RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PLEKHH1Q9ULM0 1364 aa12.01□□□□□ -0.49
TDP1-202ENST00000393452 A2ML1A8K2U0 1454 aa12.01□□□□□ -0.49
TDP1-202ENST00000393452 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
TDP1-202ENST00000393452 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
TDP1-202ENST00000393452 NINLQ9Y2I6 1382 aa12□□□□□ -0.49
TDP1-202ENST00000393452 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
TDP1-202ENST00000393452 CGNL1Q0VF96 1302 aa11.98□□□□□ -0.49
TDP1-202ENST00000393452 NSD2O96028 1365 aa11.98□□□□□ -0.49
TDP1-202ENST00000393452 SETD1AO15047 1707 aaKnown RBP11.98□□□□□ -0.49
TDP1-202ENST00000393452 SHPRHQ149N8 1683 aa11.98□□□□□ -0.49
TDP1-202ENST00000393452 MORC1Q86VD1 984 aa11.97□□□□□ -0.49
TDP1-202ENST00000393452 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
TDP1-202ENST00000393452 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
TDP1-202ENST00000393452 STK26Q9P289 416 aa11.97□□□□□ -0.49
TDP1-202ENST00000393452 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
TDP1-202ENST00000393452 DLC1Q96QB1 1528 aa11.97□□□□□ -0.49
TDP1-202ENST00000393452 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
TDP1-202ENST00000393452 RIMS2Q9UQ26 1411 aa11.96□□□□□ -0.49
TDP1-202ENST00000393452 ATAD2Q6PL18 1390 aa11.96□□□□□ -0.5
TDP1-202ENST00000393452 GOLGA2Q08379 1002 aa11.96□□□□□ -0.5
TDP1-202ENST00000393452 CCDC136Q96JN2 1154 aa11.96□□□□□ -0.5
TDP1-202ENST00000393452 TRMT2AQ8IZ69 625 aaKnown RBP11.95□□□□□ -0.5
TDP1-202ENST00000393452 PRAM1Q96QH2 718 aa11.95□□□□□ -0.5
TDP1-202ENST00000393452 ZMYM3Q14202 1370 aa11.95□□□□□ -0.5
TDP1-202ENST00000393452 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
TDP1-202ENST00000393452 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
TDP1-202ENST00000393452 A0A1W2PP64 1363 aa11.94□□□□□ -0.5
TDP1-202ENST00000393452 MLECQ14165 292 aa11.94□□□□□ -0.5
TDP1-202ENST00000393452 NRXN3Q9Y4C0 1643 aa11.94□□□□□ -0.5
TDP1-202ENST00000393452 APAF1O14727 1248 aa11.93□□□□□ -0.5
TDP1-202ENST00000393452 SLFN5Q08AF3 891 aa11.93□□□□□ -0.5
TDP1-202ENST00000393452 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
TDP1-202ENST00000393452 CD163L1Q9NR16 1453 aa11.93□□□□□ -0.5
TDP1-202ENST00000393452 SRPK2P78362 688 aaKnown RBP11.92□□□□□ -0.5
TDP1-202ENST00000393452 EXOC6Q8TAG9 804 aa11.92□□□□□ -0.5
TDP1-202ENST00000393452 POGKQ9P215 609 aa11.92□□□□□ -0.5
TDP1-202ENST00000393452 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
TDP1-202ENST00000393452 MED14O60244 1454 aa11.92□□□□□ -0.5
TDP1-202ENST00000393452 ANKRD26Q9UPS8 1709 aa11.92□□□□□ -0.5
TDP1-202ENST00000393452 MTHFSP49914 203 aa11.91□□□□□ -0.5
TDP1-202ENST00000393452 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
TDP1-202ENST00000393452 NLRP1Q9C000 1473 aa11.91□□□□□ -0.5
TDP1-202ENST00000393452 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.91□□□□□ -0.5
TDP1-202ENST00000393452 IQSEC2Q5JU85 1478 aa11.9□□□□□ -0.5
TDP1-202ENST00000393452 TNNT2P45379 298 aaPredicted RBP11.9□□□□□ -0.5
TDP1-202ENST00000393452 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
TDP1-202ENST00000393452 TERF2IPQ9NYB0 399 aa11.9□□□□□ -0.5
TDP1-202ENST00000393452 CDK19Q9BWU1 502 aa11.89□□□□□ -0.51
TDP1-202ENST00000393452 SPINK5Q9NQ38 1064 aaPredicted RBP11.89□□□□□ -0.51
TDP1-202ENST00000393452 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
TDP1-202ENST00000393452 TNRQ92752 1358 aa11.89□□□□□ -0.51
TDP1-202ENST00000393452 E9PSI1 815 aa11.89□□□□□ -0.51
TDP1-202ENST00000393452 PLIN1O60240 522 aa11.89□□□□□ -0.51
TDP1-202ENST00000393452 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
TDP1-202ENST00000393452 KNDC1Q76NI1 1749 aa11.88□□□□□ -0.51
TDP1-202ENST00000393452 UBR1Q8IWV7 1749 aa11.88□□□□□ -0.51
TDP1-202ENST00000393452 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
TDP1-202ENST00000393452 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
TDP1-202ENST00000393452 FYB1O15117 783 aa11.87□□□□□ -0.51
TDP1-202ENST00000393452 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
TDP1-202ENST00000393452 TECPR2O15040 1411 aa11.87□□□□□ -0.51
TDP1-202ENST00000393452 FANCIQ9NVI1 1328 aa11.87□□□□□ -0.51
TDP1-202ENST00000393452 WWC1Q8IX03 1113 aa11.87□□□□□ -0.51
TDP1-202ENST00000393452 METP08581 1390 aa11.87□□□□□ -0.51
TDP1-202ENST00000393452 ATP7BP35670 1465 aa11.87□□□□□ -0.51
TDP1-202ENST00000393452 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
TDP1-202ENST00000393452 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
TDP1-202ENST00000393452 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
TDP1-202ENST00000393452 WAPLQ7Z5K2 1190 aa11.86□□□□□ -0.51
TDP1-202ENST00000393452 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
TDP1-202ENST00000393452 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
TDP1-202ENST00000393452 COL3A1P02461 1466 aaPredicted RBP11.86□□□□□ -0.51
TDP1-202ENST00000393452 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
TDP1-202ENST00000393452 TMEM2Q9UHN6 1383 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 TCP11L2Q8N4U5 519 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 CRBNQ96SW2 442 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 GGNBP2Q9H3C7 697 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 ADGRB2O60241 1585 aa11.85□□□□□ -0.51
TDP1-202ENST00000393452 CPS1P31327 1500 aa11.84□□□□□ -0.51
TDP1-202ENST00000393452 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
TDP1-202ENST00000393452 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
TDP1-202ENST00000393452 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.83□□□□□ -0.52
TDP1-202ENST00000393452 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
TDP1-202ENST00000393452 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
TDP1-202ENST00000393452 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
TDP1-202ENST00000393452 ADAMTS13Q76LX8 1427 aa11.82□□□□□ -0.52
TDP1-202ENST00000393452 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
TDP1-202ENST00000393452 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
TDP1-202ENST00000393452 TXNDC2Q86VQ3 553 aa11.8□□□□□ -0.52
TDP1-202ENST00000393452 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
TDP1-202ENST00000393452 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
TDP1-202ENST00000393452 PLEKHG1Q9ULL1 1385 aa11.8□□□□□ -0.52
TDP1-202ENST00000393452 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
TDP1-202ENST00000393452 EDC4Q6P2E9 1401 aaKnown RBP11.79□□□□□ -0.52
TDP1-202ENST00000393452 PPIP5K1Q6PFW1 1433 aa11.79□□□□□ -0.52
TDP1-202ENST00000393452 C3P01024 1663 aa11.79□□□□□ -0.52
TDP1-202ENST00000393452 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
TDP1-202ENST00000393452 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms