RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.09□□□□□ -0.15
BRF1-204ENST00000392557 MORC1Q86VD1 984 aa14.08□□□□□ -0.15
BRF1-204ENST00000392557 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.08□□□□□ -0.15
BRF1-204ENST00000392557 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.16
BRF1-204ENST00000392557 PIK3C2GO75747 1445 aa14.08□□□□□ -0.16
BRF1-204ENST00000392557 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
BRF1-204ENST00000392557 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
BRF1-204ENST00000392557 SIGLEC1Q9BZZ2 1709 aa14.06□□□□□ -0.16
BRF1-204ENST00000392557 KDM5AP29375 1690 aaKnown RBP14.05□□□□□ -0.16
BRF1-204ENST00000392557 NSD3Q9BZ95 1437 aa14.05□□□□□ -0.16
BRF1-204ENST00000392557 EVC2Q86UK5 1308 aa14.05□□□□□ -0.16
BRF1-204ENST00000392557 PRAM1Q96QH2 718 aa14.05□□□□□ -0.16
BRF1-204ENST00000392557 ARXQ96QS3 562 aa14.04□□□□□ -0.16
BRF1-204ENST00000392557 USP35Q9P2H5 1018 aa14.04□□□□□ -0.16
BRF1-204ENST00000392557 SYNMO15061 1565 aa14.04□□□□□ -0.16
BRF1-204ENST00000392557 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
BRF1-204ENST00000392557 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
BRF1-204ENST00000392557 APAF1O14727 1248 aa14.03□□□□□ -0.16
BRF1-204ENST00000392557 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
BRF1-204ENST00000392557 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.16
BRF1-204ENST00000392557 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
BRF1-204ENST00000392557 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.17
BRF1-204ENST00000392557 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
BRF1-204ENST00000392557 PPLO60437 1756 aa14.01□□□□□ -0.17
BRF1-204ENST00000392557 FRAT1Q92837 279 aaPredicted RBP14.01□□□□□ -0.17
BRF1-204ENST00000392557 GSE1Q14687 1217 aa14.01□□□□□ -0.17
BRF1-204ENST00000392557 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
BRF1-204ENST00000392557 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
BRF1-204ENST00000392557 FAM161AQ3B820 660 aa14□□□□□ -0.17
BRF1-204ENST00000392557 GLI2P10070 1586 aa14□□□□□ -0.17
BRF1-204ENST00000392557 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
BRF1-204ENST00000392557 NEURL4Q96JN8 1562 aa13.99□□□□□ -0.17
BRF1-204ENST00000392557 CGNL1Q0VF96 1302 aa13.99□□□□□ -0.17
BRF1-204ENST00000392557 GGNBP2Q9H3C7 697 aa13.99□□□□□ -0.17
BRF1-204ENST00000392557 MYOM1P52179 1685 aa13.99□□□□□ -0.17
BRF1-204ENST00000392557 ARHGAP31Q2M1Z3 1444 aa13.99□□□□□ -0.17
BRF1-204ENST00000392557 MTHFSP49914 203 aa13.98□□□□□ -0.17
BRF1-204ENST00000392557 PLEKHH1Q9ULM0 1364 aa13.98□□□□□ -0.17
BRF1-204ENST00000392557 NEXMIFQ5QGS0 1516 aa13.98□□□□□ -0.17
BRF1-204ENST00000392557 ADGRB1O14514 1584 aa13.98□□□□□ -0.17
BRF1-204ENST00000392557 BLMP54132 1417 aaPredicted RBP13.97□□□□□ -0.17
BRF1-204ENST00000392557 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
BRF1-204ENST00000392557 SBNO2Q9Y2G9 1366 aa13.97□□□□□ -0.17
BRF1-204ENST00000392557 PIK3C2BO00750 1634 aa13.97□□□□□ -0.17
BRF1-204ENST00000392557 BCAR3O75815 825 aa13.97□□□□□ -0.17
BRF1-204ENST00000392557 TRHP20396 242 aaPredicted RBP13.97□□□□□ -0.17
BRF1-204ENST00000392557 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
BRF1-204ENST00000392557 SLKQ9H2G2 1235 aaPredicted RBP13.96□□□□□ -0.17
BRF1-204ENST00000392557 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
BRF1-204ENST00000392557 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
BRF1-204ENST00000392557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.95□□□□□ -0.18
BRF1-204ENST00000392557 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
BRF1-204ENST00000392557 U2SURPO15042 1029 aaKnown RBP13.94□□□□□ -0.18
BRF1-204ENST00000392557 CEBPAP49715 358 aaPredicted RBP13.94□□□□□ -0.18
BRF1-204ENST00000392557 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
BRF1-204ENST00000392557 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
BRF1-204ENST00000392557 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
BRF1-204ENST00000392557 U2AF1L5P0DN76 240 aaPredicted RBP13.94□□□□□ -0.18
BRF1-204ENST00000392557 U2AF1Q01081 240 aaKnown RBP eCLIP13.94□□□□□ -0.18
BRF1-204ENST00000392557 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
BRF1-204ENST00000392557 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 SPRYD3Q8NCJ5 442 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 BCL2L13Q9BXK5 485 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 COG6Q9Y2V7 657 aa13.93□□□□□ -0.18
BRF1-204ENST00000392557 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
BRF1-204ENST00000392557 YTHDC2Q9H6S0 1430 aaKnown RBP13.93□□□□□ -0.18
BRF1-204ENST00000392557 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
BRF1-204ENST00000392557 ZC3H13Q5T200 1668 aaKnown RBP13.92□□□□□ -0.18
BRF1-204ENST00000392557 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
BRF1-204ENST00000392557 ZMYM4Q5VZL5 1548 aa13.92□□□□□ -0.18
BRF1-204ENST00000392557 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
BRF1-204ENST00000392557 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
BRF1-204ENST00000392557 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
BRF1-204ENST00000392557 FBLN1P23142 703 aa13.91□□□□□ -0.18
BRF1-204ENST00000392557 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
BRF1-204ENST00000392557 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
BRF1-204ENST00000392557 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
BRF1-204ENST00000392557 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
BRF1-204ENST00000392557 TULP4Q9NRJ4 1543 aa13.9□□□□□ -0.18
BRF1-204ENST00000392557 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
BRF1-204ENST00000392557 ANKRD36BQ8N2N9 1353 aa13.9□□□□□ -0.18
BRF1-204ENST00000392557 UPF2Q9HAU5 1272 aaKnown RBP13.89□□□□□ -0.19
BRF1-204ENST00000392557 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
BRF1-204ENST00000392557 MYO3AQ8NEV4 1616 aa13.89□□□□□ -0.19
BRF1-204ENST00000392557 C8orf34Q49A92 452 aa13.88□□□□□ -0.19
BRF1-204ENST00000392557 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
BRF1-204ENST00000392557 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
BRF1-204ENST00000392557 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
BRF1-204ENST00000392557 BECN1Q14457 450 aa13.87□□□□□ -0.19
BRF1-204ENST00000392557 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
BRF1-204ENST00000392557 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
BRF1-204ENST00000392557 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
BRF1-204ENST00000392557 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
BRF1-204ENST00000392557 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
BRF1-204ENST00000392557 ATAD2Q6PL18 1390 aa13.86□□□□□ -0.19
BRF1-204ENST00000392557 FYB1O15117 783 aa13.86□□□□□ -0.19
BRF1-204ENST00000392557 SLC26A8Q96RN1 970 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms