RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 IQGAP3Q86VI3 1631 aa18.16■□□□□ 0.5
CLIP2-203ENST00000395060 U2AF1L5P0DN76 240 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-203ENST00000395060 U2AF1Q01081 240 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLIP2-203ENST00000395060 ITPRIPQ8IWB1 547 aa18.16■□□□□ 0.5
CLIP2-203ENST00000395060 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-203ENST00000395060 MTHFSP49914 203 aa18.15■□□□□ 0.5
CLIP2-203ENST00000395060 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
CLIP2-203ENST00000395060 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
CLIP2-203ENST00000395060 TMEM132EQ6IEE7 984 aa18.13■□□□□ 0.49
CLIP2-203ENST00000395060 U2SURPO15042 1029 aaKnown RBP18.13■□□□□ 0.49
CLIP2-203ENST00000395060 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
CLIP2-203ENST00000395060 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
CLIP2-203ENST00000395060 RAPGEF3O95398 923 aa18.12■□□□□ 0.49
CLIP2-203ENST00000395060 ATP10AO60312 1499 aa18.11■□□□□ 0.49
CLIP2-203ENST00000395060 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
CLIP2-203ENST00000395060 VSIG10Q8N0Z9 540 aa18.11■□□□□ 0.49
CLIP2-203ENST00000395060 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
CLIP2-203ENST00000395060 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
CLIP2-203ENST00000395060 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
CLIP2-203ENST00000395060 HSCBQ8IWL3 235 aa18.09■□□□□ 0.49
CLIP2-203ENST00000395060 LNPKQ9C0E8 428 aa18.09■□□□□ 0.49
CLIP2-203ENST00000395060 UGGT1Q9NYU2 1555 aa18.09■□□□□ 0.49
CLIP2-203ENST00000395060 RTEL1-TNFRSF6BF6WH68 1400 aa18.09■□□□□ 0.49
CLIP2-203ENST00000395060 CHMP5Q9NZZ3 219 aa18.09■□□□□ 0.49
CLIP2-203ENST00000395060 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.49
CLIP2-203ENST00000395060 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
CLIP2-203ENST00000395060 MVPQ14764 893 aaKnown RBP18.07■□□□□ 0.48
CLIP2-203ENST00000395060 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
CLIP2-203ENST00000395060 ATP7AQ04656 1500 aa18.07■□□□□ 0.48
CLIP2-203ENST00000395060 NSD3Q9BZ95 1437 aa18.07■□□□□ 0.48
CLIP2-203ENST00000395060 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
CLIP2-203ENST00000395060 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
CLIP2-203ENST00000395060 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
CLIP2-203ENST00000395060 GRPEL1Q9HAV7 217 aa18.05■□□□□ 0.48
CLIP2-203ENST00000395060 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
CLIP2-203ENST00000395060 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
CLIP2-203ENST00000395060 TRIM27P14373 513 aa18.04■□□□□ 0.48
CLIP2-203ENST00000395060 C1orf115Q9H7X2 142 aa18.04■□□□□ 0.48
CLIP2-203ENST00000395060 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
CLIP2-203ENST00000395060 HSP90AA2PQ14568 343 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-203ENST00000395060 TRIM44Q96DX7 344 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-203ENST00000395060 CD109Q6YHK3 1445 aa18.03■□□□□ 0.48
CLIP2-203ENST00000395060 GAS2L3Q86XJ1 694 aa18.03■□□□□ 0.48
CLIP2-203ENST00000395060 SSH1Q8WYL5 1049 aa18.03■□□□□ 0.48
CLIP2-203ENST00000395060 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
CLIP2-203ENST00000395060 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
CLIP2-203ENST00000395060 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
CLIP2-203ENST00000395060 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
CLIP2-203ENST00000395060 TMEM57Q8N5G2 664 aa18.01■□□□□ 0.47
CLIP2-203ENST00000395060 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
CLIP2-203ENST00000395060 TNPO1Q92973 898 aaKnown RBP18.01■□□□□ 0.47
CLIP2-203ENST00000395060 PTPRTO14522 1441 aa18■□□□□ 0.47
CLIP2-203ENST00000395060 ELL2O00472 640 aaPredicted RBP18■□□□□ 0.47
CLIP2-203ENST00000395060 SYNMO15061 1565 aa18■□□□□ 0.47
CLIP2-203ENST00000395060 MRE11P49959 708 aa18■□□□□ 0.47
CLIP2-203ENST00000395060 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
CLIP2-203ENST00000395060 ESPNB1AK53 854 aa17.99■□□□□ 0.47
CLIP2-203ENST00000395060 CD2BP2O95400 341 aaKnown RBP17.99■□□□□ 0.47
CLIP2-203ENST00000395060 CLCN1P35523 988 aa17.99■□□□□ 0.47
CLIP2-203ENST00000395060 ARID3AQ99856 593 aa17.99■□□□□ 0.47
CLIP2-203ENST00000395060 TRPM2O94759 1503 aa17.99■□□□□ 0.47
CLIP2-203ENST00000395060 GGNBP2Q9H3C7 697 aa17.98■□□□□ 0.47
CLIP2-203ENST00000395060 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
CLIP2-203ENST00000395060 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
CLIP2-203ENST00000395060 MADDQ8WXG6 1647 aa17.97■□□□□ 0.47
CLIP2-203ENST00000395060 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
CLIP2-203ENST00000395060 WDR63Q8IWG1 891 aa17.97■□□□□ 0.47
CLIP2-203ENST00000395060 LAMC1P11047 1609 aa17.97■□□□□ 0.47
CLIP2-203ENST00000395060 FBLN1P23142 703 aa17.96■□□□□ 0.47
CLIP2-203ENST00000395060 ANKRD45Q5TZF3 282 aa17.96■□□□□ 0.47
CLIP2-203ENST00000395060 STK26Q9P289 416 aa17.96■□□□□ 0.47
CLIP2-203ENST00000395060 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.47
CLIP2-203ENST00000395060 NINLQ9Y2I6 1382 aa17.96■□□□□ 0.47
CLIP2-203ENST00000395060 ABCA9Q8IUA7 1624 aa17.95■□□□□ 0.46
CLIP2-203ENST00000395060 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
CLIP2-203ENST00000395060 PKNOX2Q96KN3 472 aa17.95■□□□□ 0.46
CLIP2-203ENST00000395060 ARAP3Q8WWN8 1544 aa17.95■□□□□ 0.46
CLIP2-203ENST00000395060 NOS1P29475 1434 aa17.95■□□□□ 0.46
CLIP2-203ENST00000395060 DDX11L8A8MPP1 907 aa17.94■□□□□ 0.46
CLIP2-203ENST00000395060 ATF7IPQ6VMQ6 1270 aa17.94■□□□□ 0.46
CLIP2-203ENST00000395060 SPHKAPQ2M3C7 1700 aa17.94■□□□□ 0.46
CLIP2-203ENST00000395060 ZMYND15Q9H091 742 aa17.94■□□□□ 0.46
CLIP2-203ENST00000395060 RNF17Q9BXT8 1623 aaKnown RBP17.93■□□□□ 0.46
CLIP2-203ENST00000395060 MYOM1P52179 1685 aa17.93■□□□□ 0.46
CLIP2-203ENST00000395060 GLIPR1L2Q4G1C9 344 aa17.93■□□□□ 0.46
CLIP2-203ENST00000395060 INO80Q9ULG1 1556 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-203ENST00000395060 SSFA2P28290 1259 aa17.93■□□□□ 0.46
CLIP2-203ENST00000395060 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-203ENST00000395060 ZNF518AQ6AHZ1 1483 aa17.93■□□□□ 0.46
CLIP2-203ENST00000395060 NGEFQ8N5V2 710 aa17.92■□□□□ 0.46
CLIP2-203ENST00000395060 THUMPD2Q9BTF0 503 aaKnown RBP17.92■□□□□ 0.46
CLIP2-203ENST00000395060 APBB1O00213 710 aa17.92■□□□□ 0.46
CLIP2-203ENST00000395060 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
CLIP2-203ENST00000395060 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
CLIP2-203ENST00000395060 IQGAP1P46940 1657 aa17.92■□□□□ 0.46
CLIP2-203ENST00000395060 RIPK4P57078 832 aa17.92■□□□□ 0.46
CLIP2-203ENST00000395060 TET3O43151 1660 aa17.91■□□□□ 0.46
CLIP2-203ENST00000395060 FOXD4L5Q5VV16 416 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-203ENST00000395060 FOXD4L4Q8WXT5 416 aaPredicted RBP17.9■□□□□ 0.46
CLIP2-203ENST00000395060 KDM5AP29375 1690 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms