RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 KNDC1Q76NI1 1749 aa28.83■■■□□ 2.21
SPHK1-202ENST00000392496 SAFB2Q14151 953 aaKnown RBP eCLIP28.83■■■□□ 2.21
SPHK1-202ENST00000392496 ARHGAP23Q9P227 1491 aa28.83■■■□□ 2.21
SPHK1-202ENST00000392496 PLEKHG1Q9ULL1 1385 aa28.83■■■□□ 2.21
SPHK1-202ENST00000392496 NINLQ9Y2I6 1382 aa28.82■■■□□ 2.2
SPHK1-202ENST00000392496 SLC12A5Q9H2X9 1139 aa28.82■■■□□ 2.2
SPHK1-202ENST00000392496 METP08581 1390 aa28.81■■■□□ 2.2
SPHK1-202ENST00000392496 USP32Q8NFA0 1604 aa28.8■■■□□ 2.2
SPHK1-202ENST00000392496 TECPR2O15040 1411 aa28.79■■■□□ 2.2
SPHK1-202ENST00000392496 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
SPHK1-202ENST00000392496 MINK1Q8N4C8 1332 aaPredicted RBP28.79■■■□□ 2.2
SPHK1-202ENST00000392496 ATAD2Q6PL18 1390 aa28.79■■■□□ 2.2
SPHK1-202ENST00000392496 THEMISQ8N1K5 641 aaPredicted RBP28.78■■■□□ 2.2
SPHK1-202ENST00000392496 CABP2Q9NPB3 220 aa28.78■■■□□ 2.2
SPHK1-202ENST00000392496 ADAMTS13Q76LX8 1427 aa28.78■■■□□ 2.2
SPHK1-202ENST00000392496 LTKP29376 864 aa28.78■■■□□ 2.2
SPHK1-202ENST00000392496 PPP2R1AP30153 589 aa28.78■■■□□ 2.2
SPHK1-202ENST00000392496 ANKRD36BQ8N2N9 1353 aa28.77■■■□□ 2.2
SPHK1-202ENST00000392496 NSD3Q9BZ95 1437 aa28.77■■■□□ 2.2
SPHK1-202ENST00000392496 EID1Q9Y6B2 187 aa28.77■■■□□ 2.2
SPHK1-202ENST00000392496 TXNDC2Q86VQ3 553 aa28.76■■■□□ 2.19
SPHK1-202ENST00000392496 FAM135BQ49AJ0 1406 aa28.75■■■□□ 2.19
SPHK1-202ENST00000392496 INSRP06213 1382 aa28.75■■■□□ 2.19
SPHK1-202ENST00000392496 SRPK2P78362 688 aaKnown RBP28.75■■■□□ 2.19
SPHK1-202ENST00000392496 BCANQ96GW7 911 aa28.75■■■□□ 2.19
SPHK1-202ENST00000392496 CPS1P31327 1500 aa28.75■■■□□ 2.19
SPHK1-202ENST00000392496 CEP170BQ9Y4F5 1589 aaPredicted RBP28.74■■■□□ 2.19
SPHK1-202ENST00000392496 MED14O60244 1454 aa28.74■■■□□ 2.19
SPHK1-202ENST00000392496 PLEKHH1Q9ULM0 1364 aa28.72■■■□□ 2.19
SPHK1-202ENST00000392496 WAPLQ7Z5K2 1190 aa28.72■■■□□ 2.19
SPHK1-202ENST00000392496 CDK19Q9BWU1 502 aa28.7■■■□□ 2.19
SPHK1-202ENST00000392496 ZNF142P52746 1687 aaPredicted RBP28.7■■■□□ 2.18
SPHK1-202ENST00000392496 CGNL1Q0VF96 1302 aa28.67■■■□□ 2.18
SPHK1-202ENST00000392496 NSD2O96028 1365 aa28.66■■■□□ 2.18
SPHK1-202ENST00000392496 DIP2AQ14689 1571 aa28.66■■■□□ 2.18
SPHK1-202ENST00000392496 A0A1W2PP64 1363 aa28.64■■■□□ 2.18
SPHK1-202ENST00000392496 TERF2IPQ9NYB0 399 aa28.63■■■□□ 2.17
SPHK1-202ENST00000392496 TBX22Q9Y458 520 aa28.63■■■□□ 2.17
SPHK1-202ENST00000392496 BLMP54132 1417 aaPredicted RBP28.63■■■□□ 2.17
SPHK1-202ENST00000392496 CD163L1Q9NR16 1453 aa28.62■■■□□ 2.17
SPHK1-202ENST00000392496 WASLO00401 505 aaPredicted RBP28.6■■■□□ 2.17
SPHK1-202ENST00000392496 MORC1Q86VD1 984 aa28.6■■■□□ 2.17
SPHK1-202ENST00000392496 LMTK3Q96Q04 1460 aa28.6■■■□□ 2.17
SPHK1-202ENST00000392496 ANKLE2Q86XL3 938 aa28.59■■■□□ 2.17
SPHK1-202ENST00000392496 ROBO2Q9HCK4 1378 aa28.59■■■□□ 2.17
SPHK1-202ENST00000392496 ATP7BP35670 1465 aa28.57■■■□□ 2.16
SPHK1-202ENST00000392496 SLC26A8Q96RN1 970 aa28.57■■■□□ 2.16
SPHK1-202ENST00000392496 PTPRUQ92729 1446 aa28.57■■■□□ 2.16
SPHK1-202ENST00000392496 HDGFL2Q7Z4V5 671 aaPredicted RBP28.57■■■□□ 2.16
SPHK1-202ENST00000392496 ADGRB2O60241 1585 aa28.56■■■□□ 2.16
SPHK1-202ENST00000392496 WDR43Q15061 677 aaKnown RBP eCLIP28.55■■■□□ 2.16
SPHK1-202ENST00000392496 CABP1Q9NZU7 370 aa28.55■■■□□ 2.16
SPHK1-202ENST00000392496 POLR3AO14802 1390 aaPredicted RBP28.54■■■□□ 2.16
SPHK1-202ENST00000392496 SMG6Q86US8 1419 aaKnown RBP28.54■■■□□ 2.16
SPHK1-202ENST00000392496 HSPA2P54652 639 aa28.53■■■□□ 2.16
SPHK1-202ENST00000392496 ANKRD26Q9UPS8 1709 aa28.52■■■□□ 2.16
SPHK1-202ENST00000392496 ADAMTS8Q9UP79 889 aa28.52■■■□□ 2.16
SPHK1-202ENST00000392496 SUPT16HQ9Y5B9 1047 aaKnown RBP28.52■■■□□ 2.16
SPHK1-202ENST00000392496 PTCH1Q13635 1447 aa28.52■■■□□ 2.16
SPHK1-202ENST00000392496 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.51■■■□□ 2.15
SPHK1-202ENST00000392496 NEFLP07196 543 aa28.5■■■□□ 2.15
SPHK1-202ENST00000392496 AMOTL2Q9Y2J4 779 aa28.5■■■□□ 2.15
SPHK1-202ENST00000392496 PIK3R4Q99570 1358 aa28.49■■■□□ 2.15
SPHK1-202ENST00000392496 XRN1Q8IZH2 1706 aaKnown RBP28.48■■■□□ 2.15
SPHK1-202ENST00000392496 PPIP5K1Q6PFW1 1433 aa28.48■■■□□ 2.15
SPHK1-202ENST00000392496 NUDT16Q96DE0 195 aaKnown RBP28.47■■■□□ 2.15
SPHK1-202ENST00000392496 NUDCQ9Y266 331 aa28.47■■■□□ 2.15
SPHK1-202ENST00000392496 KIF20BQ96Q89 1820 aa28.46■■■□□ 2.15
SPHK1-202ENST00000392496 CPSF1Q10570 1443 aaKnown RBP28.46■■■□□ 2.15
SPHK1-202ENST00000392496 CCDC61Q9Y6R9 512 aa28.45■■■□□ 2.15
SPHK1-202ENST00000392496 CDC42BPGQ6DT37 1551 aa28.44■■■□□ 2.14
SPHK1-202ENST00000392496 FYB1O15117 783 aa28.44■■■□□ 2.14
SPHK1-202ENST00000392496 PDE3BQ13370 1112 aa28.44■■■□□ 2.14
SPHK1-202ENST00000392496 DMRT2Q9Y5R5 561 aa28.44■■■□□ 2.14
SPHK1-202ENST00000392496 FKBP8Q14318 412 aa28.43■■■□□ 2.14
SPHK1-202ENST00000392496 TNNT2P45379 298 aaPredicted RBP28.42■■■□□ 2.14
SPHK1-202ENST00000392496 SENP3-EIF4A1A0A087X0R7 540 aa28.41■■■□□ 2.14
SPHK1-202ENST00000392496 NCKAP5LQ9HCH0 1330 aa28.41■■■□□ 2.14
SPHK1-202ENST00000392496 SHPRHQ149N8 1683 aa28.4■■■□□ 2.14
SPHK1-202ENST00000392496 GGNBP2Q9H3C7 697 aa28.4■■■□□ 2.14
SPHK1-202ENST00000392496 EDC4Q6P2E9 1401 aaKnown RBP28.4■■■□□ 2.14
SPHK1-202ENST00000392496 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
SPHK1-202ENST00000392496 TOPAZ1Q8N9V7 1692 aa28.39■■■□□ 2.14
SPHK1-202ENST00000392496 MON2Q7Z3U7 1717 aa28.39■■■□□ 2.14
SPHK1-202ENST00000392496 PRR36Q9H6K5 1346 aa28.39■■■□□ 2.13
SPHK1-202ENST00000392496 MTHFSP49914 203 aa28.39■■■□□ 2.13
SPHK1-202ENST00000392496 CFAP53Q96M91 514 aa28.39■■■□□ 2.13
SPHK1-202ENST00000392496 ITSN1Q15811 1721 aa28.38■■■□□ 2.13
SPHK1-202ENST00000392496 NPHP4O75161 1426 aaPredicted RBP28.36■■■□□ 2.13
SPHK1-202ENST00000392496 ZNF692Q9BU19 519 aaPredicted RBP28.35■■■□□ 2.13
SPHK1-202ENST00000392496 CHD2O14647 1828 aaKnown RBP28.35■■■□□ 2.13
SPHK1-202ENST00000392496 SALL2Q9Y467 1007 aaPredicted RBP28.34■■■□□ 2.13
SPHK1-202ENST00000392496 PLEKHG3A1L390 1219 aa28.32■■■□□ 2.12
SPHK1-202ENST00000392496 KCNA6P17658 529 aa28.31■■■□□ 2.12
SPHK1-202ENST00000392496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.3■■■□□ 2.12
SPHK1-202ENST00000392496 NGEFQ8N5V2 710 aa28.29■■■□□ 2.12
SPHK1-202ENST00000392496 STRCQ7RTU9 1775 aa28.28■■■□□ 2.12
SPHK1-202ENST00000392496 CCDC146Q8IYE0 955 aa28.27■■■□□ 2.12
SPHK1-202ENST00000392496 COL3A1P02461 1466 aaPredicted RBP28.26■■■□□ 2.11
SPHK1-202ENST00000392496 ZNF521Q96K83 1311 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms