1-208ENST00000398493 ATP7BP35670 1465 aa24.92■■□□□ 1.58
MBD1-208ENST00000398493 PIP4K2BP78356 416 aa24.91■■□□□ 1.58
MBD1-208ENST00000398493 CDCA8Q53HL2 280 aa24.91■■□□□ 1.58
MBD1-208ENST00000398493 ESCO1Q5FWF5 840 aa24.91■■□□□ 1.58
MBD1-208ENST00000398493 BRINP3Q76B58 766 aa24.89■■□□□ 1.58
MBD1-208ENST00000398493 ANKARQ7Z5J8 1434 aa24.89■■□□□ 1.58
MBD1-208ENST00000398493 PMFBP1Q8TBY8 1022 aa24.88■■□□□ 1.57
MBD1-208ENST00000398493 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
MBD1-208ENST00000398493 CCDC61Q9Y6R9 512 aa24.88■■□□□ 1.57
MBD1-208ENST00000398493 RALBP1Q15311 655 aa24.87■■□□□ 1.57
MBD1-208ENST00000398493 RGPD8O14715 1765 aaPredicted RBP24.87■■□□□ 1.57
MBD1-208ENST00000398493 CABP1Q9NZU7 370 aa24.86■■□□□ 1.57
MBD1-208ENST00000398493 HNRNPUQ00839 825 aaKnown RBP eCLIP24.86■■□□□ 1.57
MBD1-208ENST00000398493 PUS7Q96PZ0 661 aaKnown RBP24.86■■□□□ 1.57
MBD1-208ENST00000398493 CCDC184Q52MB2 194 aa24.85■■□□□ 1.57
MBD1-208ENST00000398493 DDX17Q92841 729 aaKnown RBP24.85■■□□□ 1.57
MBD1-208ENST00000398493 SLC12A5Q9H2X9 1139 aa24.84■■□□□ 1.57
MBD1-208ENST00000398493 PHF8Q9UPP1 1060 aa24.84■■□□□ 1.57
MBD1-208ENST00000398493 ATAD2Q6PL18 1390 aa24.83■■□□□ 1.57
MBD1-208ENST00000398493 PPIP5K1Q6PFW1 1433 aa24.83■■□□□ 1.57
MBD1-208ENST00000398493 FAM9BQ8IZU0 186 aa24.82■■□□□ 1.56
MBD1-208ENST00000398493 TMC1Q8TDI8 760 aa24.82■■□□□ 1.56
MBD1-208ENST00000398493 PLEKHG3A1L390 1219 aa24.81■■□□□ 1.56
MBD1-208ENST00000398493 FOXO3O43524 673 aa24.81■■□□□ 1.56
MBD1-208ENST00000398493 CNGB1Q14028 1251 aaPredicted RBP24.8■■□□□ 1.56
MBD1-208ENST00000398493 ROBO1Q9Y6N7 1651 aa24.8■■□□□ 1.56
MBD1-208ENST00000398493 TOPAZ1Q8N9V7 1692 aa24.79■■□□□ 1.56
MBD1-208ENST00000398493 ACEP12821 1306 aa24.78■■□□□ 1.56
MBD1-208ENST00000398493 XPCQ01831 940 aaPredicted RBP24.77■■□□□ 1.56
MBD1-208ENST00000398493 MYBBP1AQ9BQG0 1328 aaKnown RBP24.77■■□□□ 1.56
MBD1-208ENST00000398493 PER1O15534 1290 aaPredicted RBP24.76■■□□□ 1.55
MBD1-208ENST00000398493 NGDNQ8NEJ9 315 aaKnown RBP24.76■■□□□ 1.55
MBD1-208ENST00000398493 PANK3Q9H999 370 aa24.76■■□□□ 1.55
MBD1-208ENST00000398493 CD163L1Q9NR16 1453 aa24.75■■□□□ 1.55
MBD1-208ENST00000398493 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
MBD1-208ENST00000398493 BRD4O60885 1362 aaPredicted RBP24.73■■□□□ 1.55
MBD1-208ENST00000398493 ITSN1Q15811 1721 aa24.72■■□□□ 1.55
MBD1-208ENST00000398493 PSME1Q06323 249 aa24.71■■□□□ 1.55
MBD1-208ENST00000398493 CPSF1Q10570 1443 aaKnown RBP24.71■■□□□ 1.55
MBD1-208ENST00000398493 MYOM1P52179 1685 aa24.71■■□□□ 1.55
MBD1-208ENST00000398493 NPHP3Q7Z494 1330 aa24.71■■□□□ 1.55
MBD1-208ENST00000398493 KRT28Q7Z3Y7 464 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms