RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 GPR153Q6NV75 609 aa9.93□□□□□ -0.82
CEP290-202ENST00000397838 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
CEP290-202ENST00000397838 GCGRP47871 477 aa9.91□□□□□ -0.82
CEP290-202ENST00000397838 TRIM6-TRIM34B2RNG4 842 aa9.9□□□□□ -0.82
CEP290-202ENST00000397838 WASHC4Q2M389 1173 aa9.9□□□□□ -0.82
CEP290-202ENST00000397838 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
CEP290-202ENST00000397838 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
CEP290-202ENST00000397838 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
CEP290-202ENST00000397838 MAFBQ9Y5Q3 323 aaPredicted RBP9.89□□□□□ -0.83
CEP290-202ENST00000397838 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
CEP290-202ENST00000397838 PER1O15534 1290 aaPredicted RBP9.88□□□□□ -0.83
CEP290-202ENST00000397838 MTMR2Q13614 643 aa9.88□□□□□ -0.83
CEP290-202ENST00000397838 CCDC27Q2M243 656 aa9.88□□□□□ -0.83
CEP290-202ENST00000397838 NR6A1Q15406 480 aa9.87□□□□□ -0.83
CEP290-202ENST00000397838 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
CEP290-202ENST00000397838 SND1Q7KZF4 910 aaKnown RBP eCLIP9.86□□□□□ -0.83
CEP290-202ENST00000397838 PDE4CQ08493 712 aa9.86□□□□□ -0.83
CEP290-202ENST00000397838 PIK3CDO00329 1044 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 HELBQ8NG08 1087 aaPredicted RBP9.84□□□□□ -0.83
CEP290-202ENST00000397838 UNCXA6NJT0 531 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 ATG7O95352 703 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 POTEJP0CG39 1038 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 PTPREP23469 700 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 FUT2Q10981 343 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 STK32AQ8WU08 396 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 ZMIZ1Q9ULJ6 1067 aa9.84□□□□□ -0.83
CEP290-202ENST00000397838 E9PSI1 815 aa9.83□□□□□ -0.84
CEP290-202ENST00000397838 PPP4R3BQ5MIZ7 849 aa9.83□□□□□ -0.84
CEP290-202ENST00000397838 SWT1Q5T5J6 900 aaKnown RBP9.83□□□□□ -0.84
CEP290-202ENST00000397838 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
CEP290-202ENST00000397838 PATL2C9JE40 543 aaKnown RBP9.82□□□□□ -0.84
CEP290-202ENST00000397838 USP46P62068 366 aa9.82□□□□□ -0.84
CEP290-202ENST00000397838 PACS2Q86VP3 889 aa9.82□□□□□ -0.84
CEP290-202ENST00000397838 PHLDB3Q6NSJ2 640 aa9.81□□□□□ -0.84
CEP290-202ENST00000397838 KANK4Q5T7N3 995 aaPredicted RBP9.8□□□□□ -0.84
CEP290-202ENST00000397838 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
CEP290-202ENST00000397838 SEPT9Q9UHD8 586 aaPredicted RBP9.8□□□□□ -0.84
CEP290-202ENST00000397838 KIAA1468Q9P260 1216 aa9.8□□□□□ -0.84
CEP290-202ENST00000397838 SLAIN2Q9P270 581 aa9.8□□□□□ -0.84
CEP290-202ENST00000397838 DOK7Q18PE1 504 aa9.78□□□□□ -0.84
CEP290-202ENST00000397838 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
CEP290-202ENST00000397838 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
CEP290-202ENST00000397838 ATP9BO43861 1147 aa9.77□□□□□ -0.85
CEP290-202ENST00000397838 SCNN1AP37088 669 aa9.76□□□□□ -0.85
CEP290-202ENST00000397838 SLF2Q8IX21 1173 aa9.76□□□□□ -0.85
CEP290-202ENST00000397838 FBXO45P0C2W1 286 aa9.75□□□□□ -0.85
CEP290-202ENST00000397838 NOM1Q5C9Z4 860 aaKnown RBP9.75□□□□□ -0.85
CEP290-202ENST00000397838 DEPDC4Q8N2C3 294 aa9.75□□□□□ -0.85
CEP290-202ENST00000397838 AMOTL2Q9Y2J4 779 aa9.75□□□□□ -0.85
CEP290-202ENST00000397838 GNEQ9Y223 722 aaKnown RBP9.74□□□□□ -0.85
CEP290-202ENST00000397838 PSEN2P49810 448 aa9.73□□□□□ -0.85
CEP290-202ENST00000397838 ZBED2Q9BTP6 218 aa9.73□□□□□ -0.85
CEP290-202ENST00000397838 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
CEP290-202ENST00000397838 POTEB2H3BUK9 544 aa9.73□□□□□ -0.85
CEP290-202ENST00000397838 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
CEP290-202ENST00000397838 CFHP08603 1231 aa9.72□□□□□ -0.85
CEP290-202ENST00000397838 PUS10Q3MIT2 529 aaKnown RBP9.72□□□□□ -0.85
CEP290-202ENST00000397838 CRTC2Q53ET0 693 aaPredicted RBP9.72□□□□□ -0.85
CEP290-202ENST00000397838 SOX11P35716 441 aa9.72□□□□□ -0.85
CEP290-202ENST00000397838 TXNDC2Q86VQ3 553 aa9.72□□□□□ -0.85
CEP290-202ENST00000397838 RIMBP2O15034 1052 aa9.71□□□□□ -0.85
CEP290-202ENST00000397838 NOVA2Q9UNW9 492 aaKnown RBP9.71□□□□□ -0.85
CEP290-202ENST00000397838 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
CEP290-202ENST00000397838 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
CEP290-202ENST00000397838 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
CEP290-202ENST00000397838 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
CEP290-202ENST00000397838 DNAJC14Q6Y2X3 702 aaPredicted RBP9.68□□□□□ -0.86
CEP290-202ENST00000397838 SAMD7Q7Z3H4 446 aa9.68□□□□□ -0.86
CEP290-202ENST00000397838 KIAA1522Q9P206 1035 aaPredicted RBP9.68□□□□□ -0.86
CEP290-202ENST00000397838 SERPINB4P48594 390 aa9.68□□□□□ -0.86
CEP290-202ENST00000397838 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
CEP290-202ENST00000397838 RSPH4AQ5TD94 716 aa9.68□□□□□ -0.86
CEP290-202ENST00000397838 POTEEQ6S8J3 1075 aa9.68□□□□□ -0.86
CEP290-202ENST00000397838 RNF40O75150 1001 aa9.67□□□□□ -0.86
CEP290-202ENST00000397838 FAM69CQ0P6D2 419 aa9.67□□□□□ -0.86
CEP290-202ENST00000397838 USP17L5A8MUK1 530 aa9.67□□□□□ -0.86
CEP290-202ENST00000397838 NR1H3Q13133 447 aa9.67□□□□□ -0.86
CEP290-202ENST00000397838 MYT1LQ9UL68 1186 aa9.67□□□□□ -0.86
CEP290-202ENST00000397838 SLC27A5Q9Y2P5 690 aa9.67□□□□□ -0.86
CEP290-202ENST00000397838 SKIP12755 728 aa9.66□□□□□ -0.86
CEP290-202ENST00000397838 ATP6V1AP38606 617 aa9.66□□□□□ -0.86
CEP290-202ENST00000397838 ELOAQ14241 798 aaKnown RBP9.66□□□□□ -0.86
CEP290-202ENST00000397838 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
CEP290-202ENST00000397838 PSDA5PKW4 1024 aaPredicted RBP9.66□□□□□ -0.86
CEP290-202ENST00000397838 IGSF5Q9NSI5 407 aa9.66□□□□□ -0.86
CEP290-202ENST00000397838 MAP10Q9P2G4 905 aa9.66□□□□□ -0.86
CEP290-202ENST00000397838 SSFA2P28290 1259 aa9.65□□□□□ -0.86
CEP290-202ENST00000397838 RETREG3Q86VR2 466 aa9.65□□□□□ -0.86
CEP290-202ENST00000397838 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L21D6R901 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
CEP290-202ENST00000397838 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms