RNA–Protein interactions for RNA: ENST00000392347.5

CCDC57-206, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-206ENST00000392347 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
CCDC57-206ENST00000392347 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
CCDC57-206ENST00000392347 ISY1Q9ULR0 285 aaKnown RBP16.86■□□□□ 0.29
CCDC57-206ENST00000392347 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
CCDC57-206ENST00000392347 SSFA2P28290 1259 aa16.86■□□□□ 0.29
CCDC57-206ENST00000392347 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
CCDC57-206ENST00000392347 DDIT3P35638 169 aa16.86■□□□□ 0.29
CCDC57-206ENST00000392347 ITPRIPQ8IWB1 547 aa16.86■□□□□ 0.29
CCDC57-206ENST00000392347 ANP32BQ92688 251 aaKnown RBP16.86■□□□□ 0.29
CCDC57-206ENST00000392347 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
CCDC57-206ENST00000392347 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
CCDC57-206ENST00000392347 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
CCDC57-206ENST00000392347 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
CCDC57-206ENST00000392347 OFD1O75665 1012 aa16.84■□□□□ 0.29
CCDC57-206ENST00000392347 XPCQ01831 940 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-206ENST00000392347 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
CCDC57-206ENST00000392347 TSR2Q969E8 191 aaKnown RBP16.84■□□□□ 0.29
CCDC57-206ENST00000392347 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
CCDC57-206ENST00000392347 PRDM4Q9UKN5 801 aa16.84■□□□□ 0.29
CCDC57-206ENST00000392347 ZKSCAN2Q63HK3 967 aa16.83■□□□□ 0.28
CCDC57-206ENST00000392347 ABCC2Q92887 1545 aa16.82■□□□□ 0.28
CCDC57-206ENST00000392347 SKOR2Q2VWA4 1001 aaPredicted RBP16.82■□□□□ 0.28
CCDC57-206ENST00000392347 CHD1O14646 1710 aa16.82■□□□□ 0.28
CCDC57-206ENST00000392347 CALD1Q05682 793 aaKnown RBP16.82■□□□□ 0.28
CCDC57-206ENST00000392347 SMC5Q8IY18 1101 aa16.82■□□□□ 0.28
CCDC57-206ENST00000392347 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
CCDC57-206ENST00000392347 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
CCDC57-206ENST00000392347 ZHX1Q9UKY1 873 aaPredicted RBP16.8■□□□□ 0.28
CCDC57-206ENST00000392347 PPP1R9BQ96SB3 815 aa16.8■□□□□ 0.28
CCDC57-206ENST00000392347 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.8■□□□□ 0.28
CCDC57-206ENST00000392347 MORC1Q86VD1 984 aa16.8■□□□□ 0.28
CCDC57-206ENST00000392347 AAMPQ13685 434 aa16.79■□□□□ 0.28
CCDC57-206ENST00000392347 TRIM27P14373 513 aa16.79■□□□□ 0.28
CCDC57-206ENST00000392347 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
CCDC57-206ENST00000392347 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
CCDC57-206ENST00000392347 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
CCDC57-206ENST00000392347 CCDC141Q6ZP82 1450 aa16.79■□□□□ 0.28
CCDC57-206ENST00000392347 UQCRHLA0A096LP55 91 aa16.78■□□□□ 0.28
CCDC57-206ENST00000392347 UQCRHP07919 91 aa16.78■□□□□ 0.28
CCDC57-206ENST00000392347 RBM25P49756 843 aaKnown RBP16.78■□□□□ 0.28
CCDC57-206ENST00000392347 NGEFQ8N5V2 710 aa16.78■□□□□ 0.28
CCDC57-206ENST00000392347 SNX21Q969T3 373 aa16.78■□□□□ 0.28
CCDC57-206ENST00000392347 MCTP1Q6DN14 999 aa16.77■□□□□ 0.28
CCDC57-206ENST00000392347 KIF2CQ99661 725 aa16.77■□□□□ 0.28
CCDC57-206ENST00000392347 GOLGA6L22H0YM25 854 aa16.77■□□□□ 0.27
CCDC57-206ENST00000392347 SLC24A1O60721 1099 aa16.77■□□□□ 0.27
CCDC57-206ENST00000392347 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
CCDC57-206ENST00000392347 ZMYM3Q14202 1370 aa16.76■□□□□ 0.27
CCDC57-206ENST00000392347 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-206ENST00000392347 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
CCDC57-206ENST00000392347 BAG4O95429 457 aaKnown RBP16.75■□□□□ 0.27
CCDC57-206ENST00000392347 MTHFSP49914 203 aa16.75■□□□□ 0.27
CCDC57-206ENST00000392347 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
CCDC57-206ENST00000392347 WDR63Q8IWG1 891 aa16.75■□□□□ 0.27
CCDC57-206ENST00000392347 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
CCDC57-206ENST00000392347 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
CCDC57-206ENST00000392347 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
CCDC57-206ENST00000392347 RBSNQ9H1K0 784 aa16.75■□□□□ 0.27
CCDC57-206ENST00000392347 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
CCDC57-206ENST00000392347 MYO5CQ9NQX4 1742 aa16.74■□□□□ 0.27
CCDC57-206ENST00000392347 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
CCDC57-206ENST00000392347 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC57-206ENST00000392347 HDAC1Q13547 482 aaPredicted RBP16.74■□□□□ 0.27
CCDC57-206ENST00000392347 CHAMP1Q96JM3 812 aa16.74■□□□□ 0.27
CCDC57-206ENST00000392347 LAMC1P11047 1609 aa16.73■□□□□ 0.27
CCDC57-206ENST00000392347 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
CCDC57-206ENST00000392347 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
CCDC57-206ENST00000392347 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
CCDC57-206ENST00000392347 RBM27Q9P2N5 1060 aaKnown RBP16.73■□□□□ 0.27
CCDC57-206ENST00000392347 KLHL40Q2TBA0 621 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 JARID2Q92833 1246 aaPredicted RBP16.72■□□□□ 0.27
CCDC57-206ENST00000392347 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
CCDC57-206ENST00000392347 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
CCDC57-206ENST00000392347 PREX2Q70Z35 1606 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 PKP1Q13835 747 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 ANKRD45Q5TZF3 282 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 PRIM1P49642 420 aaKnown RBP16.72■□□□□ 0.27
CCDC57-206ENST00000392347 MPNDQ8N594 471 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 SCAF11Q99590 1463 aaKnown RBP16.72■□□□□ 0.27
CCDC57-206ENST00000392347 SYNMO15061 1565 aa16.72■□□□□ 0.27
CCDC57-206ENST00000392347 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
CCDC57-206ENST00000392347 C1orf115Q9H7X2 142 aa16.71■□□□□ 0.27
CCDC57-206ENST00000392347 SAMD9LQ8IVG5 1584 aa16.71■□□□□ 0.27
CCDC57-206ENST00000392347 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-206ENST00000392347 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
CCDC57-206ENST00000392347 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
CCDC57-206ENST00000392347 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-206ENST00000392347 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
CCDC57-206ENST00000392347 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
CCDC57-206ENST00000392347 NUCB1Q02818 461 aa16.7■□□□□ 0.26
CCDC57-206ENST00000392347 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-206ENST00000392347 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-206ENST00000392347 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
CCDC57-206ENST00000392347 TBC1D9Q6ZT07 1266 aa16.69■□□□□ 0.26
CCDC57-206ENST00000392347 SHROOM2Q13796 1616 aa16.69■□□□□ 0.26
CCDC57-206ENST00000392347 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
CCDC57-206ENST00000392347 TSC1Q92574 1164 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms