RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 PODXL2Q9NZ53 605 aa13.79□□□□□ -0.2
TUBB-208ENST00000396389 CABP2Q9NPB3 220 aa13.78□□□□□ -0.2
TUBB-208ENST00000396389 ADAMTS13Q76LX8 1427 aa13.78□□□□□ -0.2
TUBB-208ENST00000396389 NPM2Q86SE8 214 aaKnown RBP13.78□□□□□ -0.2
TUBB-208ENST00000396389 PLEKHG1Q9ULL1 1385 aa13.78□□□□□ -0.2
TUBB-208ENST00000396389 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.2
TUBB-208ENST00000396389 TMC1Q8TDI8 760 aa13.77□□□□□ -0.2
TUBB-208ENST00000396389 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.21
TUBB-208ENST00000396389 ZNF335Q9H4Z2 1342 aaPredicted RBP13.77□□□□□ -0.21
TUBB-208ENST00000396389 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
TUBB-208ENST00000396389 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.21
TUBB-208ENST00000396389 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
TUBB-208ENST00000396389 NPHP4O75161 1426 aaPredicted RBP13.76□□□□□ -0.21
TUBB-208ENST00000396389 YTHDC2Q9H6S0 1430 aaKnown RBP13.76□□□□□ -0.21
TUBB-208ENST00000396389 ZBTB47Q9UFB7 747 aaPredicted RBP13.76□□□□□ -0.21
TUBB-208ENST00000396389 TRPM1Q7Z4N2 1603 aa13.76□□□□□ -0.21
TUBB-208ENST00000396389 TESK2Q96S53 571 aa13.76□□□□□ -0.21
TUBB-208ENST00000396389 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
TUBB-208ENST00000396389 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
TUBB-208ENST00000396389 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
TUBB-208ENST00000396389 ROBO2Q9HCK4 1378 aa13.75□□□□□ -0.21
TUBB-208ENST00000396389 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
TUBB-208ENST00000396389 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
TUBB-208ENST00000396389 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
TUBB-208ENST00000396389 ARHGAP23Q9P227 1491 aa13.75□□□□□ -0.21
TUBB-208ENST00000396389 PTPRUQ92729 1446 aa13.74□□□□□ -0.21
TUBB-208ENST00000396389 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
TUBB-208ENST00000396389 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
TUBB-208ENST00000396389 ASXL1Q8IXJ9 1541 aa13.74□□□□□ -0.21
TUBB-208ENST00000396389 SLIT1O75093 1534 aa13.74□□□□□ -0.21
TUBB-208ENST00000396389 IQGAP1P46940 1657 aa13.73□□□□□ -0.21
TUBB-208ENST00000396389 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
TUBB-208ENST00000396389 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
TUBB-208ENST00000396389 PRKRIP1Q9H875 184 aaPredicted RBP13.73□□□□□ -0.21
TUBB-208ENST00000396389 GPRASP1Q5JY77 1395 aa13.72□□□□□ -0.21
TUBB-208ENST00000396389 TMF1P82094 1093 aa13.72□□□□□ -0.21
TUBB-208ENST00000396389 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
TUBB-208ENST00000396389 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
TUBB-208ENST00000396389 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
TUBB-208ENST00000396389 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
TUBB-208ENST00000396389 CDK19Q9BWU1 502 aa13.7□□□□□ -0.22
TUBB-208ENST00000396389 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
TUBB-208ENST00000396389 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
TUBB-208ENST00000396389 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
TUBB-208ENST00000396389 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
TUBB-208ENST00000396389 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
TUBB-208ENST00000396389 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
TUBB-208ENST00000396389 ZNF142P52746 1687 aaPredicted RBP13.67□□□□□ -0.22
TUBB-208ENST00000396389 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
TUBB-208ENST00000396389 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
TUBB-208ENST00000396389 SETBP1Q9Y6X0 1596 aa13.65□□□□□ -0.22
TUBB-208ENST00000396389 NEFMP07197 916 aa13.65□□□□□ -0.22
TUBB-208ENST00000396389 CABP1Q9NZU7 370 aa13.65□□□□□ -0.22
TUBB-208ENST00000396389 PANK3Q9H999 370 aa13.65□□□□□ -0.22
TUBB-208ENST00000396389 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
TUBB-208ENST00000396389 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
TUBB-208ENST00000396389 DDX17Q92841 729 aaKnown RBP13.63□□□□□ -0.23
TUBB-208ENST00000396389 MED14O60244 1454 aa13.63□□□□□ -0.23
TUBB-208ENST00000396389 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
TUBB-208ENST00000396389 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
TUBB-208ENST00000396389 WASLO00401 505 aaPredicted RBP13.63□□□□□ -0.23
TUBB-208ENST00000396389 SKAP1Q86WV1 359 aa13.62□□□□□ -0.23
TUBB-208ENST00000396389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
TUBB-208ENST00000396389 SOX12O15370 315 aa13.61□□□□□ -0.23
TUBB-208ENST00000396389 KDM5AP29375 1690 aaKnown RBP13.61□□□□□ -0.23
TUBB-208ENST00000396389 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
TUBB-208ENST00000396389 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
TUBB-208ENST00000396389 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
TUBB-208ENST00000396389 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
TUBB-208ENST00000396389 PRR36Q9H6K5 1346 aa13.6□□□□□ -0.23
TUBB-208ENST00000396389 STRCQ7RTU9 1775 aa13.6□□□□□ -0.23
TUBB-208ENST00000396389 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
TUBB-208ENST00000396389 LMOD2Q6P5Q4 547 aa13.59□□□□□ -0.23
TUBB-208ENST00000396389 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
TUBB-208ENST00000396389 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.23
TUBB-208ENST00000396389 ATF3P18847 181 aa13.58□□□□□ -0.24
TUBB-208ENST00000396389 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
TUBB-208ENST00000396389 FOXO3O43524 673 aa13.57□□□□□ -0.24
TUBB-208ENST00000396389 PIP4K2BP78356 416 aa13.57□□□□□ -0.24
TUBB-208ENST00000396389 POLR1AO95602 1720 aaPredicted RBP13.57□□□□□ -0.24
TUBB-208ENST00000396389 FBLN1P23142 703 aa13.57□□□□□ -0.24
TUBB-208ENST00000396389 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
TUBB-208ENST00000396389 ARHGEF28Q8N1W1 1705 aaKnown RBP13.57□□□□□ -0.24
TUBB-208ENST00000396389 CDCA8Q53HL2 280 aa13.57□□□□□ -0.24
TUBB-208ENST00000396389 TULP4Q9NRJ4 1543 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 LAMC1P11047 1609 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 QRICH2Q9H0J4 1663 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 KIAA1210Q9ULL0 1709 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 SLC4A3P48751 1232 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
TUBB-208ENST00000396389 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
TUBB-208ENST00000396389 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
TUBB-208ENST00000396389 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
TUBB-208ENST00000396389 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
TUBB-208ENST00000396389 PDE4AP27815 886 aa13.53□□□□□ -0.24
TUBB-208ENST00000396389 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
TUBB-208ENST00000396389 TECPR2O15040 1411 aa13.53□□□□□ -0.24
TUBB-208ENST00000396389 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
TUBB-208ENST00000396389 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms