RNA–Protein interactions for RNA: ENST00000394884.7

CDC23-201, Transcript of cell division cycle 23, humanhuman

TSL 1 (best) BASIC

Gene CDC23, Length 1,079 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-201ENST00000394884 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
CDC23-201ENST00000394884 CDC42BPAQ5VT25 1732 aa16.6■□□□□ 0.25
CDC23-201ENST00000394884 BCANQ96GW7 911 aa16.6■□□□□ 0.25
CDC23-201ENST00000394884 TRPC5Q9UL62 973 aaPredicted RBP16.6■□□□□ 0.25
CDC23-201ENST00000394884 NWD1Q149M9 1564 aa16.6■□□□□ 0.25
CDC23-201ENST00000394884 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
CDC23-201ENST00000394884 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
CDC23-201ENST00000394884 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
CDC23-201ENST00000394884 ABCC3O15438 1527 aa16.59■□□□□ 0.25
CDC23-201ENST00000394884 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.24
CDC23-201ENST00000394884 DIP2AQ14689 1571 aa16.58■□□□□ 0.24
CDC23-201ENST00000394884 UBR1Q8IWV7 1749 aa16.58■□□□□ 0.24
CDC23-201ENST00000394884 BLMP54132 1417 aaPredicted RBP16.57■□□□□ 0.24
CDC23-201ENST00000394884 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
CDC23-201ENST00000394884 ATF3P18847 181 aa16.57■□□□□ 0.24
CDC23-201ENST00000394884 MAMSTRQ6ZN01 415 aa16.57■□□□□ 0.24
CDC23-201ENST00000394884 SF3B2Q13435 895 aaKnown RBP16.56■□□□□ 0.24
CDC23-201ENST00000394884 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
CDC23-201ENST00000394884 LRRC59Q96AG4 307 aaKnown RBP16.55■□□□□ 0.24
CDC23-201ENST00000394884 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
CDC23-201ENST00000394884 COLQQ9Y215 455 aaPredicted RBP16.54■□□□□ 0.24
CDC23-201ENST00000394884 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
CDC23-201ENST00000394884 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
CDC23-201ENST00000394884 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
CDC23-201ENST00000394884 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.23
CDC23-201ENST00000394884 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
CDC23-201ENST00000394884 C19orf44Q9H6X5 657 aa16.51■□□□□ 0.23
CDC23-201ENST00000394884 PNPLA6Q8IY17 1366 aa16.51■□□□□ 0.23
CDC23-201ENST00000394884 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
CDC23-201ENST00000394884 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
CDC23-201ENST00000394884 TET3O43151 1660 aa16.5■□□□□ 0.23
CDC23-201ENST00000394884 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
CDC23-201ENST00000394884 ATRNO75882 1429 aa16.49■□□□□ 0.23
CDC23-201ENST00000394884 MAST1Q9Y2H9 1570 aa16.49■□□□□ 0.23
CDC23-201ENST00000394884 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
CDC23-201ENST00000394884 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
CDC23-201ENST00000394884 PSEN1P49768 467 aa16.48■□□□□ 0.23
CDC23-201ENST00000394884 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
CDC23-201ENST00000394884 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
CDC23-201ENST00000394884 EP400Q96L91 3159 aa16.48■□□□□ 0.23
CDC23-201ENST00000394884 PLCG2P16885 1265 aa16.47■□□□□ 0.23
CDC23-201ENST00000394884 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
CDC23-201ENST00000394884 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
CDC23-201ENST00000394884 PDAP1Q13442 181 aaKnown RBP16.46■□□□□ 0.23
CDC23-201ENST00000394884 ZNF784Q8NCA9 323 aaPredicted RBP16.46■□□□□ 0.23
CDC23-201ENST00000394884 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
CDC23-201ENST00000394884 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
CDC23-201ENST00000394884 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
CDC23-201ENST00000394884 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
CDC23-201ENST00000394884 IRX5P78411 483 aaPredicted RBP16.43■□□□□ 0.22
CDC23-201ENST00000394884 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CDC23-201ENST00000394884 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
CDC23-201ENST00000394884 IDI1Q13907 227 aa16.4■□□□□ 0.22
CDC23-201ENST00000394884 BAG6P46379 1132 aa16.39■□□□□ 0.21
CDC23-201ENST00000394884 OCEL1Q9H607 264 aa16.39■□□□□ 0.21
CDC23-201ENST00000394884 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
CDC23-201ENST00000394884 PIK3C2BO00750 1634 aa16.37■□□□□ 0.21
CDC23-201ENST00000394884 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
CDC23-201ENST00000394884 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
CDC23-201ENST00000394884 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
CDC23-201ENST00000394884 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
CDC23-201ENST00000394884 MROH1Q8NDA8 1641 aa16.36■□□□□ 0.21
CDC23-201ENST00000394884 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
CDC23-201ENST00000394884 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
CDC23-201ENST00000394884 CCDC141Q6ZP82 1450 aa16.33■□□□□ 0.2
CDC23-201ENST00000394884 PTCH1Q13635 1447 aa16.32■□□□□ 0.2
CDC23-201ENST00000394884 SEPT12Q8IYM1 358 aa16.32■□□□□ 0.2
CDC23-201ENST00000394884 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
CDC23-201ENST00000394884 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
CDC23-201ENST00000394884 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
CDC23-201ENST00000394884 MST1RQ04912 1400 aa16.3■□□□□ 0.2
CDC23-201ENST00000394884 CFAP65Q6ZU64 1925 aaKnown RBP16.3■□□□□ 0.2
CDC23-201ENST00000394884 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
CDC23-201ENST00000394884 PLEKHG1Q9ULL1 1385 aa16.29■□□□□ 0.2
CDC23-201ENST00000394884 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
CDC23-201ENST00000394884 EEA1Q15075 1411 aa16.28■□□□□ 0.2
CDC23-201ENST00000394884 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
CDC23-201ENST00000394884 CABP2Q9NPB3 220 aa16.28■□□□□ 0.2
CDC23-201ENST00000394884 UNC13BO14795 1591 aa16.27■□□□□ 0.2
CDC23-201ENST00000394884 RIOK3O14730 519 aaKnown RBP16.27■□□□□ 0.2
CDC23-201ENST00000394884 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.2
CDC23-201ENST00000394884 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
CDC23-201ENST00000394884 RALGAPBQ86X10 1494 aa16.27■□□□□ 0.19
CDC23-201ENST00000394884 CHD2O14647 1828 aaKnown RBP16.26■□□□□ 0.19
CDC23-201ENST00000394884 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDC23-201ENST00000394884 CEP152O94986 1710 aa16.25■□□□□ 0.19
CDC23-201ENST00000394884 UNC5CLQ8IV45 518 aa16.24■□□□□ 0.19
CDC23-201ENST00000394884 PDCD7Q8N8D1 485 aaKnown RBP16.24■□□□□ 0.19
CDC23-201ENST00000394884 MTUS2Q5JR59 1369 aa16.24■□□□□ 0.19
CDC23-201ENST00000394884 DCCP43146 1447 aa16.23■□□□□ 0.19
CDC23-201ENST00000394884 EZH2Q15910 746 aaKnown RBP16.22■□□□□ 0.19
CDC23-201ENST00000394884 RNF25Q96BH1 459 aaPredicted RBP16.22■□□□□ 0.19
CDC23-201ENST00000394884 SOS2Q07890 1332 aaPredicted RBP16.21■□□□□ 0.19
CDC23-201ENST00000394884 HDGFP51858 240 aaKnown RBP16.21■□□□□ 0.19
CDC23-201ENST00000394884 GLI3P10071 1580 aa16.21■□□□□ 0.18
CDC23-201ENST00000394884 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
CDC23-201ENST00000394884 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
CDC23-201ENST00000394884 ZFYVE9O95405 1425 aa16.19■□□□□ 0.18
CDC23-201ENST00000394884 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
CDC23-201ENST00000394884 A0A0G2JS52 829 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms