RNA–Protein interactions for RNA: ENST00000397012.6

PPARG-206, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-206ENST00000397012 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
PPARG-206ENST00000397012 KNSTRNQ9Y448 316 aa18.22■□□□□ 0.51
PPARG-206ENST00000397012 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
PPARG-206ENST00000397012 SAFB2Q14151 953 aaKnown RBP eCLIP18.2■□□□□ 0.5
PPARG-206ENST00000397012 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
PPARG-206ENST00000397012 BCANQ96GW7 911 aa18.19■□□□□ 0.5
PPARG-206ENST00000397012 TBX22Q9Y458 520 aa18.19■□□□□ 0.5
PPARG-206ENST00000397012 NINLQ9Y2I6 1382 aa18.19■□□□□ 0.5
PPARG-206ENST00000397012 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
PPARG-206ENST00000397012 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
PPARG-206ENST00000397012 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
PPARG-206ENST00000397012 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
PPARG-206ENST00000397012 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
PPARG-206ENST00000397012 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
PPARG-206ENST00000397012 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
PPARG-206ENST00000397012 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
PPARG-206ENST00000397012 ATAD2Q6PL18 1390 aa18.16■□□□□ 0.5
PPARG-206ENST00000397012 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
PPARG-206ENST00000397012 NLRP13Q86W25 1043 aa18.15■□□□□ 0.5
PPARG-206ENST00000397012 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
PPARG-206ENST00000397012 ANKRD36BQ8N2N9 1353 aa18.14■□□□□ 0.49
PPARG-206ENST00000397012 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
PPARG-206ENST00000397012 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.49
PPARG-206ENST00000397012 ROBO2Q9HCK4 1378 aa18.13■□□□□ 0.49
PPARG-206ENST00000397012 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
PPARG-206ENST00000397012 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
PPARG-206ENST00000397012 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
PPARG-206ENST00000397012 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
PPARG-206ENST00000397012 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
PPARG-206ENST00000397012 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
PPARG-206ENST00000397012 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
PPARG-206ENST00000397012 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
PPARG-206ENST00000397012 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
PPARG-206ENST00000397012 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
PPARG-206ENST00000397012 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
PPARG-206ENST00000397012 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
PPARG-206ENST00000397012 WASLO00401 505 aaPredicted RBP18.09■□□□□ 0.49
PPARG-206ENST00000397012 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.49
PPARG-206ENST00000397012 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
PPARG-206ENST00000397012 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
PPARG-206ENST00000397012 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
PPARG-206ENST00000397012 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
PPARG-206ENST00000397012 ATP7BP35670 1465 aa18.05■□□□□ 0.48
PPARG-206ENST00000397012 TERF2IPQ9NYB0 399 aa18.05■□□□□ 0.48
PPARG-206ENST00000397012 NSD2O96028 1365 aa18.05■□□□□ 0.48
PPARG-206ENST00000397012 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
PPARG-206ENST00000397012 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
PPARG-206ENST00000397012 INSRP06213 1382 aa18.02■□□□□ 0.48
PPARG-206ENST00000397012 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.47
PPARG-206ENST00000397012 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
PPARG-206ENST00000397012 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
PPARG-206ENST00000397012 TOPAZ1Q8N9V7 1692 aa18■□□□□ 0.47
PPARG-206ENST00000397012 HDGFL2Q7Z4V5 671 aaPredicted RBP18■□□□□ 0.47
PPARG-206ENST00000397012 NUDT16Q96DE0 195 aaKnown RBP18■□□□□ 0.47
PPARG-206ENST00000397012 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
PPARG-206ENST00000397012 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
PPARG-206ENST00000397012 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
PPARG-206ENST00000397012 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
PPARG-206ENST00000397012 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
PPARG-206ENST00000397012 KCNA6P17658 529 aa17.98■□□□□ 0.47
PPARG-206ENST00000397012 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
PPARG-206ENST00000397012 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
PPARG-206ENST00000397012 KIF20BQ96Q89 1820 aa17.97■□□□□ 0.47
PPARG-206ENST00000397012 MON2Q7Z3U7 1717 aa17.97■□□□□ 0.47
PPARG-206ENST00000397012 ITSN1Q15811 1721 aa17.96■□□□□ 0.47
PPARG-206ENST00000397012 KDM4FA0A1W2PPD8 638 aa17.96■□□□□ 0.47
PPARG-206ENST00000397012 FYB1O15117 783 aa17.95■□□□□ 0.46
PPARG-206ENST00000397012 POLR3AO14802 1390 aaPredicted RBP17.95■□□□□ 0.46
PPARG-206ENST00000397012 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PPARG-206ENST00000397012 NCKAP5LQ9HCH0 1330 aa17.94■□□□□ 0.46
PPARG-206ENST00000397012 BLMP54132 1417 aaPredicted RBP17.94■□□□□ 0.46
PPARG-206ENST00000397012 EDC4Q6P2E9 1401 aaKnown RBP17.94■□□□□ 0.46
PPARG-206ENST00000397012 NWD1Q149M9 1564 aa17.94■□□□□ 0.46
PPARG-206ENST00000397012 PLEKHG3A1L390 1219 aa17.93■□□□□ 0.46
PPARG-206ENST00000397012 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
PPARG-206ENST00000397012 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
PPARG-206ENST00000397012 GTF3C3Q9Y5Q9 886 aa17.91■□□□□ 0.46
PPARG-206ENST00000397012 NALCNQ8IZF0 1738 aa17.91■□□□□ 0.46
PPARG-206ENST00000397012 RGPD8O14715 1765 aaPredicted RBP17.91■□□□□ 0.46
PPARG-206ENST00000397012 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
PPARG-206ENST00000397012 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
PPARG-206ENST00000397012 NRKQ7Z2Y5 1582 aa17.9■□□□□ 0.46
PPARG-206ENST00000397012 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
PPARG-206ENST00000397012 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
PPARG-206ENST00000397012 SHPRHQ149N8 1683 aa17.88■□□□□ 0.45
PPARG-206ENST00000397012 WDR43Q15061 677 aaKnown RBP eCLIP17.87■□□□□ 0.45
PPARG-206ENST00000397012 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
PPARG-206ENST00000397012 MTHFSP49914 203 aa17.86■□□□□ 0.45
PPARG-206ENST00000397012 ACEP12821 1306 aa17.86■□□□□ 0.45
PPARG-206ENST00000397012 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
PPARG-206ENST00000397012 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
PPARG-206ENST00000397012 USP6P35125 1406 aa17.85■□□□□ 0.45
PPARG-206ENST00000397012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.84■□□□□ 0.459e-7■□□□□ 11.3
PPARG-206ENST00000397012 SSH2Q76I76 1423 aa17.84■□□□□ 0.45
PPARG-206ENST00000397012 NUTM2FA1L443 756 aa17.84■□□□□ 0.45
PPARG-206ENST00000397012 CFAP53Q96M91 514 aa17.82■□□□□ 0.44
PPARG-206ENST00000397012 MAP2P11137 1827 aaKnown RBP17.82■□□□□ 0.44
PPARG-206ENST00000397012 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
PPARG-206ENST00000397012 NME9Q86XW9 330 aa17.81■□□□□ 0.44
PPARG-206ENST00000397012 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms