RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 SAFB2Q14151 953 aaKnown RBP eCLIP30.33■■■□□ 2.45
CACNB1-203ENST00000394310 PLEKHH1Q9ULM0 1364 aa30.33■■■□□ 2.45
CACNB1-203ENST00000394310 PTCH1Q13635 1447 aa30.32■■■□□ 2.44
CACNB1-203ENST00000394310 ROBO2Q9HCK4 1378 aa30.32■■■□□ 2.44
CACNB1-203ENST00000394310 KTN1Q86UP2 1357 aaKnown RBP30.31■■■□□ 2.44
CACNB1-203ENST00000394310 AMOTL2Q9Y2J4 779 aa30.31■■■□□ 2.44
CACNB1-203ENST00000394310 NPHP4O75161 1426 aaPredicted RBP30.31■■■□□ 2.44
CACNB1-203ENST00000394310 NCKAP5LQ9HCH0 1330 aa30.31■■■□□ 2.44
CACNB1-203ENST00000394310 MINK1Q8N4C8 1332 aaPredicted RBP30.3■■■□□ 2.44
CACNB1-203ENST00000394310 NINLQ9Y2I6 1382 aa30.29■■■□□ 2.44
CACNB1-203ENST00000394310 XRN1Q8IZH2 1706 aaKnown RBP30.28■■■□□ 2.44
CACNB1-203ENST00000394310 ATAD2Q6PL18 1390 aa30.27■■■□□ 2.44
CACNB1-203ENST00000394310 HSPA2P54652 639 aa30.27■■■□□ 2.44
CACNB1-203ENST00000394310 CDK19Q9BWU1 502 aa30.25■■■□□ 2.43
CACNB1-203ENST00000394310 CHD2O14647 1828 aaKnown RBP30.24■■■□□ 2.43
CACNB1-203ENST00000394310 CABP2Q9NPB3 220 aa30.23■■■□□ 2.43
CACNB1-203ENST00000394310 ADGRB2O60241 1585 aa30.22■■■□□ 2.43
CACNB1-203ENST00000394310 NPC1L1Q9UHC9 1359 aa30.22■■■□□ 2.43
CACNB1-203ENST00000394310 WASLO00401 505 aaPredicted RBP30.22■■■□□ 2.43
CACNB1-203ENST00000394310 SRPK2P78362 688 aaKnown RBP30.22■■■□□ 2.43
CACNB1-203ENST00000394310 RALBP1Q15311 655 aa30.22■■■□□ 2.43
CACNB1-203ENST00000394310 LMTK3Q96Q04 1460 aa30.21■■■□□ 2.43
CACNB1-203ENST00000394310 KNSTRNQ9Y448 316 aa30.2■■■□□ 2.43
CACNB1-203ENST00000394310 SLC12A5Q9H2X9 1139 aa30.2■■■□□ 2.42
CACNB1-203ENST00000394310 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.18■■■□□ 2.42
CACNB1-203ENST00000394310 PARD3Q8TEW0 1356 aa30.17■■■□□ 2.42
CACNB1-203ENST00000394310 KCNA6P17658 529 aa30.16■■■□□ 2.42
CACNB1-203ENST00000394310 AMER1Q5JTC6 1135 aaPredicted RBP30.16■■■□□ 2.42
CACNB1-203ENST00000394310 TMC1Q8TDI8 760 aa30.16■■■□□ 2.42
CACNB1-203ENST00000394310 ANKRD36BQ8N2N9 1353 aa30.16■■■□□ 2.42
CACNB1-203ENST00000394310 CARD14Q9BXL6 1004 aa30.15■■■□□ 2.42
CACNB1-203ENST00000394310 NWD1Q149M9 1564 aa30.1■■■□□ 2.41
CACNB1-203ENST00000394310 TERF2IPQ9NYB0 399 aa30.08■■■□□ 2.41
CACNB1-203ENST00000394310 MYBBP1AQ9BQG0 1328 aaKnown RBP30.07■■■□□ 2.4
CACNB1-203ENST00000394310 USP32Q8NFA0 1604 aa30.07■■■□□ 2.4
CACNB1-203ENST00000394310 CCDC61Q9Y6R9 512 aa30.07■■■□□ 2.4
CACNB1-203ENST00000394310 CD163L1Q9NR16 1453 aa30.06■■■□□ 2.4
CACNB1-203ENST00000394310 ATP7BP35670 1465 aa30.06■■■□□ 2.4
CACNB1-203ENST00000394310 NUDT16Q96DE0 195 aaKnown RBP30.05■■■□□ 2.4
CACNB1-203ENST00000394310 CABP1Q9NZU7 370 aa30.05■■■□□ 2.4
CACNB1-203ENST00000394310 A0A1W2PP64 1363 aa30.04■■■□□ 2.4
CACNB1-203ENST00000394310 CC2D1BQ5T0F9 858 aaKnown RBP30.04■■■□□ 2.4
CACNB1-203ENST00000394310 NSD3Q9BZ95 1437 aa30.03■■■□□ 2.4
CACNB1-203ENST00000394310 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
CACNB1-203ENST00000394310 STRCQ7RTU9 1775 aa30■■■□□ 2.39
CACNB1-203ENST00000394310 NKTRP30414 1462 aaKnown RBP30■■■□□ 2.39
CACNB1-203ENST00000394310 BRD4O60885 1362 aaPredicted RBP30■■■□□ 2.39
CACNB1-203ENST00000394310 CPSF1Q10570 1443 aaKnown RBP29.99■■■□□ 2.39
CACNB1-203ENST00000394310 PPIP5K1Q6PFW1 1433 aa29.99■■■□□ 2.39
CACNB1-203ENST00000394310 CGNL1Q0VF96 1302 aa29.99■■■□□ 2.39
CACNB1-203ENST00000394310 PRR36Q9H6K5 1346 aa29.99■■■□□ 2.39
CACNB1-203ENST00000394310 NLRP13Q86W25 1043 aa29.99■■■□□ 2.39
CACNB1-203ENST00000394310 NSD2O96028 1365 aa29.99■■■□□ 2.39
CACNB1-203ENST00000394310 CCDC184Q52MB2 194 aa29.98■■■□□ 2.39
CACNB1-203ENST00000394310 MRS2Q9HD23 443 aa29.98■■■□□ 2.39
CACNB1-203ENST00000394310 CNGB1Q14028 1251 aaPredicted RBP29.97■■■□□ 2.39
CACNB1-203ENST00000394310 PLEKHG3A1L390 1219 aa29.96■■■□□ 2.39
CACNB1-203ENST00000394310 TOPAZ1Q8N9V7 1692 aa29.96■■■□□ 2.39
CACNB1-203ENST00000394310 ANKARQ7Z5J8 1434 aa29.96■■■□□ 2.39
CACNB1-203ENST00000394310 CDC42BPGQ6DT37 1551 aa29.95■■■□□ 2.39
CACNB1-203ENST00000394310 ADGRL3Q9HAR2 1447 aa29.94■■■□□ 2.38
CACNB1-203ENST00000394310 ZNF692Q9BU19 519 aaPredicted RBP29.94■■■□□ 2.38
CACNB1-203ENST00000394310 NCOA3Q9Y6Q9 1424 aa29.92■■■□□ 2.38
CACNB1-203ENST00000394310 NALCNQ8IZF0 1738 aa29.92■■■□□ 2.38
CACNB1-203ENST00000394310 FMN2Q9NZ56 1722 aa29.91■■■□□ 2.38
CACNB1-203ENST00000394310 RBM33Q96EV2 1170 aaKnown RBP29.9■■■□□ 2.38
CACNB1-203ENST00000394310 PPP2R1AP30153 589 aa29.89■■■□□ 2.38
CACNB1-203ENST00000394310 ITSN1Q15811 1721 aa29.89■■■□□ 2.37
CACNB1-203ENST00000394310 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.37
CACNB1-203ENST00000394310 PROSER2Q86WR7 435 aaPredicted RBP29.88■■■□□ 2.37
CACNB1-203ENST00000394310 AKAP12Q02952 1782 aa29.87■■■□□ 2.37
CACNB1-203ENST00000394310 YTHDC1Q96MU7 727 aaKnown RBP29.87■■■□□ 2.37
CACNB1-203ENST00000394310 DMRT2Q9Y5R5 561 aa29.86■■■□□ 2.37
CACNB1-203ENST00000394310 MON2Q7Z3U7 1717 aa29.85■■■□□ 2.37
CACNB1-203ENST00000394310 PNISRQ8TF01 805 aaKnown RBP29.85■■■□□ 2.37
CACNB1-203ENST00000394310 FYB1O15117 783 aa29.85■■■□□ 2.37
CACNB1-203ENST00000394310 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
CACNB1-203ENST00000394310 MORC1Q86VD1 984 aa29.84■■■□□ 2.37
CACNB1-203ENST00000394310 POLR3AO14802 1390 aaPredicted RBP29.83■■■□□ 2.37
CACNB1-203ENST00000394310 ACEP12821 1306 aa29.82■■■□□ 2.36
CACNB1-203ENST00000394310 C19orf44Q9H6X5 657 aa29.81■■■□□ 2.36
CACNB1-203ENST00000394310 NUTM2FA1L443 756 aa29.8■■■□□ 2.36
CACNB1-203ENST00000394310 ANKRD26Q9UPS8 1709 aa29.8■■■□□ 2.36
CACNB1-203ENST00000394310 C14orf37Q86TY3 774 aa29.8■■■□□ 2.36
CACNB1-203ENST00000394310 RGPD8O14715 1765 aaPredicted RBP29.79■■■□□ 2.36
CACNB1-203ENST00000394310 DCCP43146 1447 aa29.77■■■□□ 2.36
CACNB1-203ENST00000394310 CENPBP07199 599 aaPredicted RBP29.77■■■□□ 2.36
CACNB1-203ENST00000394310 KIF20BQ96Q89 1820 aa29.76■■■□□ 2.36
CACNB1-203ENST00000394310 USP6P35125 1406 aa29.76■■■□□ 2.36
CACNB1-203ENST00000394310 SSH2Q76I76 1423 aa29.76■■■□□ 2.36
CACNB1-203ENST00000394310 TMEM94Q12767 1356 aa29.76■■■□□ 2.35
CACNB1-203ENST00000394310 FAM9BQ8IZU0 186 aa29.75■■■□□ 2.35
CACNB1-203ENST00000394310 ZNF335Q9H4Z2 1342 aaPredicted RBP29.75■■■□□ 2.35
CACNB1-203ENST00000394310 INSRP06213 1382 aa29.74■■■□□ 2.35
CACNB1-203ENST00000394310 GGNBP2Q9H3C7 697 aa29.74■■■□□ 2.35
CACNB1-203ENST00000394310 NRKQ7Z2Y5 1582 aa29.74■■■□□ 2.35
CACNB1-203ENST00000394310 SCAF1Q9H7N4 1312 aaKnown RBP29.72■■■□□ 2.35
CACNB1-203ENST00000394310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.72■■■□□ 2.35
CACNB1-203ENST00000394310 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
CACNB1-203ENST00000394310 TTC21BQ7Z4L5 1316 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms