RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TRAK1Q9UPV9 953 aa20.49■□□□□ 0.87
CPSF7-202ENST00000394888 SPATA31D1Q6ZQQ2 1576 aa20.48■□□□□ 0.87
CPSF7-202ENST00000394888 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
CPSF7-202ENST00000394888 SLFN5Q08AF3 891 aa20.48■□□□□ 0.87
CPSF7-202ENST00000394888 IDI1Q13907 227 aa20.48■□□□□ 0.87
CPSF7-202ENST00000394888 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
CPSF7-202ENST00000394888 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
CPSF7-202ENST00000394888 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
CPSF7-202ENST00000394888 VIRMAQ69YN4 1812 aaKnown RBP20.45■□□□□ 0.86
CPSF7-202ENST00000394888 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
CPSF7-202ENST00000394888 CRBNQ96SW2 442 aa20.44■□□□□ 0.86
CPSF7-202ENST00000394888 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
CPSF7-202ENST00000394888 MYT1Q01538 1121 aa20.43■□□□□ 0.86
CPSF7-202ENST00000394888 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
CPSF7-202ENST00000394888 SKAP1Q86WV1 359 aa20.42■□□□□ 0.86
CPSF7-202ENST00000394888 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
CPSF7-202ENST00000394888 ANKRD36BQ8N2N9 1353 aa20.41■□□□□ 0.86
CPSF7-202ENST00000394888 ARHGEF40Q8TER5 1519 aa20.41■□□□□ 0.86
CPSF7-202ENST00000394888 PUS7Q96PZ0 661 aaKnown RBP20.4■□□□□ 0.86
CPSF7-202ENST00000394888 SLC24A1O60721 1099 aa20.39■□□□□ 0.86
CPSF7-202ENST00000394888 APAF1O14727 1248 aa20.39■□□□□ 0.85
CPSF7-202ENST00000394888 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
CPSF7-202ENST00000394888 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.85
CPSF7-202ENST00000394888 A2ML1A8K2U0 1454 aa20.37■□□□□ 0.85
CPSF7-202ENST00000394888 A0A1W2PP64 1363 aa20.37■□□□□ 0.85
CPSF7-202ENST00000394888 KNDC1Q76NI1 1749 aa20.37■□□□□ 0.85
CPSF7-202ENST00000394888 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
CPSF7-202ENST00000394888 ABCC11Q96J66 1382 aa20.36■□□□□ 0.85
CPSF7-202ENST00000394888 FBXO31Q5XUX0 539 aaPredicted RBP20.36■□□□□ 0.85
CPSF7-202ENST00000394888 YTHDC2Q9H6S0 1430 aaKnown RBP20.36■□□□□ 0.85
CPSF7-202ENST00000394888 DLC1Q96QB1 1528 aa20.35■□□□□ 0.85
CPSF7-202ENST00000394888 MED14O60244 1454 aa20.35■□□□□ 0.85
CPSF7-202ENST00000394888 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
CPSF7-202ENST00000394888 CDC42BPGQ6DT37 1551 aa20.33■□□□□ 0.85
CPSF7-202ENST00000394888 SLC52A1Q9NWF4 448 aa20.33■□□□□ 0.84
CPSF7-202ENST00000394888 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
CPSF7-202ENST00000394888 WWC1Q8IX03 1113 aa20.31■□□□□ 0.84
CPSF7-202ENST00000394888 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
CPSF7-202ENST00000394888 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
CPSF7-202ENST00000394888 NSD2O96028 1365 aa20.3■□□□□ 0.84
CPSF7-202ENST00000394888 CABP2Q9NPB3 220 aa20.3■□□□□ 0.84
CPSF7-202ENST00000394888 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
CPSF7-202ENST00000394888 BCAR3O75815 825 aa20.29■□□□□ 0.84
CPSF7-202ENST00000394888 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
CPSF7-202ENST00000394888 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
CPSF7-202ENST00000394888 BACH2Q9BYV9 841 aa20.28■□□□□ 0.84
CPSF7-202ENST00000394888 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
CPSF7-202ENST00000394888 MTHFSP49914 203 aa20.25■□□□□ 0.83
CPSF7-202ENST00000394888 NINLQ9Y2I6 1382 aa20.25■□□□□ 0.83
CPSF7-202ENST00000394888 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
CPSF7-202ENST00000394888 C3P01024 1663 aa20.24■□□□□ 0.83
CPSF7-202ENST00000394888 PLEKHF1Q96S99 279 aa20.24■□□□□ 0.83
CPSF7-202ENST00000394888 NRKQ7Z2Y5 1582 aa20.24■□□□□ 0.83
CPSF7-202ENST00000394888 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
CPSF7-202ENST00000394888 MORC1Q86VD1 984 aa20.24■□□□□ 0.83
CPSF7-202ENST00000394888 E9PSI1 815 aa20.23■□□□□ 0.83
CPSF7-202ENST00000394888 TOPAZ1Q8N9V7 1692 aa20.23■□□□□ 0.83
CPSF7-202ENST00000394888 PNPLA6Q8IY17 1366 aa20.23■□□□□ 0.83
CPSF7-202ENST00000394888 PDE4AP27815 886 aa20.23■□□□□ 0.83
CPSF7-202ENST00000394888 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
CPSF7-202ENST00000394888 MS4A1P11836 297 aa20.22■□□□□ 0.83
CPSF7-202ENST00000394888 TNNT2P45379 298 aaPredicted RBP20.22■□□□□ 0.83
CPSF7-202ENST00000394888 CPS1P31327 1500 aa20.21■□□□□ 0.83
CPSF7-202ENST00000394888 DLG5Q8TDM6 1919 aa20.21■□□□□ 0.83
CPSF7-202ENST00000394888 LRRC7Q96NW7 1537 aa20.2■□□□□ 0.82
CPSF7-202ENST00000394888 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
CPSF7-202ENST00000394888 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
CPSF7-202ENST00000394888 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
CPSF7-202ENST00000394888 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
CPSF7-202ENST00000394888 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
CPSF7-202ENST00000394888 FYB1O15117 783 aa20.19■□□□□ 0.82
CPSF7-202ENST00000394888 SAFB2Q14151 953 aaKnown RBP eCLIP20.19■□□□□ 0.82
CPSF7-202ENST00000394888 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.19■□□□□ 0.82
CPSF7-202ENST00000394888 IPO9Q96P70 1041 aaKnown RBP20.18■□□□□ 0.82
CPSF7-202ENST00000394888 RIMS2Q9UQ26 1411 aa20.18■□□□□ 0.82
CPSF7-202ENST00000394888 SENP3Q9H4L4 574 aaPredicted RBP20.17■□□□□ 0.82
CPSF7-202ENST00000394888 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
CPSF7-202ENST00000394888 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
CPSF7-202ENST00000394888 STK26Q9P289 416 aa20.17■□□□□ 0.82
CPSF7-202ENST00000394888 ATP7BP35670 1465 aa20.17■□□□□ 0.82
CPSF7-202ENST00000394888 CPSF1Q10570 1443 aaKnown RBP20.17■□□□□ 0.82
CPSF7-202ENST00000394888 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
CPSF7-202ENST00000394888 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
CPSF7-202ENST00000394888 ITSN1Q15811 1721 aa20.16■□□□□ 0.82
CPSF7-202ENST00000394888 ATAD2Q6PL18 1390 aa20.15■□□□□ 0.82
CPSF7-202ENST00000394888 IGHDP01880 384 aa20.15■□□□□ 0.82
CPSF7-202ENST00000394888 METP08581 1390 aa20.15■□□□□ 0.82
CPSF7-202ENST00000394888 C8orf34Q49A92 452 aa20.15■□□□□ 0.82
CPSF7-202ENST00000394888 TECPR2O15040 1411 aa20.15■□□□□ 0.82
CPSF7-202ENST00000394888 NALCNQ8IZF0 1738 aa20.14■□□□□ 0.82
CPSF7-202ENST00000394888 MINK1Q8N4C8 1332 aaPredicted RBP20.14■□□□□ 0.81
CPSF7-202ENST00000394888 RARSP54136 660 aaKnown RBP20.13■□□□□ 0.81
CPSF7-202ENST00000394888 CENPQQ7L2Z9 268 aaPredicted RBP20.13■□□□□ 0.81
CPSF7-202ENST00000394888 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
CPSF7-202ENST00000394888 RLBP1P12271 317 aa20.13■□□□□ 0.81
CPSF7-202ENST00000394888 TRIM35Q9UPQ4 493 aa20.13■□□□□ 0.81
CPSF7-202ENST00000394888 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
CPSF7-202ENST00000394888 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
CPSF7-202ENST00000394888 CDK19Q9BWU1 502 aa20.1■□□□□ 0.81
CPSF7-202ENST00000394888 RGPD1P0DJD0 1748 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms