RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TULP2O00295 520 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 ANKRD30BQ9BXX2 1392 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 GABPB1Q06547 395 aaPredicted RBP15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 NAA30Q147X3 362 aaPredicted RBP15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 TERF2Q15554 542 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 CGNL1Q0VF96 1302 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 PIBF1Q8WXW3 757 aa15.41■□□□□ 0.06
SLC28A1-203ENST00000394573 PKP1Q13835 747 aa15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 GPT2Q8TD30 523 aa15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 FEZ2Q9UHY8 353 aaPredicted RBP15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 CFAP43Q8NDM7 1665 aa15.4■□□□□ 0.06
SLC28A1-203ENST00000394573 FEZ1Q99689 392 aa15.39■□□□□ 0.05
SLC28A1-203ENST00000394573 ST7Q9NRC1 585 aa15.39■□□□□ 0.05
SLC28A1-203ENST00000394573 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
SLC28A1-203ENST00000394573 PATL2C9JE40 543 aaKnown RBP15.39■□□□□ 0.05
SLC28A1-203ENST00000394573 TMEM63CQ9P1W3 806 aa15.39■□□□□ 0.05
SLC28A1-203ENST00000394573 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
SLC28A1-203ENST00000394573 BCL2L13Q9BXK5 485 aa15.38■□□□□ 0.05
SLC28A1-203ENST00000394573 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
SLC28A1-203ENST00000394573 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
SLC28A1-203ENST00000394573 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
SLC28A1-203ENST00000394573 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
SLC28A1-203ENST00000394573 MMP14P50281 582 aa15.37■□□□□ 0.05
SLC28A1-203ENST00000394573 CALCOCO1Q9P1Z2 691 aa15.37■□□□□ 0.05
SLC28A1-203ENST00000394573 RSPH14Q9UHP6 348 aa15.37■□□□□ 0.05
SLC28A1-203ENST00000394573 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 PMFBP1Q8TBY8 1022 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 RLBP1P12271 317 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 LRSAM1Q6UWE0 723 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 HECW1Q76N89 1606 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 NCBP1Q09161 790 aaKnown RBP15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 SNX21Q969T3 373 aa15.36■□□□□ 0.05
SLC28A1-203ENST00000394573 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
SLC28A1-203ENST00000394573 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
SLC28A1-203ENST00000394573 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
SLC28A1-203ENST00000394573 TOMM22Q9NS69 142 aa15.34■□□□□ 0.05
SLC28A1-203ENST00000394573 GYS2P54840 703 aa15.34■□□□□ 0.05
SLC28A1-203ENST00000394573 HNRNPH2P55795 449 aaKnown RBP15.34■□□□□ 0.05
SLC28A1-203ENST00000394573 PLCB2Q00722 1185 aa15.34■□□□□ 0.05
SLC28A1-203ENST00000394573 USP25Q9UHP3 1055 aa15.34■□□□□ 0.05
SLC28A1-203ENST00000394573 ZNF521Q96K83 1311 aa15.33■□□□□ 0.05
SLC28A1-203ENST00000394573 CLGNO14967 610 aa15.33■□□□□ 0.04
SLC28A1-203ENST00000394573 CHAF1AQ13111 956 aaPredicted RBP15.33■□□□□ 0.04
SLC28A1-203ENST00000394573 FAM193AP78312 1265 aa15.33■□□□□ 0.04
SLC28A1-203ENST00000394573 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
SLC28A1-203ENST00000394573 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
SLC28A1-203ENST00000394573 GEMIN8Q9NWZ8 242 aaKnown RBP15.32■□□□□ 0.04
SLC28A1-203ENST00000394573 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
SLC28A1-203ENST00000394573 APAF1O14727 1248 aa15.32■□□□□ 0.04
SLC28A1-203ENST00000394573 RAD51AP2Q09MP3 1159 aa15.32■□□□□ 0.04
SLC28A1-203ENST00000394573 PDE3AQ14432 1141 aa15.32■□□□□ 0.04
SLC28A1-203ENST00000394573 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
SLC28A1-203ENST00000394573 KDM5CP41229 1560 aa15.31■□□□□ 0.04
SLC28A1-203ENST00000394573 NINLQ9Y2I6 1382 aa15.31■□□□□ 0.04
SLC28A1-203ENST00000394573 KIF2CQ99661 725 aa15.31■□□□□ 0.04
SLC28A1-203ENST00000394573 GTF2A1P52655 376 aaPredicted RBP15.3■□□□□ 0.04
SLC28A1-203ENST00000394573 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
SLC28A1-203ENST00000394573 GPATCH11Q8N954 259 aa15.3■□□□□ 0.04
SLC28A1-203ENST00000394573 RWDD1Q9H446 243 aaPredicted RBP15.3■□□□□ 0.04
SLC28A1-203ENST00000394573 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
SLC28A1-203ENST00000394573 BCCIPQ9P287 314 aaKnown RBP eCLIP15.3■□□□□ 0.04
SLC28A1-203ENST00000394573 PYCARDQ9ULZ3 195 aa15.29■□□□□ 0.04
SLC28A1-203ENST00000394573 NKTRP30414 1462 aaKnown RBP15.29■□□□□ 0.04
SLC28A1-203ENST00000394573 KIF18AQ8NI77 898 aa15.28■□□□□ 0.04
SLC28A1-203ENST00000394573 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
SLC28A1-203ENST00000394573 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
SLC28A1-203ENST00000394573 KRT222Q8N1A0 295 aa15.28■□□□□ 0.04
SLC28A1-203ENST00000394573 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLC28A1-203ENST00000394573 V9GYY5 206 aaPredicted RBP15.28■□□□□ 0.04
SLC28A1-203ENST00000394573 CFTRP13569 1480 aa15.27■□□□□ 0.04
SLC28A1-203ENST00000394573 FOXD4L6Q3SYB3 417 aaPredicted RBP15.27■□□□□ 0.04
SLC28A1-203ENST00000394573 FOXD4L3Q6VB84 417 aaPredicted RBP15.27■□□□□ 0.04
SLC28A1-203ENST00000394573 TRIM66O15016 1216 aa15.27■□□□□ 0.03
SLC28A1-203ENST00000394573 YY1AP1Q9H869 796 aa15.27■□□□□ 0.03
SLC28A1-203ENST00000394573 SPTLC3Q9NUV7 552 aa15.27■□□□□ 0.03
SLC28A1-203ENST00000394573 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.03
SLC28A1-203ENST00000394573 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 ADCY5O95622 1261 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 C10orf67Q8IYJ2 551 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 BANK1Q8NDB2 785 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 TSPY26PQ9H489 355 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 DHX16O60231 1041 aaKnown RBP15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 CLEC17AQ6ZS10 378 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 TSPYL1Q9H0U9 437 aa15.26■□□□□ 0.03
SLC28A1-203ENST00000394573 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
SLC28A1-203ENST00000394573 EFCC1Q9HA90 598 aa15.25■□□□□ 0.03
SLC28A1-203ENST00000394573 NOP2P46087 812 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms