RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 NLRP1Q9C000 1473 aa24.17■■□□□ 1.46
CLDND1-204ENST00000394185 LTKP29376 864 aa24.17■■□□□ 1.46
CLDND1-204ENST00000394185 SRPK2P78362 688 aaKnown RBP24.16■■□□□ 1.46
CLDND1-204ENST00000394185 BCANQ96GW7 911 aa24.15■■□□□ 1.46
CLDND1-204ENST00000394185 PUS7Q96PZ0 661 aaKnown RBP24.13■■□□□ 1.45
CLDND1-204ENST00000394185 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
CLDND1-204ENST00000394185 ABCC11Q96J66 1382 aa24.12■■□□□ 1.45
CLDND1-204ENST00000394185 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
CLDND1-204ENST00000394185 TXNDC2Q86VQ3 553 aa24.11■■□□□ 1.45
CLDND1-204ENST00000394185 ADAMTS13Q76LX8 1427 aa24.1■■□□□ 1.45
CLDND1-204ENST00000394185 FKBP8Q14318 412 aa24.09■■□□□ 1.45
CLDND1-204ENST00000394185 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
CLDND1-204ENST00000394185 ANKRD36BQ8N2N9 1353 aa24.09■■□□□ 1.45
CLDND1-204ENST00000394185 SALL2Q9Y467 1007 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-204ENST00000394185 A0A1W2PP64 1363 aa24.07■■□□□ 1.44
CLDND1-204ENST00000394185 PLEKHG1Q9ULL1 1385 aa24.05■■□□□ 1.44
CLDND1-204ENST00000394185 TNNT2P45379 298 aaPredicted RBP24.05■■□□□ 1.44
CLDND1-204ENST00000394185 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
CLDND1-204ENST00000394185 SLC26A8Q96RN1 970 aa24.05■■□□□ 1.44
CLDND1-204ENST00000394185 ATAD2Q6PL18 1390 aa24.04■■□□□ 1.44
CLDND1-204ENST00000394185 RIMS1Q86UR5 1692 aaKnown RBP24.04■■□□□ 1.44
CLDND1-204ENST00000394185 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
CLDND1-204ENST00000394185 SLIT1O75093 1534 aa24.03■■□□□ 1.44
CLDND1-204ENST00000394185 CGNL1Q0VF96 1302 aa24.02■■□□□ 1.44
CLDND1-204ENST00000394185 ARHGAP23Q9P227 1491 aa24.02■■□□□ 1.44
CLDND1-204ENST00000394185 BLMP54132 1417 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-204ENST00000394185 MORC1Q86VD1 984 aa24.02■■□□□ 1.44
CLDND1-204ENST00000394185 USP32Q8NFA0 1604 aa24.01■■□□□ 1.43
CLDND1-204ENST00000394185 TECPR2O15040 1411 aa24.01■■□□□ 1.43
CLDND1-204ENST00000394185 CABP1Q9NZU7 370 aa24.01■■□□□ 1.43
CLDND1-204ENST00000394185 EID1Q9Y6B2 187 aa24.01■■□□□ 1.43
CLDND1-204ENST00000394185 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
CLDND1-204ENST00000394185 NINLQ9Y2I6 1382 aa24■■□□□ 1.43
CLDND1-204ENST00000394185 KNDC1Q76NI1 1749 aa23.99■■□□□ 1.43
CLDND1-204ENST00000394185 THEMISQ8N1K5 641 aaPredicted RBP23.99■■□□□ 1.43
CLDND1-204ENST00000394185 MED14O60244 1454 aa23.98■■□□□ 1.43
CLDND1-204ENST00000394185 CPS1P31327 1500 aa23.98■■□□□ 1.43
CLDND1-204ENST00000394185 NEFLP07196 543 aa23.98■■□□□ 1.43
CLDND1-204ENST00000394185 IRX6P78412 446 aaPredicted RBP23.98■■□□□ 1.43
CLDND1-204ENST00000394185 WDR43Q15061 677 aaKnown RBP eCLIP23.98■■□□□ 1.43
CLDND1-204ENST00000394185 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
CLDND1-204ENST00000394185 SMG6Q86US8 1419 aaKnown RBP23.97■■□□□ 1.43
CLDND1-204ENST00000394185 PTPRUQ92729 1446 aa23.97■■□□□ 1.43
CLDND1-204ENST00000394185 WASLO00401 505 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-204ENST00000394185 NUDCQ9Y266 331 aa23.95■■□□□ 1.42
CLDND1-204ENST00000394185 TERF2IPQ9NYB0 399 aa23.95■■□□□ 1.42
CLDND1-204ENST00000394185 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
CLDND1-204ENST00000394185 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
CLDND1-204ENST00000394185 INSRP06213 1382 aa23.94■■□□□ 1.42
CLDND1-204ENST00000394185 ADAMTSL3P82987 1691 aa23.94■■□□□ 1.42
CLDND1-204ENST00000394185 SIRT1Q96EB6 747 aa23.93■■□□□ 1.42
CLDND1-204ENST00000394185 GGNBP2Q9H3C7 697 aa23.93■■□□□ 1.42
CLDND1-204ENST00000394185 FYB1O15117 783 aa23.91■■□□□ 1.42
CLDND1-204ENST00000394185 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
CLDND1-204ENST00000394185 NSD2O96028 1365 aa23.9■■□□□ 1.42
CLDND1-204ENST00000394185 HDGFL2Q7Z4V5 671 aaPredicted RBP23.9■■□□□ 1.42
CLDND1-204ENST00000394185 POLR3AO14802 1390 aaPredicted RBP23.9■■□□□ 1.42
CLDND1-204ENST00000394185 MTHFSP49914 203 aa23.89■■□□□ 1.42
CLDND1-204ENST00000394185 CDCA7LQ96GN5 454 aa23.89■■□□□ 1.42
CLDND1-204ENST00000394185 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
CLDND1-204ENST00000394185 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.89■■□□□ 1.41
CLDND1-204ENST00000394185 NUDT16Q96DE0 195 aaKnown RBP23.88■■□□□ 1.41
CLDND1-204ENST00000394185 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
CLDND1-204ENST00000394185 PPIP5K1Q6PFW1 1433 aa23.88■■□□□ 1.41
CLDND1-204ENST00000394185 PRR36Q9H6K5 1346 aa23.87■■□□□ 1.41
CLDND1-204ENST00000394185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.86■■□□□ 1.41
CLDND1-204ENST00000394185 ATP7BP35670 1465 aa23.86■■□□□ 1.41
CLDND1-204ENST00000394185 SHPRHQ149N8 1683 aa23.84■■□□□ 1.41
CLDND1-204ENST00000394185 NUTM2FA1L443 756 aa23.84■■□□□ 1.41
CLDND1-204ENST00000394185 CCDC61Q9Y6R9 512 aa23.82■■□□□ 1.4
CLDND1-204ENST00000394185 CPSF1Q10570 1443 aaKnown RBP23.82■■□□□ 1.4
CLDND1-204ENST00000394185 ADGRB2O60241 1585 aa23.8■■□□□ 1.4
CLDND1-204ENST00000394185 APAF1O14727 1248 aa23.79■■□□□ 1.4
CLDND1-204ENST00000394185 FBLN1P23142 703 aa23.79■■□□□ 1.4
CLDND1-204ENST00000394185 DIP2AQ14689 1571 aa23.79■■□□□ 1.4
CLDND1-204ENST00000394185 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-204ENST00000394185 PDE3BQ13370 1112 aa23.79■■□□□ 1.4
CLDND1-204ENST00000394185 ANKRD26Q9UPS8 1709 aa23.79■■□□□ 1.4
CLDND1-204ENST00000394185 PTCH1Q13635 1447 aa23.78■■□□□ 1.4
CLDND1-204ENST00000394185 KIF20BQ96Q89 1820 aa23.78■■□□□ 1.4
CLDND1-204ENST00000394185 KCNA6P17658 529 aa23.78■■□□□ 1.4
CLDND1-204ENST00000394185 CDC42BPGQ6DT37 1551 aa23.77■■□□□ 1.4
CLDND1-204ENST00000394185 ANKLE2Q86XL3 938 aa23.76■■□□□ 1.39
CLDND1-204ENST00000394185 ZNF521Q96K83 1311 aa23.76■■□□□ 1.39
CLDND1-204ENST00000394185 NME9Q86XW9 330 aa23.76■■□□□ 1.39
CLDND1-204ENST00000394185 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
CLDND1-204ENST00000394185 XRN1Q8IZH2 1706 aaKnown RBP23.75■■□□□ 1.39
CLDND1-204ENST00000394185 EDC4Q6P2E9 1401 aaKnown RBP23.75■■□□□ 1.39
CLDND1-204ENST00000394185 CFAP53Q96M91 514 aa23.75■■□□□ 1.39
CLDND1-204ENST00000394185 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
CLDND1-204ENST00000394185 NKTRP30414 1462 aaKnown RBP23.72■■□□□ 1.39
CLDND1-204ENST00000394185 SETD1BQ9UPS6 1966 aaKnown RBP23.72■■□□□ 1.39
CLDND1-204ENST00000394185 MON2Q7Z3U7 1717 aa23.71■■□□□ 1.39
CLDND1-204ENST00000394185 COL3A1P02461 1466 aaPredicted RBP23.7■■□□□ 1.39
CLDND1-204ENST00000394185 TOPAZ1Q8N9V7 1692 aa23.7■■□□□ 1.39
CLDND1-204ENST00000394185 ACEP12821 1306 aa23.7■■□□□ 1.38
CLDND1-204ENST00000394185 RBM33Q96EV2 1170 aaKnown RBP23.69■■□□□ 1.38
CLDND1-204ENST00000394185 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
CLDND1-204ENST00000394185 RCAN3Q9UKA8 241 aa23.69■■□□□ 1.38
CLDND1-204ENST00000394185 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms