RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 ITPRIPQ8IWB1 547 aa25.08■■□□□ 1.6
AGAP3-202ENST00000397238 UNC13BO14795 1591 aa25.07■■□□□ 1.6
AGAP3-202ENST00000397238 FANCAO15360 1455 aa25.06■■□□□ 1.6
AGAP3-202ENST00000397238 SYNMO15061 1565 aa25.06■■□□□ 1.6
AGAP3-202ENST00000397238 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
AGAP3-202ENST00000397238 HSCBQ8IWL3 235 aa25.06■■□□□ 1.6
AGAP3-202ENST00000397238 MVPQ14764 893 aaKnown RBP25.05■■□□□ 1.6
AGAP3-202ENST00000397238 SMC4Q9NTJ3 1288 aa25.05■■□□□ 1.6
AGAP3-202ENST00000397238 DZIP1LQ8IYY4 767 aaKnown RBP25.05■■□□□ 1.6
AGAP3-202ENST00000397238 NPC1L1Q9UHC9 1359 aa25.05■■□□□ 1.6
AGAP3-202ENST00000397238 NINLQ9Y2I6 1382 aa25.05■■□□□ 1.6
AGAP3-202ENST00000397238 ZKSCAN2Q63HK3 967 aa25.04■■□□□ 1.6
AGAP3-202ENST00000397238 NGEFQ8N5V2 710 aa25.04■■□□□ 1.6
AGAP3-202ENST00000397238 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
AGAP3-202ENST00000397238 UHRF1BP1LA0JNW5 1464 aa25.03■■□□□ 1.6
AGAP3-202ENST00000397238 ABCC1P33527 1531 aa25.03■■□□□ 1.6
AGAP3-202ENST00000397238 MYH16Q9H6N6 1097 aa25.03■■□□□ 1.6
AGAP3-202ENST00000397238 KANK1Q14678 1352 aa25.02■■□□□ 1.6
AGAP3-202ENST00000397238 FSD2A1L4K1 749 aa25.01■■□□□ 1.59
AGAP3-202ENST00000397238 U2SURPO15042 1029 aaKnown RBP25.01■■□□□ 1.59
AGAP3-202ENST00000397238 NSD3Q9BZ95 1437 aa25.01■■□□□ 1.59
AGAP3-202ENST00000397238 MAST1Q9Y2H9 1570 aa25.01■■□□□ 1.59
AGAP3-202ENST00000397238 TMEM132EQ6IEE7 984 aa25.01■■□□□ 1.59
AGAP3-202ENST00000397238 ASXL2Q76L83 1435 aa25.01■■□□□ 1.59
AGAP3-202ENST00000397238 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
AGAP3-202ENST00000397238 ATP10AO60312 1499 aa25■■□□□ 1.59
AGAP3-202ENST00000397238 ADGRL1O94910 1474 aa25■■□□□ 1.59
AGAP3-202ENST00000397238 HSP90AA1P07900 732 aaKnown RBP24.99■■□□□ 1.59
AGAP3-202ENST00000397238 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
AGAP3-202ENST00000397238 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
AGAP3-202ENST00000397238 RNF17Q9BXT8 1623 aaKnown RBP24.99■■□□□ 1.59
AGAP3-202ENST00000397238 WDR63Q8IWG1 891 aa24.99■■□□□ 1.59
AGAP3-202ENST00000397238 GRPEL1Q9HAV7 217 aa24.99■■□□□ 1.59
AGAP3-202ENST00000397238 POLR3AO14802 1390 aaPredicted RBP24.98■■□□□ 1.59
AGAP3-202ENST00000397238 NUTM2DQ5VT03 806 aaPredicted RBP24.98■■□□□ 1.59
AGAP3-202ENST00000397238 MRE11P49959 708 aa24.97■■□□□ 1.59
AGAP3-202ENST00000397238 LNPKQ9C0E8 428 aa24.97■■□□□ 1.59
AGAP3-202ENST00000397238 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
AGAP3-202ENST00000397238 ERVK-7P63135 1459 aa24.97■■□□□ 1.59
AGAP3-202ENST00000397238 SAFB2Q14151 953 aaKnown RBP eCLIP24.97■■□□□ 1.59
AGAP3-202ENST00000397238 HSP90AB1P08238 724 aaKnown RBP24.96■■□□□ 1.59
AGAP3-202ENST00000397238 VSIG10Q8N0Z9 540 aa24.96■■□□□ 1.59
AGAP3-202ENST00000397238 TRIM44Q96DX7 344 aaPredicted RBP24.96■■□□□ 1.59
AGAP3-202ENST00000397238 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
AGAP3-202ENST00000397238 CLCN1P35523 988 aa24.95■■□□□ 1.59
AGAP3-202ENST00000397238 TRIM27P14373 513 aa24.95■■□□□ 1.58
AGAP3-202ENST00000397238 VIRMAQ69YN4 1812 aaKnown RBP24.94■■□□□ 1.58
AGAP3-202ENST00000397238 HSP90AA2PQ14568 343 aaPredicted RBP24.94■■□□□ 1.58
AGAP3-202ENST00000397238 RAPGEF3O95398 923 aa24.93■■□□□ 1.58
AGAP3-202ENST00000397238 SSH1Q8WYL5 1049 aa24.93■■□□□ 1.58
AGAP3-202ENST00000397238 NOB1Q9ULX3 412 aaKnown RBP24.93■■□□□ 1.58
AGAP3-202ENST00000397238 MYOM1P52179 1685 aa24.93■■□□□ 1.58
AGAP3-202ENST00000397238 AAMPQ13685 434 aa24.92■■□□□ 1.58
AGAP3-202ENST00000397238 KDM5AP29375 1690 aaKnown RBP24.91■■□□□ 1.58
AGAP3-202ENST00000397238 DDX11L8A8MPP1 907 aa24.91■■□□□ 1.58
AGAP3-202ENST00000397238 TNPO1Q92973 898 aaKnown RBP24.91■■□□□ 1.58
AGAP3-202ENST00000397238 ESPNB1AK53 854 aa24.9■■□□□ 1.58
AGAP3-202ENST00000397238 GLIPR1L2Q4G1C9 344 aa24.9■■□□□ 1.58
AGAP3-202ENST00000397238 TMEM57Q8N5G2 664 aa24.9■■□□□ 1.58
AGAP3-202ENST00000397238 ERBB4Q15303 1308 aa24.9■■□□□ 1.58
AGAP3-202ENST00000397238 GAS2L3Q86XJ1 694 aa24.89■■□□□ 1.58
AGAP3-202ENST00000397238 STAC3Q96MF2 364 aa24.89■■□□□ 1.58
AGAP3-202ENST00000397238 ZFYVE16Q7Z3T8 1539 aa24.88■■□□□ 1.57
AGAP3-202ENST00000397238 SLC24A1O60721 1099 aa24.88■■□□□ 1.57
AGAP3-202ENST00000397238 UGGT1Q9NYU2 1555 aa24.88■■□□□ 1.57
AGAP3-202ENST00000397238 DDX19BQ9UMR2 479 aa24.87■■□□□ 1.57
AGAP3-202ENST00000397238 RTEL1-TNFRSF6BF6WH68 1400 aa24.87■■□□□ 1.57
AGAP3-202ENST00000397238 PHF23Q9BUL5 403 aaPredicted RBP24.86■■□□□ 1.57
AGAP3-202ENST00000397238 ATP7AQ04656 1500 aa24.86■■□□□ 1.57
AGAP3-202ENST00000397238 ATF7IPQ6VMQ6 1270 aa24.86■■□□□ 1.57
AGAP3-202ENST00000397238 CLTCL1P53675 1640 aa24.85■■□□□ 1.57
AGAP3-202ENST00000397238 RBM42Q9BTD8 480 aaKnown RBP24.84■■□□□ 1.57
AGAP3-202ENST00000397238 ZNF692Q9BU19 519 aaPredicted RBP24.84■■□□□ 1.57
AGAP3-202ENST00000397238 C1orf115Q9H7X2 142 aa24.84■■□□□ 1.57
AGAP3-202ENST00000397238 ANKRD45Q5TZF3 282 aa24.83■■□□□ 1.57
AGAP3-202ENST00000397238 CYB5RLQ6IPT4 315 aa24.83■■□□□ 1.57
AGAP3-202ENST00000397238 CABP2Q9NPB3 220 aa24.83■■□□□ 1.57
AGAP3-202ENST00000397238 CFAP65Q6ZU64 1925 aaKnown RBP24.82■■□□□ 1.56
AGAP3-202ENST00000397238 GGNBP2Q9H3C7 697 aa24.82■■□□□ 1.56
AGAP3-202ENST00000397238 CD109Q6YHK3 1445 aa24.82■■□□□ 1.56
AGAP3-202ENST00000397238 GBP4Q96PP9 640 aa24.81■■□□□ 1.56
AGAP3-202ENST00000397238 CD2BP2O95400 341 aaKnown RBP24.81■■□□□ 1.56
AGAP3-202ENST00000397238 HDAC1Q13547 482 aaPredicted RBP24.81■■□□□ 1.56
AGAP3-202ENST00000397238 PTPRTO14522 1441 aa24.81■■□□□ 1.56
AGAP3-202ENST00000397238 CEP152O94986 1710 aa24.81■■□□□ 1.56
AGAP3-202ENST00000397238 TRPM2O94759 1503 aa24.8■■□□□ 1.56
AGAP3-202ENST00000397238 CCDC27Q2M243 656 aa24.8■■□□□ 1.56
AGAP3-202ENST00000397238 NCLP19338 710 aaKnown RBP24.79■■□□□ 1.56
AGAP3-202ENST00000397238 TMPOP42166 694 aaKnown RBP24.79■■□□□ 1.56
AGAP3-202ENST00000397238 RIPK4P57078 832 aa24.79■■□□□ 1.56
AGAP3-202ENST00000397238 SPHKAPQ2M3C7 1700 aa24.79■■□□□ 1.56
AGAP3-202ENST00000397238 SMC5Q8IY18 1101 aa24.78■■□□□ 1.56
AGAP3-202ENST00000397238 PKNOX2Q96KN3 472 aa24.78■■□□□ 1.56
AGAP3-202ENST00000397238 ELL2O00472 640 aaPredicted RBP24.78■■□□□ 1.56
AGAP3-202ENST00000397238 CHD1LQ86WJ1 897 aa24.76■■□□□ 1.55
AGAP3-202ENST00000397238 NOS1P29475 1434 aa24.76■■□□□ 1.55
AGAP3-202ENST00000397238 SSFA2P28290 1259 aa24.76■■□□□ 1.55
AGAP3-202ENST00000397238 ZMYND15Q9H091 742 aa24.76■■□□□ 1.55
AGAP3-202ENST00000397238 STK26Q9P289 416 aa24.76■■□□□ 1.55
AGAP3-202ENST00000397238 ZBTB40Q9NUA8 1239 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms